RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, human

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRT-208	ENST00000469602	L3MBTL2	Q969R5	705 aa		14.06	□□□□□ -0.16
SRRT-208	ENST00000469602	PCGF6	Q9BYE7	350 aa		14.05	□□□□□ -0.16
SRRT-208	ENST00000469602	C1orf167	Q5SNV9	1468 aa		14.05	□□□□□ -0.16
SRRT-208	ENST00000469602	COL16A1	Q07092	1604 aa	Predicted RBP	14.04	□□□□□ -0.16
SRRT-208	ENST00000469602	PRAM1	Q96QH2	718 aa		14.04	□□□□□ -0.16
SRRT-208	ENST00000469602	NHSL1	Q5SYE7	1610 aa		14.04	□□□□□ -0.16
SRRT-208	ENST00000469602	ARHGEF28	Q8N1W1	1705 aa	Known RBP	14.04	□□□□□ -0.16
SRRT-208	ENST00000469602	TRAK1	Q9UPV9	953 aa		14.03	□□□□□ -0.16
SRRT-208	ENST00000469602	FMN2	Q9NZ56	1722 aa		14.03	□□□□□ -0.16
SRRT-208	ENST00000469602	POGK	Q9P215	609 aa		14.02	□□□□□ -0.17
SRRT-208	ENST00000469602	ADGRB2	O60241	1585 aa		14.01	□□□□□ -0.17
SRRT-208	ENST00000469602	MED1	Q15648	1581 aa	Predicted RBP	14.01	□□□□□ -0.17
SRRT-208	ENST00000469602	TRPM1	Q7Z4N2	1603 aa		14.01	□□□□□ -0.17
SRRT-208	ENST00000469602	SAFB2	Q14151	953 aa	Known RBP eCLIP	14	□□□□□ -0.17
SRRT-208	ENST00000469602	RGPD8	O14715	1765 aa	Predicted RBP	13.99	□□□□□ -0.17
SRRT-208	ENST00000469602	NBPF1	Q3BBV0	1214 aa		13.99	□□□□□ -0.17
SRRT-208	ENST00000469602	ORAI2	Q96SN7	254 aa		13.99	□□□□□ -0.17
SRRT-208	ENST00000469602	TONSL	Q96HA7	1378 aa		13.98	□□□□□ -0.17
SRRT-208	ENST00000469602	JCAD	Q9P266	1359 aa		13.98	□□□□□ -0.17
SRRT-208	ENST00000469602	DISP3	Q9P2K9	1392 aa		13.98	□□□□□ -0.17
SRRT-208	ENST00000469602	SHPRH	Q149N8	1683 aa		13.98	□□□□□ -0.17
SRRT-208	ENST00000469602	KIF1A	Q12756	1690 aa		13.97	□□□□□ -0.17
SRRT-208	ENST00000469602	NUTM2F	A1L443	756 aa		13.96	□□□□□ -0.17
SRRT-208	ENST00000469602	ESCO1	Q5FWF5	840 aa		13.96	□□□□□ -0.17
SRRT-208	ENST00000469602	DDX17	Q92841	729 aa	Known RBP	13.96	□□□□□ -0.17
SRRT-208	ENST00000469602	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.95	□□□□□ -0.18
SRRT-208	ENST00000469602	USP32	Q8NFA0	1604 aa		13.95	□□□□□ -0.18
SRRT-208	ENST00000469602	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.95	□□□□□ -0.18
SRRT-208	ENST00000469602	ANKAR	Q7Z5J8	1434 aa		13.94	□□□□□ -0.18
SRRT-208	ENST00000469602	ROCK2	O75116	1388 aa	Known RBP	13.94	□□□□□ -0.18
SRRT-208	ENST00000469602	NBPF8	Q3BBV2	869 aa		13.93	□□□□□ -0.18
SRRT-208	ENST00000469602	LRRC59	Q96AG4	307 aa	Known RBP	13.93	□□□□□ -0.18
SRRT-208	ENST00000469602	QRICH2	Q9H0J4	1663 aa		13.93	□□□□□ -0.18
SRRT-208	ENST00000469602	EIF3A	Q14152	1382 aa	Known RBP	13.93	□□□□□ -0.18
SRRT-208	ENST00000469602	SOS2	Q07890	1332 aa	Predicted RBP	13.92	□□□□□ -0.18
SRRT-208	ENST00000469602	NPHP3	Q7Z494	1330 aa		13.92	□□□□□ -0.18
SRRT-208	ENST00000469602	TULP4	Q9NRJ4	1543 aa		13.92	□□□□□ -0.18
SRRT-208	ENST00000469602	WASL	O00401	505 aa	Predicted RBP	13.92	□□□□□ -0.18
SRRT-208	ENST00000469602	PXDN	Q92626	1479 aa		13.92	□□□□□ -0.18
SRRT-208	ENST00000469602	SPATA31A6	Q5VVP1	1343 aa		13.91	□□□□□ -0.18
SRRT-208	ENST00000469602	CLSPN	Q9HAW4	1339 aa		13.91	□□□□□ -0.18
SRRT-208	ENST00000469602	FOXO3	O43524	673 aa		13.91	□□□□□ -0.18
SRRT-208	ENST00000469602	GPRASP1	Q5JY77	1395 aa		13.91	□□□□□ -0.18
SRRT-208	ENST00000469602	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.9	□□□□□ -0.18
SRRT-208	ENST00000469602	ITSN1	Q15811	1721 aa		13.9	□□□□□ -0.18
SRRT-208	ENST00000469602	PHF8	Q9UPP1	1060 aa		13.9	□□□□□ -0.18
SRRT-208	ENST00000469602	RALGAPB	Q86X10	1494 aa		13.9	□□□□□ -0.18
SRRT-208	ENST00000469602	PNPLA6	Q8IY17	1366 aa		13.89	□□□□□ -0.19
SRRT-208	ENST00000469602	PHF23	Q9BUL5	403 aa	Predicted RBP	13.89	□□□□□ -0.19
SRRT-208	ENST00000469602	LRP6	O75581	1613 aa		13.89	□□□□□ -0.19
SRRT-208	ENST00000469602	PRR36	Q9H6K5	1346 aa		13.89	□□□□□ -0.19
SRRT-208	ENST00000469602	XPC	Q01831	940 aa	Predicted RBP	13.88	□□□□□ -0.19
SRRT-208	ENST00000469602	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.88	□□□□□ -0.19
SRRT-208	ENST00000469602	ATP7B	P35670	1465 aa		13.87	□□□□□ -0.19
SRRT-208	ENST00000469602	CDK19	Q9BWU1	502 aa		13.87	□□□□□ -0.19
SRRT-208	ENST00000469602	TOPAZ1	Q8N9V7	1692 aa		13.87	□□□□□ -0.19
SRRT-208	ENST00000469602	CARD11	Q9BXL7	1154 aa		13.86	□□□□□ -0.19
SRRT-208	ENST00000469602	KRT28	Q7Z3Y7	464 aa		13.85	□□□□□ -0.19
SRRT-208	ENST00000469602	PMFBP1	Q8TBY8	1022 aa		13.85	□□□□□ -0.19
SRRT-208	ENST00000469602	CCER1	Q8TC90	406 aa	Predicted RBP	13.85	□□□□□ -0.19
SRRT-208	ENST00000469602	NUDT16	Q96DE0	195 aa	Known RBP	13.85	□□□□□ -0.19
SRRT-208	ENST00000469602	TIMELESS	Q9UNS1	1208 aa		13.85	□□□□□ -0.19
SRRT-208	ENST00000469602	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.84	□□□□□ -0.19
SRRT-208	ENST00000469602	NUTM2E	B1AL46	878 aa	Predicted RBP	13.84	□□□□□ -0.19
SRRT-208	ENST00000469602	PSME1	Q06323	249 aa		13.84	□□□□□ -0.19
SRRT-208	ENST00000469602	MEX3C	Q5U5Q3	659 aa	Known RBP	13.84	□□□□□ -0.19
SRRT-208	ENST00000469602	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.84	□□□□□ -0.19
SRRT-208	ENST00000469602	ILDR2	Q71H61	639 aa		13.83	□□□□□ -0.2
SRRT-208	ENST00000469602	RGS17	Q9UGC6	210 aa	Predicted RBP	13.83	□□□□□ -0.2
SRRT-208	ENST00000469602	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.83	□□□□□ -0.2
SRRT-208	ENST00000469602	SPATA31A3	Q5VYP0	1347 aa		13.83	□□□□□ -0.2
SRRT-208	ENST00000469602	SBNO1	A3KN83	1393 aa		13.83	□□□□□ -0.2
SRRT-208	ENST00000469602	TNS3	Q68CZ2	1445 aa		13.82	□□□□□ -0.2
SRRT-208	ENST00000469602	SRPK2	P78362	688 aa	Known RBP	13.82	□□□□□ -0.2
SRRT-208	ENST00000469602	CCDC61	Q9Y6R9	512 aa		13.82	□□□□□ -0.2
SRRT-208	ENST00000469602	NGDN	Q8NEJ9	315 aa	Known RBP	13.81	□□□□□ -0.2
SRRT-208	ENST00000469602	CABP2	Q9NPB3	220 aa		13.81	□□□□□ -0.2
SRRT-208	ENST00000469602	EVC2	Q86UK5	1308 aa		13.81	□□□□□ -0.2
SRRT-208	ENST00000469602	SBNO2	Q9Y2G9	1366 aa		13.81	□□□□□ -0.2
SRRT-208	ENST00000469602	MARF1	Q9Y4F3	1742 aa	Known RBP	13.81	□□□□□ -0.2
SRRT-208	ENST00000469602	ALS2	Q96Q42	1657 aa		13.8	□□□□□ -0.2
SRRT-208	ENST00000469602	PLEKHG3	A1L390	1219 aa		13.79	□□□□□ -0.2
SRRT-208	ENST00000469602	POLR3A	O14802	1390 aa	Predicted RBP	13.79	□□□□□ -0.2
SRRT-208	ENST00000469602	ARHGEF10	O15013	1369 aa		13.79	□□□□□ -0.2
SRRT-208	ENST00000469602	PPIP5K1	Q6PFW1	1433 aa		13.79	□□□□□ -0.2
SRRT-208	ENST00000469602	ABCA3	Q99758	1704 aa		13.78	□□□□□ -0.2
SRRT-208	ENST00000469602	ADAMTS2	O95450	1211 aa		13.77	□□□□□ -0.21
SRRT-208	ENST00000469602	ACE	P12821	1306 aa		13.77	□□□□□ -0.21
SRRT-208	ENST00000469602	C8orf37	Q96NL8	207 aa		13.77	□□□□□ -0.21
SRRT-208	ENST00000469602	ZNF772	Q68DY9	489 aa	Predicted RBP	13.76	□□□□□ -0.21
SRRT-208	ENST00000469602	LMOD2	Q6P5Q4	547 aa		13.76	□□□□□ -0.21
SRRT-208	ENST00000469602	POTEA	Q6S8J7	498 aa		13.76	□□□□□ -0.21
SRRT-208	ENST00000469602	AFF2	P51816	1311 aa		13.75	□□□□□ -0.21
SRRT-208	ENST00000469602	PAK3	O75914	559 aa	Predicted RBP	13.75	□□□□□ -0.21
SRRT-208	ENST00000469602	USP47	Q96K76	1375 aa		13.74	□□□□□ -0.21
SRRT-208	ENST00000469602	CRYBG1	Q9Y4K1	1723 aa		13.74	□□□□□ -0.21
SRRT-208	ENST00000469602	ST20-MTHFS	A0A0A6YYL1	179 aa		13.74	□□□□□ -0.21
SRRT-208	ENST00000469602	NGLY1	Q96IV0	654 aa		13.74	□□□□□ -0.21
SRRT-208	ENST00000469602	CABP1	Q9NZU7	370 aa		13.74	□□□□□ -0.21
SRRT-208	ENST00000469602	AKAP12	Q02952	1782 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms