RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 MROH2AA6NES4 1674 aa23.2■■□□□ 1.3
MCF2L-221ENST00000469415 SYNMO15061 1565 aa23.2■■□□□ 1.3
MCF2L-221ENST00000469415 YEATS2Q9ULM3 1422 aa23.19■■□□□ 1.3
MCF2L-221ENST00000469415 E9PSI1 815 aa23.19■■□□□ 1.3
MCF2L-221ENST00000469415 PRAM1Q96QH2 718 aa23.19■■□□□ 1.3
MCF2L-221ENST00000469415 EVC2Q86UK5 1308 aa23.18■■□□□ 1.3
MCF2L-221ENST00000469415 CGNL1Q0VF96 1302 aa23.18■■□□□ 1.3
MCF2L-221ENST00000469415 SLC24A1O60721 1099 aa23.17■■□□□ 1.3
MCF2L-221ENST00000469415 KIF1BO60333 1816 aa23.16■■□□□ 1.3
MCF2L-221ENST00000469415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.16■■□□□ 1.3
MCF2L-221ENST00000469415 KDM5AP29375 1690 aaKnown RBP23.16■■□□□ 1.3
MCF2L-221ENST00000469415 MYOM2P54296 1465 aa23.15■■□□□ 1.3
MCF2L-221ENST00000469415 CFAP53Q96M91 514 aa23.15■■□□□ 1.3
MCF2L-221ENST00000469415 TSR2Q969E8 191 aaKnown RBP23.13■■□□□ 1.29
MCF2L-221ENST00000469415 RUNDC1Q96C34 613 aa23.13■■□□□ 1.29
MCF2L-221ENST00000469415 MYOM1P52179 1685 aa23.13■■□□□ 1.29
MCF2L-221ENST00000469415 IGHDP01880 384 aa23.12■■□□□ 1.29
MCF2L-221ENST00000469415 FRMPD1Q5SYB0 1578 aa23.12■■□□□ 1.29
MCF2L-221ENST00000469415 WAPLQ7Z5K2 1190 aa23.12■■□□□ 1.29
MCF2L-221ENST00000469415 NPC1L1Q9UHC9 1359 aa23.11■■□□□ 1.29
MCF2L-221ENST00000469415 DEKP35659 375 aaKnown RBP23.11■■□□□ 1.29
MCF2L-221ENST00000469415 CENPQQ7L2Z9 268 aaPredicted RBP23.11■■□□□ 1.29
MCF2L-221ENST00000469415 RTL5Q5HYW3 569 aaPredicted RBP23.09■■□□□ 1.29
MCF2L-221ENST00000469415 TRMT2AQ8IZ69 625 aaKnown RBP23.09■■□□□ 1.29
MCF2L-221ENST00000469415 NKTRP30414 1462 aaKnown RBP23.08■■□□□ 1.29
MCF2L-221ENST00000469415 MLH3Q9UHC1 1453 aa23.08■■□□□ 1.29
MCF2L-221ENST00000469415 CABP1Q9NZU7 370 aa23.08■■□□□ 1.29
MCF2L-221ENST00000469415 RPGRIP1LQ68CZ1 1315 aa23.08■■□□□ 1.28
MCF2L-221ENST00000469415 KDM2BQ8NHM5 1336 aa23.08■■□□□ 1.28
MCF2L-221ENST00000469415 MS4A1P11836 297 aa23.08■■□□□ 1.28
MCF2L-221ENST00000469415 ABCC3O15438 1527 aa23.07■■□□□ 1.28
MCF2L-221ENST00000469415 ADGRB3O60242 1522 aa23.07■■□□□ 1.28
MCF2L-221ENST00000469415 INSRP06213 1382 aa23.06■■□□□ 1.28
MCF2L-221ENST00000469415 RLBP1P12271 317 aa23.06■■□□□ 1.28
MCF2L-221ENST00000469415 POLR3AO14802 1390 aaPredicted RBP23.05■■□□□ 1.28
MCF2L-221ENST00000469415 NUTM2FA1L443 756 aa23.05■■□□□ 1.28
MCF2L-221ENST00000469415 ANO8Q9HCE9 1232 aaPredicted RBP23.04■■□□□ 1.28
MCF2L-221ENST00000469415 HECW2Q9P2P5 1572 aa23.03■■□□□ 1.28
MCF2L-221ENST00000469415 CDK19Q9BWU1 502 aa23.03■■□□□ 1.28
MCF2L-221ENST00000469415 SLC52A1Q9NWF4 448 aa23.03■■□□□ 1.28
MCF2L-221ENST00000469415 DAXXQ9UER7 740 aaPredicted RBP23.03■■□□□ 1.28
MCF2L-221ENST00000469415 A0A1W2PP64 1363 aa23.02■■□□□ 1.28
MCF2L-221ENST00000469415 RARSP54136 660 aaKnown RBP23.02■■□□□ 1.28
MCF2L-221ENST00000469415 SBNO2Q9Y2G9 1366 aa23.01■■□□□ 1.27
MCF2L-221ENST00000469415 NRXN1Q9ULB1 1477 aa23.01■■□□□ 1.27
MCF2L-221ENST00000469415 FYB1O15117 783 aa23.01■■□□□ 1.27
MCF2L-221ENST00000469415 NEFMP07197 916 aa23.01■■□□□ 1.27
MCF2L-221ENST00000469415 NCKAP5LQ9HCH0 1330 aa23.01■■□□□ 1.27
MCF2L-221ENST00000469415 ADGRB1O14514 1584 aa23■■□□□ 1.27
MCF2L-221ENST00000469415 LMTK2Q8IWU2 1503 aa22.99■■□□□ 1.27
MCF2L-221ENST00000469415 MAPK8IP3Q9UPT6 1336 aa22.98■■□□□ 1.27
MCF2L-221ENST00000469415 HMOX1P09601 288 aa22.98■■□□□ 1.27
MCF2L-221ENST00000469415 TERF2IPQ9NYB0 399 aa22.98■■□□□ 1.27
MCF2L-221ENST00000469415 EXOSC9Q06265 439 aaKnown RBP22.97■■□□□ 1.27
MCF2L-221ENST00000469415 FAM161AQ3B820 660 aa22.97■■□□□ 1.27
MCF2L-221ENST00000469415 ANKRD36BQ8N2N9 1353 aa22.97■■□□□ 1.27
MCF2L-221ENST00000469415 C8orf34Q49A92 452 aa22.96■■□□□ 1.27
MCF2L-221ENST00000469415 ZRANB1Q9UGI0 708 aa22.96■■□□□ 1.27
MCF2L-221ENST00000469415 PCDHB15Q9Y5E8 787 aa22.96■■□□□ 1.27
MCF2L-221ENST00000469415 SOX12O15370 315 aa22.95■■□□□ 1.27
MCF2L-221ENST00000469415 TXNDC2Q86VQ3 553 aa22.95■■□□□ 1.27
MCF2L-221ENST00000469415 KIAA1210Q9ULL0 1709 aa22.95■■□□□ 1.27
MCF2L-221ENST00000469415 THUMPD2Q9BTF0 503 aaKnown RBP22.95■■□□□ 1.26
MCF2L-221ENST00000469415 QRICH2Q9H0J4 1663 aa22.95■■□□□ 1.26
MCF2L-221ENST00000469415 SIGLEC1Q9BZZ2 1709 aa22.95■■□□□ 1.26
MCF2L-221ENST00000469415 ELL2O00472 640 aaPredicted RBP22.95■■□□□ 1.26
MCF2L-221ENST00000469415 HDGFL2Q7Z4V5 671 aaPredicted RBP22.95■■□□□ 1.26
MCF2L-221ENST00000469415 FTSJ3Q8IY81 847 aaKnown RBP22.95■■□□□ 1.26
MCF2L-221ENST00000469415 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.26
MCF2L-221ENST00000469415 SMC4Q9NTJ3 1288 aa22.95■■□□□ 1.26
MCF2L-221ENST00000469415 RIPK4P57078 832 aa22.94■■□□□ 1.26
MCF2L-221ENST00000469415 TULP4Q9NRJ4 1543 aa22.93■■□□□ 1.26
MCF2L-221ENST00000469415 GLI2P10070 1586 aa22.92■■□□□ 1.26
MCF2L-221ENST00000469415 SEC24BO95487 1268 aa22.92■■□□□ 1.26
MCF2L-221ENST00000469415 TMPOP42166 694 aaKnown RBP22.92■■□□□ 1.26
MCF2L-221ENST00000469415 PDE3AQ14432 1141 aa22.91■■□□□ 1.26
MCF2L-221ENST00000469415 MYH16Q9H6N6 1097 aa22.91■■□□□ 1.26
MCF2L-221ENST00000469415 DIP2CQ9Y2E4 1556 aa22.91■■□□□ 1.26
MCF2L-221ENST00000469415 IFT172Q9UG01 1749 aa22.9■■□□□ 1.26
MCF2L-221ENST00000469415 PPLO60437 1756 aa22.9■■□□□ 1.26
MCF2L-221ENST00000469415 DIAPH1O60610 1272 aaKnown RBP22.9■■□□□ 1.26
MCF2L-221ENST00000469415 NEO1Q92859 1461 aa22.9■■□□□ 1.26
MCF2L-221ENST00000469415 WDR63Q8IWG1 891 aa22.89■■□□□ 1.26
MCF2L-221ENST00000469415 CAMSAP1Q5T5Y3 1602 aa22.88■■□□□ 1.25
MCF2L-221ENST00000469415 ITPRIPQ8IWB1 547 aa22.88■■□□□ 1.25
MCF2L-221ENST00000469415 EMILIN1Q9Y6C2 1016 aa22.88■■□□□ 1.25
MCF2L-221ENST00000469415 NEXMIFQ5QGS0 1516 aa22.88■■□□□ 1.25
MCF2L-221ENST00000469415 YTHDC2Q9H6S0 1430 aaKnown RBP22.87■■□□□ 1.25
MCF2L-221ENST00000469415 PRKAR2BP31323 418 aa22.87■■□□□ 1.25
MCF2L-221ENST00000469415 NME9Q86XW9 330 aa22.87■■□□□ 1.25
MCF2L-221ENST00000469415 SSH1Q8WYL5 1049 aa22.86■■□□□ 1.25
MCF2L-221ENST00000469415 TRIM35Q9UPQ4 493 aa22.86■■□□□ 1.25
MCF2L-221ENST00000469415 SETBP1Q9Y6X0 1596 aa22.86■■□□□ 1.25
MCF2L-221ENST00000469415 RRS1Q15050 365 aaKnown RBP22.86■■□□□ 1.25
MCF2L-221ENST00000469415 TSPOAP1O95153 1857 aa22.85■■□□□ 1.25
MCF2L-221ENST00000469415 NGEFQ8N5V2 710 aa22.84■■□□□ 1.25
MCF2L-221ENST00000469415 PDZRN3Q9UPQ7 1066 aa22.84■■□□□ 1.25
MCF2L-221ENST00000469415 DDRGK1Q96HY6 314 aa22.83■■□□□ 1.25
MCF2L-221ENST00000469415 ZKSCAN2Q63HK3 967 aa22.83■■□□□ 1.24
MCF2L-221ENST00000469415 DZIP1LQ8IYY4 767 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms