RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 KNDC1Q76NI1 1749 aa11.43□□□□□ -0.58
HDAC6-216ENST00000468949 GPRASP1Q5JY77 1395 aa11.43□□□□□ -0.58
HDAC6-216ENST00000468949 NBPF1Q3BBV0 1214 aa11.43□□□□□ -0.58
HDAC6-216ENST00000468949 TMEM132EQ6IEE7 984 aa11.43□□□□□ -0.58
HDAC6-216ENST00000468949 STK26Q9P289 416 aa11.43□□□□□ -0.58
HDAC6-216ENST00000468949 METP08581 1390 aa11.42□□□□□ -0.58
HDAC6-216ENST00000468949 USP47Q96K76 1375 aa11.42□□□□□ -0.58
HDAC6-216ENST00000468949 EIF4G2P78344 907 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDAC6-216ENST00000468949 YTHDC2Q9H6S0 1430 aaKnown RBP11.42□□□□□ -0.58
HDAC6-216ENST00000468949 LRPPRCP42704 1394 aaKnown RBP11.41□□□□□ -0.58
HDAC6-216ENST00000468949 ADGRB1O14514 1584 aa11.41□□□□□ -0.58
HDAC6-216ENST00000468949 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-216ENST00000468949 TRAK1Q9UPV9 953 aa11.41□□□□□ -0.58
HDAC6-216ENST00000468949 FAM135BQ49AJ0 1406 aa11.41□□□□□ -0.58
HDAC6-216ENST00000468949 ADGRL3Q9HAR2 1447 aa11.41□□□□□ -0.58
HDAC6-216ENST00000468949 ASXL1Q8IXJ9 1541 aa11.4□□□□□ -0.58
HDAC6-216ENST00000468949 HSPA1LP34931 641 aa11.4□□□□□ -0.58
HDAC6-216ENST00000468949 C14orf37Q86TY3 774 aa11.4□□□□□ -0.58
HDAC6-216ENST00000468949 POGKQ9P215 609 aa11.4□□□□□ -0.58
HDAC6-216ENST00000468949 AMOTL2Q9Y2J4 779 aa11.4□□□□□ -0.58
HDAC6-216ENST00000468949 PHLPP1O60346 1717 aa11.39□□□□□ -0.59
HDAC6-216ENST00000468949 RBM33Q96EV2 1170 aaKnown RBP11.39□□□□□ -0.59
HDAC6-216ENST00000468949 CDC42BPGQ6DT37 1551 aa11.38□□□□□ -0.59
HDAC6-216ENST00000468949 AHDC1Q5TGY3 1603 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-216ENST00000468949 CENPJQ9HC77 1338 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-216ENST00000468949 TECPR2O15040 1411 aa11.37□□□□□ -0.59
HDAC6-216ENST00000468949 DLC1Q96QB1 1528 aa11.37□□□□□ -0.59
HDAC6-216ENST00000468949 COL16A1Q07092 1604 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-216ENST00000468949 ABCC11Q96J66 1382 aa11.37□□□□□ -0.59
HDAC6-216ENST00000468949 SLC24A1O60721 1099 aa11.36□□□□□ -0.59
HDAC6-216ENST00000468949 HSPA5P11021 654 aaKnown RBP11.36□□□□□ -0.59
HDAC6-216ENST00000468949 SAFB2Q14151 953 aaKnown RBP eCLIP11.36□□□□□ -0.59
HDAC6-216ENST00000468949 CADPS2Q86UW7 1296 aa11.36□□□□□ -0.59
HDAC6-216ENST00000468949 PRAM1Q96QH2 718 aa11.36□□□□□ -0.59
HDAC6-216ENST00000468949 U3KPZ7 1027 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-216ENST00000468949 ARHGEF28Q8N1W1 1705 aaKnown RBP11.35□□□□□ -0.59
HDAC6-216ENST00000468949 ATF3P18847 181 aa11.35□□□□□ -0.59
HDAC6-216ENST00000468949 C19orf44Q9H6X5 657 aa11.35□□□□□ -0.59
HDAC6-216ENST00000468949 ROBO2Q9HCK4 1378 aa11.35□□□□□ -0.59
HDAC6-216ENST00000468949 DISP3Q9P2K9 1392 aa11.35□□□□□ -0.59
HDAC6-216ENST00000468949 NHSL1Q5SYE7 1610 aa11.35□□□□□ -0.59
HDAC6-216ENST00000468949 MST1RQ04912 1400 aa11.35□□□□□ -0.59
HDAC6-216ENST00000468949 ST20-MTHFSA0A0A6YYL1 179 aa11.34□□□□□ -0.59
HDAC6-216ENST00000468949 QRICH2Q9H0J4 1663 aa11.33□□□□□ -0.6
HDAC6-216ENST00000468949 SLAIN2Q9P270 581 aa11.33□□□□□ -0.6
HDAC6-216ENST00000468949 SHPRHQ149N8 1683 aa11.33□□□□□ -0.6
HDAC6-216ENST00000468949 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
HDAC6-216ENST00000468949 TMF1P82094 1093 aa11.32□□□□□ -0.6
HDAC6-216ENST00000468949 CDCA8Q53HL2 280 aa11.32□□□□□ -0.6
HDAC6-216ENST00000468949 POTEDQ86YR6 584 aa11.32□□□□□ -0.6
HDAC6-216ENST00000468949 SIRT1Q96EB6 747 aa11.32□□□□□ -0.6
HDAC6-216ENST00000468949 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-216ENST00000468949 MINK1Q8N4C8 1332 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-216ENST00000468949 WAPLQ7Z5K2 1190 aa11.31□□□□□ -0.6
HDAC6-216ENST00000468949 POLR3GLQ9BT43 218 aa11.31□□□□□ -0.6
HDAC6-216ENST00000468949 FMN2Q9NZ56 1722 aa11.31□□□□□ -0.6
HDAC6-216ENST00000468949 EVC2Q86UK5 1308 aa11.31□□□□□ -0.6
HDAC6-216ENST00000468949 PLEKHH1Q9ULM0 1364 aa11.3□□□□□ -0.6
HDAC6-216ENST00000468949 SBNO2Q9Y2G9 1366 aa11.3□□□□□ -0.6
HDAC6-216ENST00000468949 ADGRB2O60241 1585 aa11.3□□□□□ -0.6
HDAC6-216ENST00000468949 SRPK2P78362 688 aaKnown RBP11.29□□□□□ -0.6
HDAC6-216ENST00000468949 C1orf167Q5SNV9 1468 aa11.29□□□□□ -0.6
HDAC6-216ENST00000468949 KIF1AQ12756 1690 aa11.28□□□□□ -0.6
HDAC6-216ENST00000468949 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-216ENST00000468949 JCADQ9P266 1359 aa11.28□□□□□ -0.6
HDAC6-216ENST00000468949 BRINP3Q76B58 766 aa11.27□□□□□ -0.61
HDAC6-216ENST00000468949 TESK2Q96S53 571 aa11.26□□□□□ -0.61
HDAC6-216ENST00000468949 ATAD2Q6PL18 1390 aa11.25□□□□□ -0.61
HDAC6-216ENST00000468949 TULP4Q9NRJ4 1543 aa11.25□□□□□ -0.61
HDAC6-216ENST00000468949 WASLO00401 505 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-216ENST00000468949 CDK19Q9BWU1 502 aa11.24□□□□□ -0.61
HDAC6-216ENST00000468949 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-216ENST00000468949 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-216ENST00000468949 LRP6O75581 1613 aa11.23□□□□□ -0.61
HDAC6-216ENST00000468949 NUTM2FA1L443 756 aa11.22□□□□□ -0.61
HDAC6-216ENST00000468949 KIF7Q2M1P5 1343 aa11.22□□□□□ -0.61
HDAC6-216ENST00000468949 SPATA31A6Q5VVP1 1343 aa11.22□□□□□ -0.61
HDAC6-216ENST00000468949 COL22A1Q8NFW1 1626 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-216ENST00000468949 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
HDAC6-216ENST00000468949 CCDC7Q96M83 1385 aa11.22□□□□□ -0.61
HDAC6-216ENST00000468949 CABP2Q9NPB3 220 aa11.22□□□□□ -0.61
HDAC6-216ENST00000468949 USP32Q8NFA0 1604 aa11.21□□□□□ -0.61
HDAC6-216ENST00000468949 ANKARQ7Z5J8 1434 aa11.21□□□□□ -0.61
HDAC6-216ENST00000468949 NINLQ9Y2I6 1382 aa11.21□□□□□ -0.61
HDAC6-216ENST00000468949 ILDR2Q71H61 639 aa11.21□□□□□ -0.61
HDAC6-216ENST00000468949 ITSN1Q15811 1721 aa11.21□□□□□ -0.62
HDAC6-216ENST00000468949 PXDNQ92626 1479 aa11.2□□□□□ -0.62
HDAC6-216ENST00000468949 PUS7Q96PZ0 661 aaKnown RBP11.2□□□□□ -0.62
HDAC6-216ENST00000468949 PNPLA6Q8IY17 1366 aa11.19□□□□□ -0.62
HDAC6-216ENST00000468949 WASHC2AQ641Q2 1341 aa11.19□□□□□ -0.62
HDAC6-216ENST00000468949 NPHP3Q7Z494 1330 aa11.19□□□□□ -0.62
HDAC6-216ENST00000468949 NUDT16Q96DE0 195 aaKnown RBP11.19□□□□□ -0.62
HDAC6-216ENST00000468949 ATP7BP35670 1465 aa11.19□□□□□ -0.62
HDAC6-216ENST00000468949 PPIP5K1Q6PFW1 1433 aa11.18□□□□□ -0.62
HDAC6-216ENST00000468949 RGPD8O14715 1765 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-216ENST00000468949 HDGFL2Q7Z4V5 671 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-216ENST00000468949 TERF2IPQ9NYB0 399 aa11.18□□□□□ -0.62
HDAC6-216ENST00000468949 CCDC61Q9Y6R9 512 aa11.18□□□□□ -0.62
HDAC6-216ENST00000468949 TOPAZ1Q8N9V7 1692 aa11.17□□□□□ -0.62
HDAC6-216ENST00000468949 SOS2Q07890 1332 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 287.4 ms