RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 SIRT1Q96EB6 747 aa16.62■□□□□ 0.25
RNF13-208ENST00000467996 XIRP1Q702N8 1843 aaKnown RBP16.61■□□□□ 0.25
RNF13-208ENST00000467996 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
RNF13-208ENST00000467996 SAFB2Q14151 953 aaKnown RBP eCLIP16.6■□□□□ 0.25
RNF13-208ENST00000467996 WAPLQ7Z5K2 1190 aa16.6■□□□□ 0.25
RNF13-208ENST00000467996 POGKQ9P215 609 aa16.6■□□□□ 0.25
RNF13-208ENST00000467996 DISP3Q9P2K9 1392 aa16.6■□□□□ 0.25
RNF13-208ENST00000467996 MYOM1P52179 1685 aa16.58■□□□□ 0.24
RNF13-208ENST00000467996 MINK1Q8N4C8 1332 aaPredicted RBP16.57■□□□□ 0.24
RNF13-208ENST00000467996 CDC42BPGQ6DT37 1551 aa16.56■□□□□ 0.24
RNF13-208ENST00000467996 ZNF335Q9H4Z2 1342 aaPredicted RBP16.56■□□□□ 0.24
RNF13-208ENST00000467996 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
RNF13-208ENST00000467996 TMF1P82094 1093 aa16.56■□□□□ 0.24
RNF13-208ENST00000467996 FMN2Q9NZ56 1722 aa16.56■□□□□ 0.24
RNF13-208ENST00000467996 CCDC7Q96M83 1385 aa16.55■□□□□ 0.24
RNF13-208ENST00000467996 KIF7Q2M1P5 1343 aa16.55■□□□□ 0.24
RNF13-208ENST00000467996 WASHC2AQ641Q2 1341 aa16.54■□□□□ 0.24
RNF13-208ENST00000467996 SLC24A1O60721 1099 aa16.54■□□□□ 0.24
RNF13-208ENST00000467996 ADGRL3Q9HAR2 1447 aa16.53■□□□□ 0.24
RNF13-208ENST00000467996 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
RNF13-208ENST00000467996 TOPAZ1Q8N9V7 1692 aa16.53■□□□□ 0.24
RNF13-208ENST00000467996 EVC2Q86UK5 1308 aa16.52■□□□□ 0.24
RNF13-208ENST00000467996 ITSN1Q15811 1721 aa16.52■□□□□ 0.24
RNF13-208ENST00000467996 LTBP4Q8N2S1 1624 aa16.52■□□□□ 0.23
RNF13-208ENST00000467996 USP32Q8NFA0 1604 aa16.52■□□□□ 0.23
RNF13-208ENST00000467996 RGPD8O14715 1765 aaPredicted RBP16.51■□□□□ 0.23
RNF13-208ENST00000467996 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
RNF13-208ENST00000467996 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
RNF13-208ENST00000467996 RBM33Q96EV2 1170 aaKnown RBP16.5■□□□□ 0.23
RNF13-208ENST00000467996 NCOA3Q9Y6Q9 1424 aa16.5■□□□□ 0.23
RNF13-208ENST00000467996 CDCA8Q53HL2 280 aa16.49■□□□□ 0.23
RNF13-208ENST00000467996 ATP7BP35670 1465 aa16.48■□□□□ 0.23
RNF13-208ENST00000467996 WASLO00401 505 aaPredicted RBP16.48■□□□□ 0.23
RNF13-208ENST00000467996 POLR3GLQ9BT43 218 aa16.48■□□□□ 0.23
RNF13-208ENST00000467996 CDK19Q9BWU1 502 aa16.47■□□□□ 0.23
RNF13-208ENST00000467996 SRPK2P78362 688 aaKnown RBP16.46■□□□□ 0.23
RNF13-208ENST00000467996 PUS7Q96PZ0 661 aaKnown RBP16.46■□□□□ 0.23
RNF13-208ENST00000467996 CABP2Q9NPB3 220 aa16.46■□□□□ 0.23
RNF13-208ENST00000467996 DCCP43146 1447 aa16.45■□□□□ 0.22
RNF13-208ENST00000467996 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
RNF13-208ENST00000467996 ATAD2Q6PL18 1390 aa16.45■□□□□ 0.22
RNF13-208ENST00000467996 AKAP12Q02952 1782 aa16.44■□□□□ 0.22
RNF13-208ENST00000467996 ANKARQ7Z5J8 1434 aa16.44■□□□□ 0.22
RNF13-208ENST00000467996 PRR36Q9H6K5 1346 aa16.43■□□□□ 0.22
RNF13-208ENST00000467996 MSH6P52701 1360 aa16.42■□□□□ 0.22
RNF13-208ENST00000467996 NINLQ9Y2I6 1382 aa16.41■□□□□ 0.22
RNF13-208ENST00000467996 C19orf44Q9H6X5 657 aa16.41■□□□□ 0.22
RNF13-208ENST00000467996 PPIP5K1Q6PFW1 1433 aa16.41■□□□□ 0.22
RNF13-208ENST00000467996 MON2Q7Z3U7 1717 aa16.41■□□□□ 0.22
RNF13-208ENST00000467996 DDX10Q13206 875 aaKnown RBP16.4■□□□□ 0.22
RNF13-208ENST00000467996 NUDT16Q96DE0 195 aaKnown RBP16.4■□□□□ 0.22
RNF13-208ENST00000467996 KIF1AQ12756 1690 aa16.4■□□□□ 0.22
RNF13-208ENST00000467996 MST1RQ04912 1400 aa16.39■□□□□ 0.21
RNF13-208ENST00000467996 NUTM2FA1L443 756 aa16.39■□□□□ 0.21
RNF13-208ENST00000467996 CD163L1Q9NR16 1453 aa16.39■□□□□ 0.21
RNF13-208ENST00000467996 NRKQ7Z2Y5 1582 aa16.38■□□□□ 0.21
RNF13-208ENST00000467996 C1orf167Q5SNV9 1468 aa16.37■□□□□ 0.21
RNF13-208ENST00000467996 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
RNF13-208ENST00000467996 SLC12A5Q9H2X9 1139 aa16.37■□□□□ 0.21
RNF13-208ENST00000467996 ATF3P18847 181 aa16.36■□□□□ 0.21
RNF13-208ENST00000467996 CCDC61Q9Y6R9 512 aa16.36■□□□□ 0.21
RNF13-208ENST00000467996 ANKRD36BQ8N2N9 1353 aa16.36■□□□□ 0.21
RNF13-208ENST00000467996 CADPS2Q86UW7 1296 aa16.35■□□□□ 0.21
RNF13-208ENST00000467996 KIF20BQ96Q89 1820 aa16.35■□□□□ 0.21
RNF13-208ENST00000467996 A0A1W2PP64 1363 aa16.35■□□□□ 0.21
RNF13-208ENST00000467996 CABP1Q9NZU7 370 aa16.34■□□□□ 0.21
RNF13-208ENST00000467996 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
RNF13-208ENST00000467996 PANK3Q9H999 370 aa16.33■□□□□ 0.2
RNF13-208ENST00000467996 CPSF1Q10570 1443 aaKnown RBP16.33■□□□□ 0.2
RNF13-208ENST00000467996 ANKRD26Q9UPS8 1709 aa16.32■□□□□ 0.2
RNF13-208ENST00000467996 NSD3Q9BZ95 1437 aa16.31■□□□□ 0.2
RNF13-208ENST00000467996 POLR3AO14802 1390 aaPredicted RBP16.31■□□□□ 0.2
RNF13-208ENST00000467996 PLEKHG3A1L390 1219 aa16.31■□□□□ 0.2
RNF13-208ENST00000467996 DIEXFQ68CQ4 756 aaKnown RBP16.31■□□□□ 0.2
RNF13-208ENST00000467996 TERF2IPQ9NYB0 399 aa16.3■□□□□ 0.2
RNF13-208ENST00000467996 ACEP12821 1306 aa16.29■□□□□ 0.2
RNF13-208ENST00000467996 TRPM3Q9HCF6 1732 aaPredicted RBP16.29■□□□□ 0.2
RNF13-208ENST00000467996 ESCO1Q5FWF5 840 aa16.29■□□□□ 0.2
RNF13-208ENST00000467996 HDGFL2Q7Z4V5 671 aaPredicted RBP16.29■□□□□ 0.2
RNF13-208ENST00000467996 PMFBP1Q8TBY8 1022 aa16.29■□□□□ 0.2
RNF13-208ENST00000467996 CARD14Q9BXL6 1004 aa16.29■□□□□ 0.2
RNF13-208ENST00000467996 PHF8Q9UPP1 1060 aa16.29■□□□□ 0.2
RNF13-208ENST00000467996 ROBO1Q9Y6N7 1651 aa16.29■□□□□ 0.2
RNF13-208ENST00000467996 NHSL1Q5SYE7 1610 aa16.29■□□□□ 0.2
RNF13-208ENST00000467996 USP6P35125 1406 aa16.28■□□□□ 0.2
RNF13-208ENST00000467996 KTN1Q86UP2 1357 aaKnown RBP16.28■□□□□ 0.2
RNF13-208ENST00000467996 ORAI2Q96SN7 254 aa16.28■□□□□ 0.2
RNF13-208ENST00000467996 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
RNF13-208ENST00000467996 PER1O15534 1290 aaPredicted RBP16.27■□□□□ 0.2
RNF13-208ENST00000467996 FBXO41Q8TF61 875 aa16.26■□□□□ 0.19
RNF13-208ENST00000467996 SLAIN2Q9P270 581 aa16.26■□□□□ 0.19
RNF13-208ENST00000467996 PIK3C2AO00443 1686 aa16.25■□□□□ 0.19
RNF13-208ENST00000467996 ILDR1Q86SU0 546 aaPredicted RBP16.25■□□□□ 0.19
RNF13-208ENST00000467996 NGDNQ8NEJ9 315 aaKnown RBP16.25■□□□□ 0.19
RNF13-208ENST00000467996 USP54Q70EL1 1684 aa16.24■□□□□ 0.19
RNF13-208ENST00000467996 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
RNF13-208ENST00000467996 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
RNF13-208ENST00000467996 SSH2Q76I76 1423 aa16.24■□□□□ 0.19
RNF13-208ENST00000467996 MARF1Q9Y4F3 1742 aaKnown RBP16.24■□□□□ 0.19
RNF13-208ENST00000467996 BRINP3Q76B58 766 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms