RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-209ENST00000467081 SLC6A16Q9GZN6 736 aa12.8□□□□□ -0.36
CCNL1-209ENST00000467081 GGCXP38435 758 aa12.79□□□□□ -0.36
CCNL1-209ENST00000467081 FAM160A2Q8N612 972 aaPredicted RBP12.79□□□□□ -0.36
CCNL1-209ENST00000467081 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
CCNL1-209ENST00000467081 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
CCNL1-209ENST00000467081 C6orf229H3BNL8 230 aa12.78□□□□□ -0.36
CCNL1-209ENST00000467081 SPTLC1O15269 473 aa12.78□□□□□ -0.36
CCNL1-209ENST00000467081 IL27Q8NEV9 243 aa12.78□□□□□ -0.36
CCNL1-209ENST00000467081 CSPP1Q1MSJ5 1256 aa12.77□□□□□ -0.37
CCNL1-209ENST00000467081 USB1Q9BQ65 265 aaKnown RBP12.77□□□□□ -0.37
CCNL1-209ENST00000467081 POLR3EQ9NVU0 708 aa12.77□□□□□ -0.37
CCNL1-209ENST00000467081 PCDHB15Q9Y5E8 787 aa12.77□□□□□ -0.37
CCNL1-209ENST00000467081 GJA5P36382 358 aa12.76□□□□□ -0.37
CCNL1-209ENST00000467081 PRDM9Q9NQV7 894 aa12.76□□□□□ -0.37
CCNL1-209ENST00000467081 LIMD1Q9UGP4 676 aa12.76□□□□□ -0.37
CCNL1-209ENST00000467081 PPEF1O14829 653 aaPredicted RBP12.75□□□□□ -0.37
CCNL1-209ENST00000467081 RNF223E7ERA6 249 aa12.74□□□□□ -0.37
CCNL1-209ENST00000467081 CLK2P49760 499 aaKnown RBP12.74□□□□□ -0.37
CCNL1-209ENST00000467081 MSS51Q4VC12 460 aa12.74□□□□□ -0.37
CCNL1-209ENST00000467081 MTMR2Q13614 643 aa12.72□□□□□ -0.37
CCNL1-209ENST00000467081 SH3D19Q5HYK7 790 aa12.72□□□□□ -0.37
CCNL1-209ENST00000467081 RETREG3Q86VR2 466 aa12.72□□□□□ -0.37
CCNL1-209ENST00000467081 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
CCNL1-209ENST00000467081 CABLES1Q8TDN4 633 aa12.71□□□□□ -0.37
CCNL1-209ENST00000467081 SKIV2LQ15477 1246 aaKnown RBP12.7□□□□□ -0.38
CCNL1-209ENST00000467081 ZBTB3Q9H5J0 574 aa12.7□□□□□ -0.38
CCNL1-209ENST00000467081 HRCP23327 699 aa12.69□□□□□ -0.38
CCNL1-209ENST00000467081 QPCTQ16769 361 aa12.68□□□□□ -0.38
CCNL1-209ENST00000467081 PRPF38BQ5VTL8 546 aaKnown RBP12.68□□□□□ -0.38
CCNL1-209ENST00000467081 ANKLE1Q8NAG6 615 aa12.68□□□□□ -0.38
CCNL1-209ENST00000467081 PROCA1Q8NCQ7 364 aaPredicted RBP12.68□□□□□ -0.38
CCNL1-209ENST00000467081 SPDYE5A6NIY4 337 aa12.67□□□□□ -0.38
CCNL1-209ENST00000467081 NUTM2BA6NNL0 878 aaPredicted RBP12.67□□□□□ -0.38
CCNL1-209ENST00000467081 NUTM2EB1AL46 878 aaPredicted RBP12.67□□□□□ -0.38
CCNL1-209ENST00000467081 TUSC1Q2TAM9 212 aa12.67□□□□□ -0.38
CCNL1-209ENST00000467081 NUTM2DQ5VT03 806 aaPredicted RBP12.67□□□□□ -0.38
CCNL1-209ENST00000467081 NUTM2AQ8IVF1 878 aaPredicted RBP12.67□□□□□ -0.38
CCNL1-209ENST00000467081 PRR7Q8TB68 274 aa12.67□□□□□ -0.38
CCNL1-209ENST00000467081 MMP16P51512 607 aa12.66□□□□□ -0.38
CCNL1-209ENST00000467081 FCF1Q9Y324 198 aaKnown RBP12.66□□□□□ -0.38
CCNL1-209ENST00000467081 LILRB3O75022 631 aa12.65□□□□□ -0.38
CCNL1-209ENST00000467081 DXOO77932 396 aaKnown RBP12.65□□□□□ -0.38
CCNL1-209ENST00000467081 JUNDP17535 347 aa12.65□□□□□ -0.38
CCNL1-209ENST00000467081 RGS20O76081 388 aa12.64□□□□□ -0.39
CCNL1-209ENST00000467081 CFAP99D6REC4 459 aa12.63□□□□□ -0.39
CCNL1-209ENST00000467081 PRKD2Q9BZL6 878 aa12.63□□□□□ -0.39
CCNL1-209ENST00000467081 RTL5Q5HYW3 569 aaPredicted RBP12.62□□□□□ -0.39
CCNL1-209ENST00000467081 PLA2G2CQ5R387 149 aa12.62□□□□□ -0.39
CCNL1-209ENST00000467081 TSC1Q92574 1164 aa12.61□□□□□ -0.39
CCNL1-209ENST00000467081 PCMTD1Q96MG8 357 aaPredicted RBP12.61□□□□□ -0.39
CCNL1-209ENST00000467081 GOPCQ9HD26 462 aa12.61□□□□□ -0.39
CCNL1-209ENST00000467081 CCDC24Q8N4L8 307 aa12.6□□□□□ -0.39
CCNL1-209ENST00000467081 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCNL1-209ENST00000467081 EMID1Q96A84 441 aaPredicted RBP12.59□□□□□ -0.39
CCNL1-209ENST00000467081 SLC19A1P41440 591 aa12.58□□□□□ -0.4
CCNL1-209ENST00000467081 FBXO31Q5XUX0 539 aaPredicted RBP12.58□□□□□ -0.4
CCNL1-209ENST00000467081 DESI1Q6ICB0 168 aa12.57□□□□□ -0.4
CCNL1-209ENST00000467081 LIAT1Q6ZQX7 453 aa12.57□□□□□ -0.4
CCNL1-209ENST00000467081 NUDT12Q9BQG2 462 aa12.57□□□□□ -0.4
CCNL1-209ENST00000467081 V9GY48 417 aaPredicted RBP12.57□□□□□ -0.4
CCNL1-209ENST00000467081 PTPRNQ16849 979 aa12.54□□□□□ -0.4
CCNL1-209ENST00000467081 ZBTB24O43167 697 aaPredicted RBP12.53□□□□□ -0.4
CCNL1-209ENST00000467081 CCNYL3P0C7X3 344 aa12.53□□□□□ -0.4
CCNL1-209ENST00000467081 PPP2R2DQ66LE6 453 aa12.53□□□□□ -0.4
CCNL1-209ENST00000467081 HELBQ8NG08 1087 aaPredicted RBP12.53□□□□□ -0.4
CCNL1-209ENST00000467081 LYPD8Q6UX82 237 aa12.52□□□□□ -0.41
CCNL1-209ENST00000467081 PER1O15534 1290 aaPredicted RBP12.51□□□□□ -0.41
CCNL1-209ENST00000467081 SPRYD7Q5W111 196 aa12.51□□□□□ -0.41
CCNL1-209ENST00000467081 RPIAP49247 311 aa12.5□□□□□ -0.41
CCNL1-209ENST00000467081 PTCRAQ6ISU1 281 aaPredicted RBP12.5□□□□□ -0.41
CCNL1-209ENST00000467081 RFC5P40937 340 aa12.49□□□□□ -0.41
CCNL1-209ENST00000467081 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
CCNL1-209ENST00000467081 EVA1BQ9NVM1 165 aa12.49□□□□□ -0.41
CCNL1-209ENST00000467081 CTHP32929 405 aa12.48□□□□□ -0.41
CCNL1-209ENST00000467081 AP1G2O75843 785 aa12.47□□□□□ -0.41
CCNL1-209ENST00000467081 CD2BP2O95400 341 aaKnown RBP12.47□□□□□ -0.41
CCNL1-209ENST00000467081 KCNH2Q12809 1159 aa12.47□□□□□ -0.41
CCNL1-209ENST00000467081 ZNF598Q86UK7 904 aaKnown RBP12.47□□□□□ -0.41
CCNL1-209ENST00000467081 ZNF697Q5TEC3 545 aa12.46□□□□□ -0.41
CCNL1-209ENST00000467081 TRIM32Q13049 653 aa12.45□□□□□ -0.42
CCNL1-209ENST00000467081 MAP10Q9P2G4 905 aa12.45□□□□□ -0.42
CCNL1-209ENST00000467081 F12P00748 615 aaPredicted RBP12.44□□□□□ -0.42
CCNL1-209ENST00000467081 UNC93B1Q9H1C4 597 aa12.44□□□□□ -0.42
CCNL1-209ENST00000467081 LRRN4Q8WUT4 740 aa12.43□□□□□ -0.42
CCNL1-209ENST00000467081 FOXC1Q12948 553 aa12.4□□□□□ -0.42
CCNL1-209ENST00000467081 TMEM259Q4ZIN3 620 aa12.4□□□□□ -0.42
CCNL1-209ENST00000467081 USP17L8P0C7I0 530 aa12.39□□□□□ -0.43
CCNL1-209ENST00000467081 IRX2Q9BZI1 471 aaPredicted RBP12.39□□□□□ -0.43
CCNL1-209ENST00000467081 LINC01559Q495D7 138 aa12.38□□□□□ -0.43
CCNL1-209ENST00000467081 BAP1Q92560 729 aa12.38□□□□□ -0.43
CCNL1-209ENST00000467081 TNFRSF10AO00220 468 aa12.37□□□□□ -0.43
CCNL1-209ENST00000467081 SKOR1P84550 965 aa12.37□□□□□ -0.43
CCNL1-209ENST00000467081 TRIM67Q6ZTA4 783 aa12.37□□□□□ -0.43
CCNL1-209ENST00000467081 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
CCNL1-209ENST00000467081 GFRA3O60609 400 aa12.36□□□□□ -0.43
CCNL1-209ENST00000467081 GDF9O60383 454 aa12.35□□□□□ -0.43
CCNL1-209ENST00000467081 NR6A1Q15406 480 aa12.35□□□□□ -0.43
CCNL1-209ENST00000467081 TMEM132AQ24JP5 1023 aa12.35□□□□□ -0.43
CCNL1-209ENST00000467081 HMX1Q9NP08 348 aaPredicted RBP12.35□□□□□ -0.43
CCNL1-209ENST00000467081 PKD2L1Q9P0L9 805 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms