RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 MST1RQ04912 1400 aa33.4■■■□□ 2.94
SUMO3-205ENST00000466861 PLEKHH1Q9ULM0 1364 aa33.4■■■□□ 2.94
SUMO3-205ENST00000466861 TRAK1Q9UPV9 953 aa33.4■■■□□ 2.94
SUMO3-205ENST00000466861 PRAM1Q96QH2 718 aa33.39■■■□□ 2.94
SUMO3-205ENST00000466861 ARHGEF28Q8N1W1 1705 aaKnown RBP33.37■■■□□ 2.93
SUMO3-205ENST00000466861 NBPF1Q3BBV0 1214 aa33.37■■■□□ 2.93
SUMO3-205ENST00000466861 POGKQ9P215 609 aa33.37■■■□□ 2.93
SUMO3-205ENST00000466861 CCER1Q8TC90 406 aaPredicted RBP33.36■■■□□ 2.93
SUMO3-205ENST00000466861 HSPA1LP34931 641 aa33.33■■■□□ 2.93
SUMO3-205ENST00000466861 ADGRB2O60241 1585 aa33.32■■■□□ 2.92
SUMO3-205ENST00000466861 C1orf167Q5SNV9 1468 aa33.31■■■□□ 2.92
SUMO3-205ENST00000466861 NBPF8Q3BBV2 869 aa33.31■■■□□ 2.92
SUMO3-205ENST00000466861 GPRASP1Q5JY77 1395 aa33.31■■■□□ 2.92
SUMO3-205ENST00000466861 ROCK2O75116 1388 aaKnown RBP33.3■■■□□ 2.92
SUMO3-205ENST00000466861 FMN2Q9NZ56 1722 aa33.28■■■□□ 2.92
SUMO3-205ENST00000466861 BRINP3Q76B58 766 aa33.28■■■□□ 2.92
SUMO3-205ENST00000466861 RALGAPBQ86X10 1494 aa33.28■■■□□ 2.92
SUMO3-205ENST00000466861 AHDC1Q5TGY3 1603 aaPredicted RBP33.26■■■□□ 2.91
SUMO3-205ENST00000466861 SAFB2Q14151 953 aaKnown RBP eCLIP33.24■■■□□ 2.91
SUMO3-205ENST00000466861 EIF3AQ14152 1382 aaKnown RBP33.22■■■□□ 2.91
SUMO3-205ENST00000466861 PHLPP1O60346 1717 aa33.21■■■□□ 2.91
SUMO3-205ENST00000466861 ANKARQ7Z5J8 1434 aa33.19■■■□□ 2.9
SUMO3-205ENST00000466861 NHSL1Q5SYE7 1610 aa33.19■■■□□ 2.9
SUMO3-205ENST00000466861 MINK1Q8N4C8 1332 aaPredicted RBP33.18■■■□□ 2.9
SUMO3-205ENST00000466861 CENPJQ9HC77 1338 aaPredicted RBP33.18■■■□□ 2.9
SUMO3-205ENST00000466861 WASLO00401 505 aaPredicted RBP33.15■■■□□ 2.9
SUMO3-205ENST00000466861 COL16A1Q07092 1604 aaPredicted RBP33.15■■■□□ 2.9
SUMO3-205ENST00000466861 ORAI2Q96SN7 254 aa33.14■■■□□ 2.9
SUMO3-205ENST00000466861 CARD11Q9BXL7 1154 aa33.14■■■□□ 2.9
SUMO3-205ENST00000466861 KIF1AQ12756 1690 aa33.13■■■□□ 2.89
SUMO3-205ENST00000466861 ESCO1Q5FWF5 840 aa33.12■■■□□ 2.89
SUMO3-205ENST00000466861 TULP4Q9NRJ4 1543 aa33.12■■■□□ 2.89
SUMO3-205ENST00000466861 QRICH2Q9H0J4 1663 aa33.11■■■□□ 2.89
SUMO3-205ENST00000466861 HIRIP3Q9BW71 556 aaPredicted RBP33.11■■■□□ 2.89
SUMO3-205ENST00000466861 RGPD8O14715 1765 aaPredicted RBP33.09■■■□□ 2.89
SUMO3-205ENST00000466861 NPHP3Q7Z494 1330 aa33.07■■■□□ 2.88
SUMO3-205ENST00000466861 USP32Q8NFA0 1604 aa33.07■■■□□ 2.88
SUMO3-205ENST00000466861 NUTM2FA1L443 756 aa33.07■■■□□ 2.88
SUMO3-205ENST00000466861 JCADQ9P266 1359 aa33.07■■■□□ 2.88
SUMO3-205ENST00000466861 SBNO2Q9Y2G9 1366 aa33.06■■■□□ 2.88
SUMO3-205ENST00000466861 SOS2Q07890 1332 aaPredicted RBP33.04■■■□□ 2.88
SUMO3-205ENST00000466861 LRRC59Q96AG4 307 aaKnown RBP33.03■■■□□ 2.88
SUMO3-205ENST00000466861 ITSN1Q15811 1721 aa33.02■■■□□ 2.88
SUMO3-205ENST00000466861 CDK19Q9BWU1 502 aa33.02■■■□□ 2.88
SUMO3-205ENST00000466861 PHF8Q9UPP1 1060 aa33.02■■■□□ 2.88
SUMO3-205ENST00000466861 SHPRHQ149N8 1683 aa33.01■■■□□ 2.87
SUMO3-205ENST00000466861 PRR36Q9H6K5 1346 aa33■■■□□ 2.87
SUMO3-205ENST00000466861 ATP7BP35670 1465 aa32.99■■■□□ 2.87
SUMO3-205ENST00000466861 FOXO3O43524 673 aa32.98■■■□□ 2.87
SUMO3-205ENST00000466861 SLC24A1O60721 1099 aa32.98■■■□□ 2.87
SUMO3-205ENST00000466861 EVC2Q86UK5 1308 aa32.98■■■□□ 2.87
SUMO3-205ENST00000466861 NUDT16Q96DE0 195 aaKnown RBP32.97■■■□□ 2.87
SUMO3-205ENST00000466861 DDX17Q92841 729 aaKnown RBP32.96■■■□□ 2.87
SUMO3-205ENST00000466861 PXDNQ92626 1479 aa32.96■■■□□ 2.87
SUMO3-205ENST00000466861 CCDC61Q9Y6R9 512 aa32.95■■■□□ 2.87
SUMO3-205ENST00000466861 SPATA31A6Q5VVP1 1343 aa32.95■■■□□ 2.86
SUMO3-205ENST00000466861 TOPAZ1Q8N9V7 1692 aa32.93■■■□□ 2.86
SUMO3-205ENST00000466861 SRPK2P78362 688 aaKnown RBP32.91■■■□□ 2.86
SUMO3-205ENST00000466861 PSME1Q06323 249 aa32.9■■■□□ 2.86
SUMO3-205ENST00000466861 MED1Q15648 1581 aaPredicted RBP32.9■■■□□ 2.86
SUMO3-205ENST00000466861 PNPLA6Q8IY17 1366 aa32.88■■■□□ 2.85
SUMO3-205ENST00000466861 PLEKHG3A1L390 1219 aa32.88■■■□□ 2.85
SUMO3-205ENST00000466861 KRT28Q7Z3Y7 464 aa32.88■■■□□ 2.85
SUMO3-205ENST00000466861 USP47Q96K76 1375 aa32.87■■■□□ 2.85
SUMO3-205ENST00000466861 PMFBP1Q8TBY8 1022 aa32.87■■■□□ 2.85
SUMO3-205ENST00000466861 SBNO1A3KN83 1393 aa32.86■■■□□ 2.85
SUMO3-205ENST00000466861 PUS7Q96PZ0 661 aaKnown RBP32.86■■■□□ 2.85
SUMO3-205ENST00000466861 POLR3AO14802 1390 aaPredicted RBP32.84■■■□□ 2.85
SUMO3-205ENST00000466861 ST20-MTHFSA0A0A6YYL1 179 aa32.84■■■□□ 2.85
SUMO3-205ENST00000466861 NGDNQ8NEJ9 315 aaKnown RBP32.84■■■□□ 2.85
SUMO3-205ENST00000466861 CABP2Q9NPB3 220 aa32.84■■■□□ 2.85
SUMO3-205ENST00000466861 ATAD2Q6PL18 1390 aa32.83■■■□□ 2.85
SUMO3-205ENST00000466861 SPATA31A3Q5VYP0 1347 aa32.83■■■□□ 2.85
SUMO3-205ENST00000466861 COL22A1Q8NFW1 1626 aaPredicted RBP32.83■■■□□ 2.85
SUMO3-205ENST00000466861 TESK2Q96S53 571 aa32.82■■■□□ 2.84
SUMO3-205ENST00000466861 PPIP5K1Q6PFW1 1433 aa32.8■■■□□ 2.84
SUMO3-205ENST00000466861 XPCQ01831 940 aaPredicted RBP32.8■■■□□ 2.84
SUMO3-205ENST00000466861 TNS3Q68CZ2 1445 aa32.79■■■□□ 2.84
SUMO3-205ENST00000466861 TRPM3Q9HCF6 1732 aaPredicted RBP32.78■■■□□ 2.84
SUMO3-205ENST00000466861 BRD4O60885 1362 aaPredicted RBP32.78■■■□□ 2.84
SUMO3-205ENST00000466861 ACEP12821 1306 aa32.77■■■□□ 2.84
SUMO3-205ENST00000466861 ARHGEF10O15013 1369 aa32.76■■■□□ 2.83
SUMO3-205ENST00000466861 DISP3Q9P2K9 1392 aa32.73■■■□□ 2.83
SUMO3-205ENST00000466861 CABP1Q9NZU7 370 aa32.73■■■□□ 2.83
SUMO3-205ENST00000466861 LRP6O75581 1613 aa32.72■■■□□ 2.83
SUMO3-205ENST00000466861 ALS2Q96Q42 1657 aa32.72■■■□□ 2.83
SUMO3-205ENST00000466861 TMF1P82094 1093 aa32.7■■■□□ 2.83
SUMO3-205ENST00000466861 EIF4G2P78344 907 aaKnown RBP eCLIP32.69■■■□□ 2.82
SUMO3-205ENST00000466861 ZNF692Q9BU19 519 aaPredicted RBP32.69■■■□□ 2.82
SUMO3-205ENST00000466861 CDCA8Q53HL2 280 aa32.68■■■□□ 2.82
SUMO3-205ENST00000466861 NINLQ9Y2I6 1382 aa32.68■■■□□ 2.82
SUMO3-205ENST00000466861 PHF23Q9BUL5 403 aaPredicted RBP32.67■■■□□ 2.82
SUMO3-205ENST00000466861 NUTM2BA6NNL0 878 aaPredicted RBP32.66■■■□□ 2.82
SUMO3-205ENST00000466861 NUTM2EB1AL46 878 aaPredicted RBP32.66■■■□□ 2.82
SUMO3-205ENST00000466861 NUTM2AQ8IVF1 878 aaPredicted RBP32.66■■■□□ 2.82
SUMO3-205ENST00000466861 AKAP12Q02952 1782 aa32.65■■■□□ 2.82
SUMO3-205ENST00000466861 USP6P35125 1406 aa32.64■■■□□ 2.82
SUMO3-205ENST00000466861 MEX3CQ5U5Q3 659 aaKnown RBP32.64■■■□□ 2.82
SUMO3-205ENST00000466861 CPSF1Q10570 1443 aaKnown RBP32.63■■■□□ 2.81
SUMO3-205ENST00000466861 PAK3O75914 559 aaPredicted RBP32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms