RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 PMFBP1Q8TBY8 1022 aa16.64■□□□□ 0.25
PDZRN3-205ENST00000466780 MYO3AQ8NEV4 1616 aa16.64■□□□□ 0.25
PDZRN3-205ENST00000466780 TCP11L2Q8N4U5 519 aa16.63■□□□□ 0.25
PDZRN3-205ENST00000466780 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
PDZRN3-205ENST00000466780 SBNO2Q9Y2G9 1366 aa16.63■□□□□ 0.25
PDZRN3-205ENST00000466780 TBC1D32Q96NH3 1257 aa16.63■□□□□ 0.25
PDZRN3-205ENST00000466780 PDZRN3Q9UPQ7 1066 aa16.63■□□□□ 0.25
PDZRN3-205ENST00000466780 NSD3Q9BZ95 1437 aa16.63■□□□□ 0.25
PDZRN3-205ENST00000466780 FAM43AQ8N2R8 423 aa16.62■□□□□ 0.25
PDZRN3-205ENST00000466780 IFT172Q9UG01 1749 aa16.62■□□□□ 0.25
PDZRN3-205ENST00000466780 TNNT2P45379 298 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-205ENST00000466780 BCL2L13Q9BXK5 485 aa16.62■□□□□ 0.25
PDZRN3-205ENST00000466780 MORC1Q86VD1 984 aa16.61■□□□□ 0.25
PDZRN3-205ENST00000466780 ZMYM3Q14202 1370 aa16.61■□□□□ 0.25
PDZRN3-205ENST00000466780 AAMPQ13685 434 aa16.61■□□□□ 0.25
PDZRN3-205ENST00000466780 MROH1Q8NDA8 1641 aa16.61■□□□□ 0.25
PDZRN3-205ENST00000466780 NRXN1Q9ULB1 1477 aa16.61■□□□□ 0.25
PDZRN3-205ENST00000466780 ATP7AQ04656 1500 aa16.61■□□□□ 0.25
PDZRN3-205ENST00000466780 TBC1D2Q9BYX2 928 aa16.61■□□□□ 0.25
PDZRN3-205ENST00000466780 INO80Q9ULG1 1556 aaPredicted RBP16.61■□□□□ 0.25
PDZRN3-205ENST00000466780 MROH2AA6NES4 1674 aa16.6■□□□□ 0.25
PDZRN3-205ENST00000466780 ADGRL1O94910 1474 aa16.6■□□□□ 0.25
PDZRN3-205ENST00000466780 ARAP3Q8WWN8 1544 aa16.6■□□□□ 0.25
PDZRN3-205ENST00000466780 WDR63Q8IWG1 891 aa16.6■□□□□ 0.25
PDZRN3-205ENST00000466780 KIF1BO60333 1816 aa16.6■□□□□ 0.25
PDZRN3-205ENST00000466780 SLC12A5Q9H2X9 1139 aa16.59■□□□□ 0.25
PDZRN3-205ENST00000466780 UPF2Q9HAU5 1272 aaKnown RBP16.58■□□□□ 0.24
PDZRN3-205ENST00000466780 ZNF518AQ6AHZ1 1483 aa16.57■□□□□ 0.24
PDZRN3-205ENST00000466780 MTHFSP49914 203 aa16.56■□□□□ 0.24
PDZRN3-205ENST00000466780 CCDC27Q2M243 656 aa16.56■□□□□ 0.24
PDZRN3-205ENST00000466780 RWDD1Q9H446 243 aaPredicted RBP16.56■□□□□ 0.24
PDZRN3-205ENST00000466780 CHGAP10645 457 aaKnown RBP16.55■□□□□ 0.24
PDZRN3-205ENST00000466780 NOS1P29475 1434 aa16.55■□□□□ 0.24
PDZRN3-205ENST00000466780 ASXL2Q76L83 1435 aa16.55■□□□□ 0.24
PDZRN3-205ENST00000466780 EFCAB6Q5THR3 1501 aa16.55■□□□□ 0.24
PDZRN3-205ENST00000466780 ZC3H13Q5T200 1668 aaKnown RBP16.55■□□□□ 0.24
PDZRN3-205ENST00000466780 TRAK1Q9UPV9 953 aa16.55■□□□□ 0.24
PDZRN3-205ENST00000466780 SETBP1Q9Y6X0 1596 aa16.54■□□□□ 0.24
PDZRN3-205ENST00000466780 ABCA9Q8IUA7 1624 aa16.54■□□□□ 0.24
PDZRN3-205ENST00000466780 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
PDZRN3-205ENST00000466780 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
PDZRN3-205ENST00000466780 PPRC1Q5VV67 1664 aaKnown RBP16.53■□□□□ 0.24
PDZRN3-205ENST00000466780 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
PDZRN3-205ENST00000466780 USP32Q8NFA0 1604 aa16.53■□□□□ 0.24
PDZRN3-205ENST00000466780 L1TD1Q5T7N2 865 aaKnown RBP16.52■□□□□ 0.24
PDZRN3-205ENST00000466780 MYH16Q9H6N6 1097 aa16.52■□□□□ 0.23
PDZRN3-205ENST00000466780 ADGRB3O60242 1522 aa16.52■□□□□ 0.23
PDZRN3-205ENST00000466780 EIF5BO60841 1220 aaKnown RBP16.51■□□□□ 0.23
PDZRN3-205ENST00000466780 SPRYD3Q8NCJ5 442 aa16.51■□□□□ 0.23
PDZRN3-205ENST00000466780 RRAGDQ9NQL2 400 aaPredicted RBP16.51■□□□□ 0.23
PDZRN3-205ENST00000466780 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
PDZRN3-205ENST00000466780 ZKSCAN2Q63HK3 967 aa16.5■□□□□ 0.23
PDZRN3-205ENST00000466780 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
PDZRN3-205ENST00000466780 RSPH6AQ9H0K4 717 aa16.5■□□□□ 0.23
PDZRN3-205ENST00000466780 C14orf93Q9H972 538 aaKnown RBP16.5■□□□□ 0.23
PDZRN3-205ENST00000466780 GGT6Q6P531 493 aa16.49■□□□□ 0.23
PDZRN3-205ENST00000466780 DZIP1LQ8IYY4 767 aaKnown RBP16.49■□□□□ 0.23
PDZRN3-205ENST00000466780 ADGRB2O60241 1585 aa16.49■□□□□ 0.23
PDZRN3-205ENST00000466780 MCM4P33991 863 aa16.49■□□□□ 0.23
PDZRN3-205ENST00000466780 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
PDZRN3-205ENST00000466780 TMEM132EQ6IEE7 984 aa16.49■□□□□ 0.23
PDZRN3-205ENST00000466780 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
PDZRN3-205ENST00000466780 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
PDZRN3-205ENST00000466780 TSR2Q969E8 191 aaKnown RBP16.48■□□□□ 0.23
PDZRN3-205ENST00000466780 C22orf23Q9BZE7 217 aa16.48■□□□□ 0.23
PDZRN3-205ENST00000466780 FSD2A1L4K1 749 aa16.47■□□□□ 0.23
PDZRN3-205ENST00000466780 XRCC6P12956 609 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDZRN3-205ENST00000466780 FTSJ3Q8IY81 847 aaKnown RBP16.47■□□□□ 0.23
PDZRN3-205ENST00000466780 PPLO60437 1756 aa16.47■□□□□ 0.23
PDZRN3-205ENST00000466780 MFAP1P55081 439 aaKnown RBP16.47■□□□□ 0.23
PDZRN3-205ENST00000466780 LMTK2Q8IWU2 1503 aa16.47■□□□□ 0.23
PDZRN3-205ENST00000466780 TRIM27P14373 513 aa16.46■□□□□ 0.22
PDZRN3-205ENST00000466780 HDAC1Q13547 482 aaPredicted RBP16.45■□□□□ 0.22
PDZRN3-205ENST00000466780 ARXQ96QS3 562 aa16.45■□□□□ 0.22
PDZRN3-205ENST00000466780 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
PDZRN3-205ENST00000466780 SMC4Q9NTJ3 1288 aa16.45■□□□□ 0.22
PDZRN3-205ENST00000466780 CHMP5Q9NZZ3 219 aa16.45■□□□□ 0.22
PDZRN3-205ENST00000466780 CT47B1P0C2W7 299 aaPredicted RBP16.44■□□□□ 0.22
PDZRN3-205ENST00000466780 GZF1Q9H116 711 aaPredicted RBP16.44■□□□□ 0.22
PDZRN3-205ENST00000466780 KIDINS220Q9ULH0 1771 aa16.44■□□□□ 0.22
PDZRN3-205ENST00000466780 CD109Q6YHK3 1445 aa16.44■□□□□ 0.22
PDZRN3-205ENST00000466780 GOLGA6L3A6NEY3 463 aa16.44■□□□□ 0.22
PDZRN3-205ENST00000466780 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
PDZRN3-205ENST00000466780 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
PDZRN3-205ENST00000466780 TULP4Q9NRJ4 1543 aa16.43■□□□□ 0.22
PDZRN3-205ENST00000466780 PANK2Q9BZ23 570 aa16.43■□□□□ 0.22
PDZRN3-205ENST00000466780 NSD2O96028 1365 aa16.43■□□□□ 0.22
PDZRN3-205ENST00000466780 PLEKHF1Q96S99 279 aa16.42■□□□□ 0.22
PDZRN3-205ENST00000466780 ZNF692Q9BU19 519 aaPredicted RBP16.42■□□□□ 0.22
PDZRN3-205ENST00000466780 CFAP65Q6ZU64 1925 aaKnown RBP16.42■□□□□ 0.22
PDZRN3-205ENST00000466780 NPATQ14207 1427 aa16.42■□□□□ 0.22
PDZRN3-205ENST00000466780 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
PDZRN3-205ENST00000466780 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
PDZRN3-205ENST00000466780 TRIM35Q9UPQ4 493 aa16.42■□□□□ 0.22
PDZRN3-205ENST00000466780 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
PDZRN3-205ENST00000466780 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
PDZRN3-205ENST00000466780 TRAK2O60296 914 aa16.41■□□□□ 0.22
PDZRN3-205ENST00000466780 ATF7IPQ6VMQ6 1270 aa16.41■□□□□ 0.22
PDZRN3-205ENST00000466780 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
PDZRN3-205ENST00000466780 UBE2Q2Q8WVN8 375 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms