RNA–Protein interactions for RNA: ENST00000465864.1

KDM1A-203, Transcript of lysine demethylase 1A, humanhuman

TSL 5

Gene KDM1A, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-203ENST00000465864 ADGRL3Q9HAR2 1447 aa11.89□□□□□ -0.51
KDM1A-203ENST00000465864 DLC1Q96QB1 1528 aa11.89□□□□□ -0.51
KDM1A-203ENST00000465864 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
KDM1A-203ENST00000465864 ROBO1Q9Y6N7 1651 aa11.88□□□□□ -0.51
KDM1A-203ENST00000465864 FAM135BQ49AJ0 1406 aa11.88□□□□□ -0.51
KDM1A-203ENST00000465864 NUTM2FA1L443 756 aa11.88□□□□□ -0.51
KDM1A-203ENST00000465864 MST1RQ04912 1400 aa11.87□□□□□ -0.51
KDM1A-203ENST00000465864 DDX17Q92841 729 aaKnown RBP11.87□□□□□ -0.51
KDM1A-203ENST00000465864 HIRIP3Q9BW71 556 aaPredicted RBP11.87□□□□□ -0.51
KDM1A-203ENST00000465864 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
KDM1A-203ENST00000465864 ATF3P18847 181 aa11.86□□□□□ -0.51
KDM1A-203ENST00000465864 HSPA1LP34931 641 aa11.86□□□□□ -0.51
KDM1A-203ENST00000465864 ORAI2Q96SN7 254 aa11.86□□□□□ -0.51
KDM1A-203ENST00000465864 POGKQ9P215 609 aa11.86□□□□□ -0.51
KDM1A-203ENST00000465864 CADPS2Q86UW7 1296 aa11.85□□□□□ -0.51
KDM1A-203ENST00000465864 FMN2Q9NZ56 1722 aa11.85□□□□□ -0.51
KDM1A-203ENST00000465864 C1orf167Q5SNV9 1468 aa11.84□□□□□ -0.51
KDM1A-203ENST00000465864 RALGAPBQ86X10 1494 aa11.84□□□□□ -0.51
KDM1A-203ENST00000465864 ROCK2O75116 1388 aaKnown RBP11.84□□□□□ -0.51
KDM1A-203ENST00000465864 GPRASP1Q5JY77 1395 aa11.84□□□□□ -0.51
KDM1A-203ENST00000465864 BRINP3Q76B58 766 aa11.84□□□□□ -0.51
KDM1A-203ENST00000465864 USP32Q8NFA0 1604 aa11.84□□□□□ -0.51
KDM1A-203ENST00000465864 DCCP43146 1447 aa11.84□□□□□ -0.51
KDM1A-203ENST00000465864 QRICH2Q9H0J4 1663 aa11.83□□□□□ -0.52
KDM1A-203ENST00000465864 CDC42BPGQ6DT37 1551 aa11.83□□□□□ -0.52
KDM1A-203ENST00000465864 PRR36Q9H6K5 1346 aa11.83□□□□□ -0.52
KDM1A-203ENST00000465864 CARD11Q9BXL7 1154 aa11.82□□□□□ -0.52
KDM1A-203ENST00000465864 TIMELESSQ9UNS1 1208 aa11.82□□□□□ -0.52
KDM1A-203ENST00000465864 ADGRB2O60241 1585 aa11.81□□□□□ -0.52
KDM1A-203ENST00000465864 PHLPP1O60346 1717 aa11.8□□□□□ -0.52
KDM1A-203ENST00000465864 WASLO00401 505 aaPredicted RBP11.8□□□□□ -0.52
KDM1A-203ENST00000465864 CENPJQ9HC77 1338 aaPredicted RBP11.8□□□□□ -0.52
KDM1A-203ENST00000465864 NHSL1Q5SYE7 1610 aa11.79□□□□□ -0.52
KDM1A-203ENST00000465864 ESCO1Q5FWF5 840 aa11.79□□□□□ -0.52
KDM1A-203ENST00000465864 CDK19Q9BWU1 502 aa11.79□□□□□ -0.52
KDM1A-203ENST00000465864 TULP4Q9NRJ4 1543 aa11.78□□□□□ -0.52
KDM1A-203ENST00000465864 COL16A1Q07092 1604 aaPredicted RBP11.78□□□□□ -0.52
KDM1A-203ENST00000465864 ST20-MTHFSA0A0A6YYL1 179 aa11.77□□□□□ -0.53
KDM1A-203ENST00000465864 XPCQ01831 940 aaPredicted RBP11.77□□□□□ -0.53
KDM1A-203ENST00000465864 PMFBP1Q8TBY8 1022 aa11.77□□□□□ -0.53
KDM1A-203ENST00000465864 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
KDM1A-203ENST00000465864 AHDC1Q5TGY3 1603 aaPredicted RBP11.77□□□□□ -0.53
KDM1A-203ENST00000465864 FOXO3O43524 673 aa11.76□□□□□ -0.53
KDM1A-203ENST00000465864 NUDT16Q96DE0 195 aaKnown RBP11.76□□□□□ -0.53
KDM1A-203ENST00000465864 TESK2Q96S53 571 aa11.76□□□□□ -0.53
KDM1A-203ENST00000465864 ATP7BP35670 1465 aa11.75□□□□□ -0.53
KDM1A-203ENST00000465864 PHF8Q9UPP1 1060 aa11.74□□□□□ -0.53
KDM1A-203ENST00000465864 TOPAZ1Q8N9V7 1692 aa11.74□□□□□ -0.53
KDM1A-203ENST00000465864 SOS2Q07890 1332 aaPredicted RBP11.73□□□□□ -0.53
KDM1A-203ENST00000465864 PXDNQ92626 1479 aa11.73□□□□□ -0.53
KDM1A-203ENST00000465864 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
KDM1A-203ENST00000465864 USP47Q96K76 1375 aa11.72□□□□□ -0.53
KDM1A-203ENST00000465864 HSPA5P11021 654 aaKnown RBP11.71□□□□□ -0.53
KDM1A-203ENST00000465864 SRPK2P78362 688 aaKnown RBP11.71□□□□□ -0.53
KDM1A-203ENST00000465864 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.53
KDM1A-203ENST00000465864 KIF1AQ12756 1690 aa11.71□□□□□ -0.54
KDM1A-203ENST00000465864 ITSN1Q15811 1721 aa11.7□□□□□ -0.54
KDM1A-203ENST00000465864 TRPM3Q9HCF6 1732 aaPredicted RBP11.7□□□□□ -0.54
KDM1A-203ENST00000465864 CABP1Q9NZU7 370 aa11.7□□□□□ -0.54
KDM1A-203ENST00000465864 DISP3Q9P2K9 1392 aa11.69□□□□□ -0.54
KDM1A-203ENST00000465864 SBNO2Q9Y2G9 1366 aa11.69□□□□□ -0.54
KDM1A-203ENST00000465864 SHPRHQ149N8 1683 aa11.69□□□□□ -0.54
KDM1A-203ENST00000465864 ACEP12821 1306 aa11.69□□□□□ -0.54
KDM1A-203ENST00000465864 EVC2Q86UK5 1308 aa11.69□□□□□ -0.54
KDM1A-203ENST00000465864 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
KDM1A-203ENST00000465864 C11orf95C9JLR9 678 aaPredicted RBP11.69□□□□□ -0.54
KDM1A-203ENST00000465864 CCDC61Q9Y6R9 512 aa11.69□□□□□ -0.54
KDM1A-203ENST00000465864 EIF3AQ14152 1382 aaKnown RBP11.68□□□□□ -0.54
KDM1A-203ENST00000465864 NPHP3Q7Z494 1330 aa11.68□□□□□ -0.54
KDM1A-203ENST00000465864 PPIP5K1Q6PFW1 1433 aa11.68□□□□□ -0.54
KDM1A-203ENST00000465864 PNPLA6Q8IY17 1366 aa11.67□□□□□ -0.54
KDM1A-203ENST00000465864 PSME1Q06323 249 aa11.67□□□□□ -0.54
KDM1A-203ENST00000465864 LRRC59Q96AG4 307 aaKnown RBP11.67□□□□□ -0.54
KDM1A-203ENST00000465864 SLC12A5Q9H2X9 1139 aa11.67□□□□□ -0.54
KDM1A-203ENST00000465864 LRP6O75581 1613 aa11.67□□□□□ -0.54
KDM1A-203ENST00000465864 AKAP12Q02952 1782 aa11.67□□□□□ -0.54
KDM1A-203ENST00000465864 POLR3AO14802 1390 aaPredicted RBP11.67□□□□□ -0.54
KDM1A-203ENST00000465864 JCADQ9P266 1359 aa11.67□□□□□ -0.54
KDM1A-203ENST00000465864 SPATA31A3Q5VYP0 1347 aa11.66□□□□□ -0.54
KDM1A-203ENST00000465864 ALS2Q96Q42 1657 aa11.66□□□□□ -0.54
KDM1A-203ENST00000465864 NGDNQ8NEJ9 315 aaKnown RBP11.66□□□□□ -0.54
KDM1A-203ENST00000465864 CD163L1Q9NR16 1453 aa11.65□□□□□ -0.54
KDM1A-203ENST00000465864 NUTM2BA6NNL0 878 aaPredicted RBP11.65□□□□□ -0.54
KDM1A-203ENST00000465864 NUTM2EB1AL46 878 aaPredicted RBP11.65□□□□□ -0.54
KDM1A-203ENST00000465864 PLEKHG5O94827 1062 aa11.65□□□□□ -0.54
KDM1A-203ENST00000465864 NUTM2AQ8IVF1 878 aaPredicted RBP11.65□□□□□ -0.54
KDM1A-203ENST00000465864 CABLES1Q8TDN4 633 aa11.65□□□□□ -0.54
KDM1A-203ENST00000465864 MED1Q15648 1581 aaPredicted RBP11.65□□□□□ -0.54
KDM1A-203ENST00000465864 EIF4G2P78344 907 aaKnown RBP eCLIP11.64□□□□□ -0.55
KDM1A-203ENST00000465864 RGS17Q9UGC6 210 aaPredicted RBP11.64□□□□□ -0.55
KDM1A-203ENST00000465864 COL22A1Q8NFW1 1626 aaPredicted RBP11.64□□□□□ -0.55
KDM1A-203ENST00000465864 NUTM2GQ5VZR2 741 aa11.63□□□□□ -0.55
KDM1A-203ENST00000465864 CRYBG1Q9Y4K1 1723 aa11.63□□□□□ -0.55
KDM1A-203ENST00000465864 MYOM1P52179 1685 aa11.62□□□□□ -0.55
KDM1A-203ENST00000465864 CPSF1Q10570 1443 aaKnown RBP11.62□□□□□ -0.55
KDM1A-203ENST00000465864 SSH2Q76I76 1423 aa11.62□□□□□ -0.55
KDM1A-203ENST00000465864 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
KDM1A-203ENST00000465864 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
KDM1A-203ENST00000465864 ABCA3Q99758 1704 aa11.62□□□□□ -0.55
KDM1A-203ENST00000465864 SBNO1A3KN83 1393 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms