RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 NINLQ9Y2I6 1382 aa15.05■□□□□ -0
PDZRN3-203ENST00000462146 STAC3Q96MF2 364 aa15.05■□□□□ -0
PDZRN3-203ENST00000462146 PDZRN3Q9UPQ7 1066 aa15.05■□□□□ -0
PDZRN3-203ENST00000462146 MROH1Q8NDA8 1641 aa15.05■□□□□ -0
PDZRN3-203ENST00000462146 MYO3AQ8NEV4 1616 aa15.05■□□□□ -0
PDZRN3-203ENST00000462146 RTEL1-TNFRSF6BF6WH68 1400 aa15.04■□□□□ -0
PDZRN3-203ENST00000462146 MYOM2P54296 1465 aa15.04■□□□□ -0
PDZRN3-203ENST00000462146 ATP7AQ04656 1500 aa15.04■□□□□ -0
PDZRN3-203ENST00000462146 MORC1Q86VD1 984 aa15.04■□□□□ -0
PDZRN3-203ENST00000462146 SLC12A5Q9H2X9 1139 aa15.04■□□□□ -0
PDZRN3-203ENST00000462146 INO80Q9ULG1 1556 aaPredicted RBP15.03■□□□□ -0
PDZRN3-203ENST00000462146 SPRYD3Q8NCJ5 442 aa15.03■□□□□ -0
PDZRN3-203ENST00000462146 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
PDZRN3-203ENST00000462146 KANK1Q14678 1352 aa15.03■□□□□ -0
PDZRN3-203ENST00000462146 BECN1Q14457 450 aa15.03■□□□□ -0
PDZRN3-203ENST00000462146 RUNDC1Q96C34 613 aa15.03■□□□□ -0
PDZRN3-203ENST00000462146 ANTXR1Q9H6X2 564 aa15.03■□□□□ -0
PDZRN3-203ENST00000462146 ZC3H13Q5T200 1668 aaKnown RBP15.02■□□□□ -0
PDZRN3-203ENST00000462146 TRAK1Q9UPV9 953 aa15.02■□□□□ -0
PDZRN3-203ENST00000462146 QRICH2Q9H0J4 1663 aa15.02■□□□□ -0
PDZRN3-203ENST00000462146 NGEFQ8N5V2 710 aa15.01□□□□□ -0.01
PDZRN3-203ENST00000462146 ARXQ96QS3 562 aa15.01□□□□□ -0.01
PDZRN3-203ENST00000462146 TBC1D2Q9BYX2 928 aa15.01□□□□□ -0.01
PDZRN3-203ENST00000462146 PMFBP1Q8TBY8 1022 aa15.01□□□□□ -0.01
PDZRN3-203ENST00000462146 TBC1D32Q96NH3 1257 aa15.01□□□□□ -0.01
PDZRN3-203ENST00000462146 CYB5RLQ6IPT4 315 aa15□□□□□ -0.01
PDZRN3-203ENST00000462146 PPRC1Q5VV67 1664 aaKnown RBP15□□□□□ -0.01
PDZRN3-203ENST00000462146 NOS1P29475 1434 aa15□□□□□ -0.01
PDZRN3-203ENST00000462146 CHGAP10645 457 aaKnown RBP14.99□□□□□ -0.01
PDZRN3-203ENST00000462146 MTHFSP49914 203 aa14.99□□□□□ -0.01
PDZRN3-203ENST00000462146 NEURL4Q96JN8 1562 aa14.99□□□□□ -0.01
PDZRN3-203ENST00000462146 EIF5BO60841 1220 aaKnown RBP14.99□□□□□ -0.01
PDZRN3-203ENST00000462146 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
PDZRN3-203ENST00000462146 TMEM132EQ6IEE7 984 aa14.98□□□□□ -0.01
PDZRN3-203ENST00000462146 EFCAB6Q5THR3 1501 aa14.98□□□□□ -0.01
PDZRN3-203ENST00000462146 FAM43AQ8N2R8 423 aa14.98□□□□□ -0.01
PDZRN3-203ENST00000462146 ZNF518AQ6AHZ1 1483 aa14.97□□□□□ -0.01
PDZRN3-203ENST00000462146 NRXN1Q9ULB1 1477 aa14.97□□□□□ -0.01
PDZRN3-203ENST00000462146 SBNO2Q9Y2G9 1366 aa14.96□□□□□ -0.01
PDZRN3-203ENST00000462146 FANCAO15360 1455 aa14.96□□□□□ -0.01
PDZRN3-203ENST00000462146 TSR2Q969E8 191 aaKnown RBP14.96□□□□□ -0.01
PDZRN3-203ENST00000462146 UPF2Q9HAU5 1272 aaKnown RBP14.96□□□□□ -0.01
PDZRN3-203ENST00000462146 ABCA9Q8IUA7 1624 aa14.96□□□□□ -0.01
PDZRN3-203ENST00000462146 WDR63Q8IWG1 891 aa14.96□□□□□ -0.02
PDZRN3-203ENST00000462146 PPLO60437 1756 aa14.95□□□□□ -0.02
PDZRN3-203ENST00000462146 RRAGDQ9NQL2 400 aaPredicted RBP14.95□□□□□ -0.02
PDZRN3-203ENST00000462146 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
PDZRN3-203ENST00000462146 MVPQ14764 893 aaKnown RBP14.94□□□□□ -0.02
PDZRN3-203ENST00000462146 RWDD1Q9H446 243 aaPredicted RBP14.94□□□□□ -0.02
PDZRN3-203ENST00000462146 ADGRB3O60242 1522 aa14.94□□□□□ -0.02
PDZRN3-203ENST00000462146 ARAP3Q8WWN8 1544 aa14.94□□□□□ -0.02
PDZRN3-203ENST00000462146 SETBP1Q9Y6X0 1596 aa14.94□□□□□ -0.02
PDZRN3-203ENST00000462146 U2AF1L5P0DN76 240 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-203ENST00000462146 MFAP1P55081 439 aaKnown RBP14.93□□□□□ -0.02
PDZRN3-203ENST00000462146 U2AF1Q01081 240 aaKnown RBP eCLIP14.93□□□□□ -0.02
PDZRN3-203ENST00000462146 ADGRL1O94910 1474 aa14.93□□□□□ -0.02
PDZRN3-203ENST00000462146 USP32Q8NFA0 1604 aa14.93□□□□□ -0.02
PDZRN3-203ENST00000462146 GZF1Q9H116 711 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-203ENST00000462146 ADGRB1O14514 1584 aa14.92□□□□□ -0.02
PDZRN3-203ENST00000462146 NUTM2DQ5VT03 806 aaPredicted RBP14.92□□□□□ -0.02
PDZRN3-203ENST00000462146 KIDINS220Q9ULH0 1771 aa14.92□□□□□ -0.02
PDZRN3-203ENST00000462146 FTSJ3Q8IY81 847 aaKnown RBP14.92□□□□□ -0.02
PDZRN3-203ENST00000462146 ADGRB2O60241 1585 aa14.91□□□□□ -0.02
PDZRN3-203ENST00000462146 CCDC27Q2M243 656 aa14.91□□□□□ -0.02
PDZRN3-203ENST00000462146 ZKSCAN2Q63HK3 967 aa14.91□□□□□ -0.02
PDZRN3-203ENST00000462146 SENP3Q9H4L4 574 aaPredicted RBP14.91□□□□□ -0.02
PDZRN3-203ENST00000462146 DZIP1LQ8IYY4 767 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-203ENST00000462146 AAMPQ13685 434 aa14.9□□□□□ -0.02
PDZRN3-203ENST00000462146 CFAP53Q96M91 514 aa14.9□□□□□ -0.02
PDZRN3-203ENST00000462146 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
PDZRN3-203ENST00000462146 EXOSC9Q06265 439 aaKnown RBP14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 ZMYM3Q14202 1370 aa14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 PANK2Q9BZ23 570 aa14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 C22orf23Q9BZE7 217 aa14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 TRIM27P14373 513 aa14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 C14orf93Q9H972 538 aaKnown RBP14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 SMC4Q9NTJ3 1288 aa14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 TULP4Q9NRJ4 1543 aa14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 CD109Q6YHK3 1445 aa14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 XRCC6P12956 609 aaKnown RBP eCLIP14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 MCM4P33991 863 aa14.89□□□□□ -0.03
PDZRN3-203ENST00000462146 SAFB2Q14151 953 aaKnown RBP eCLIP14.88□□□□□ -0.03
PDZRN3-203ENST00000462146 L1TD1Q5T7N2 865 aaKnown RBP14.88□□□□□ -0.03
PDZRN3-203ENST00000462146 ITPRIPQ8IWB1 547 aa14.88□□□□□ -0.03
PDZRN3-203ENST00000462146 ARHGEF28Q8N1W1 1705 aaKnown RBP14.88□□□□□ -0.03
PDZRN3-203ENST00000462146 GLI2P10070 1586 aa14.87□□□□□ -0.03
PDZRN3-203ENST00000462146 SSH1Q8WYL5 1049 aa14.87□□□□□ -0.03
PDZRN3-203ENST00000462146 CABP2Q9NPB3 220 aa14.87□□□□□ -0.03
PDZRN3-203ENST00000462146 U2SURPO15042 1029 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-203ENST00000462146 NPATQ14207 1427 aa14.86□□□□□ -0.03
PDZRN3-203ENST00000462146 ASXL2Q76L83 1435 aa14.86□□□□□ -0.03
PDZRN3-203ENST00000462146 RSPH6AQ9H0K4 717 aa14.85□□□□□ -0.03
PDZRN3-203ENST00000462146 TRIM35Q9UPQ4 493 aa14.85□□□□□ -0.03
PDZRN3-203ENST00000462146 GOLGA6L3A6NEY3 463 aa14.85□□□□□ -0.03
PDZRN3-203ENST00000462146 NOB1Q9ULX3 412 aaKnown RBP14.85□□□□□ -0.03
PDZRN3-203ENST00000462146 FSD2A1L4K1 749 aa14.84□□□□□ -0.03
PDZRN3-203ENST00000462146 ANKRD36BQ8N2N9 1353 aa14.84□□□□□ -0.03
PDZRN3-203ENST00000462146 TMEM57Q8N5G2 664 aa14.84□□□□□ -0.03
PDZRN3-203ENST00000462146 PLEKHF1Q96S99 279 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms