RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PRAM1Q96QH2 718 aa15.21■□□□□ 0.03
TRAPPC12-213ENST00000461577 TONSLQ96HA7 1378 aa15.21■□□□□ 0.02
TRAPPC12-213ENST00000461577 PHLPP1O60346 1717 aa15.2■□□□□ 0.02
TRAPPC12-213ENST00000461577 SAFB2Q14151 953 aaKnown RBP eCLIP15.2■□□□□ 0.029e-7■■■□□ 15.2
TRAPPC12-213ENST00000461577 CDC42BPGQ6DT37 1551 aa15.19■□□□□ 0.02
TRAPPC12-213ENST00000461577 BRINP3Q76B58 766 aa15.19■□□□□ 0.02
TRAPPC12-213ENST00000461577 C1orf167Q5SNV9 1468 aa15.18■□□□□ 0.02
TRAPPC12-213ENST00000461577 NBPF1Q3BBV0 1214 aa15.17■□□□□ 0.02
TRAPPC12-213ENST00000461577 ARHGEF28Q8N1W1 1705 aaKnown RBP15.17■□□□□ 0.02
TRAPPC12-213ENST00000461577 FMN2Q9NZ56 1722 aa15.15■□□□□ 0.02
TRAPPC12-213ENST00000461577 AHDC1Q5TGY3 1603 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC12-213ENST00000461577 TRPM1Q7Z4N2 1603 aa15.15■□□□□ 0.02
TRAPPC12-213ENST00000461577 NUTM2FA1L443 756 aa15.15■□□□□ 0.02
TRAPPC12-213ENST00000461577 MINK1Q8N4C8 1332 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC12-213ENST00000461577 ESCO1Q5FWF5 840 aa15.13■□□□□ 0.01
TRAPPC12-213ENST00000461577 ORAI2Q96SN7 254 aa15.13■□□□□ 0.01
TRAPPC12-213ENST00000461577 COL16A1Q07092 1604 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC12-213ENST00000461577 NHSL1Q5SYE7 1610 aa15.13■□□□□ 0.01
TRAPPC12-213ENST00000461577 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
TRAPPC12-213ENST00000461577 ROCK2O75116 1388 aaKnown RBP15.12■□□□□ 0.01
TRAPPC12-213ENST00000461577 CCER1Q8TC90 406 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC12-213ENST00000461577 HIRIP3Q9BW71 556 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC12-213ENST00000461577 ADGRB2O60241 1585 aa15.11■□□□□ 0.01
TRAPPC12-213ENST00000461577 NBPF8Q3BBV2 869 aa15.11■□□□□ 0.01
TRAPPC12-213ENST00000461577 JCADQ9P266 1359 aa15.11■□□□□ 0.01
TRAPPC12-213ENST00000461577 DDX17Q92841 729 aaKnown RBP15.1■□□□□ 0.01
TRAPPC12-213ENST00000461577 RGPD8O14715 1765 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC12-213ENST00000461577 EIF3AQ14152 1382 aaKnown RBP15.1■□□□□ 0.01
TRAPPC12-213ENST00000461577 DISP3Q9P2K9 1392 aa15.1■□□□□ 0.01
TRAPPC12-213ENST00000461577 MED1Q15648 1581 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC12-213ENST00000461577 WASLO00401 505 aaPredicted RBP15.08■□□□□ 0
TRAPPC12-213ENST00000461577 KIF1AQ12756 1690 aa15.08■□□□□ 0
TRAPPC12-213ENST00000461577 CENPJQ9HC77 1338 aaPredicted RBP15.08■□□□□ 0
TRAPPC12-213ENST00000461577 LRRC59Q96AG4 307 aaKnown RBP15.07■□□□□ 0
TRAPPC12-213ENST00000461577 NPHP3Q7Z494 1330 aa15.07■□□□□ 0
TRAPPC12-213ENST00000461577 ANKARQ7Z5J8 1434 aa15.07■□□□□ 0
TRAPPC12-213ENST00000461577 QRICH2Q9H0J4 1663 aa15.06■□□□□ 0
TRAPPC12-213ENST00000461577 CARD11Q9BXL7 1154 aa15.06■□□□□ 0
TRAPPC12-213ENST00000461577 PHF8Q9UPP1 1060 aa15.06■□□□□ 0
TRAPPC12-213ENST00000461577 RALGAPBQ86X10 1494 aa15.06■□□□□ 0
TRAPPC12-213ENST00000461577 SHPRHQ149N8 1683 aa15.06■□□□□ 0
TRAPPC12-213ENST00000461577 FOXO3O43524 673 aa15.05■□□□□ -0
TRAPPC12-213ENST00000461577 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ -0
TRAPPC12-213ENST00000461577 TULP4Q9NRJ4 1543 aa15.05■□□□□ -0
TRAPPC12-213ENST00000461577 USP32Q8NFA0 1604 aa15.05■□□□□ -0
TRAPPC12-213ENST00000461577 GPRASP1Q5JY77 1395 aa15.04■□□□□ -0
TRAPPC12-213ENST00000461577 SOS2Q07890 1332 aaPredicted RBP15.04■□□□□ -0
TRAPPC12-213ENST00000461577 CDK19Q9BWU1 502 aa15.04■□□□□ -0
TRAPPC12-213ENST00000461577 TIMELESSQ9UNS1 1208 aa15.04■□□□□ -0
TRAPPC12-213ENST00000461577 SPATA31A6Q5VVP1 1343 aa15.03■□□□□ -0
TRAPPC12-213ENST00000461577 ITSN1Q15811 1721 aa15.03■□□□□ -0
TRAPPC12-213ENST00000461577 XPCQ01831 940 aaPredicted RBP15.02■□□□□ -0
TRAPPC12-213ENST00000461577 PMFBP1Q8TBY8 1022 aa15.02■□□□□ -0
TRAPPC12-213ENST00000461577 PRR36Q9H6K5 1346 aa15.01□□□□□ -0.01
TRAPPC12-213ENST00000461577 SRPK2P78362 688 aaKnown RBP15.01□□□□□ -0.01
TRAPPC12-213ENST00000461577 PSME1Q06323 249 aa15.01□□□□□ -0.01
TRAPPC12-213ENST00000461577 KRT28Q7Z3Y7 464 aa15.01□□□□□ -0.01
TRAPPC12-213ENST00000461577 NUDT16Q96DE0 195 aaKnown RBP15.01□□□□□ -0.01
TRAPPC12-213ENST00000461577 PXDNQ92626 1479 aa15.01□□□□□ -0.01
TRAPPC12-213ENST00000461577 PNPLA6Q8IY17 1366 aa15□□□□□ -0.01
TRAPPC12-213ENST00000461577 NUTM2BA6NNL0 878 aaPredicted RBP15□□□□□ -0.01
TRAPPC12-213ENST00000461577 NUTM2EB1AL46 878 aaPredicted RBP15□□□□□ -0.01
TRAPPC12-213ENST00000461577 MEX3CQ5U5Q3 659 aaKnown RBP15□□□□□ -0.01
TRAPPC12-213ENST00000461577 NUTM2AQ8IVF1 878 aaPredicted RBP15□□□□□ -0.01
TRAPPC12-213ENST00000461577 EVC2Q86UK5 1308 aa14.99□□□□□ -0.01
TRAPPC12-213ENST00000461577 NGDNQ8NEJ9 315 aaKnown RBP14.99□□□□□ -0.01
TRAPPC12-213ENST00000461577 ATP7BP35670 1465 aa14.99□□□□□ -0.01
TRAPPC12-213ENST00000461577 CABP2Q9NPB3 220 aa14.98□□□□□ -0.01
TRAPPC12-213ENST00000461577 CCDC61Q9Y6R9 512 aa14.97□□□□□ -0.01
TRAPPC12-213ENST00000461577 LRP6O75581 1613 aa14.96□□□□□ -0.01
TRAPPC12-213ENST00000461577 TOPAZ1Q8N9V7 1692 aa14.96□□□□□ -0.01
TRAPPC12-213ENST00000461577 SPATA31A3Q5VYP0 1347 aa14.95□□□□□ -0.02
TRAPPC12-213ENST00000461577 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
TRAPPC12-213ENST00000461577 SBNO1A3KN83 1393 aa14.95□□□□□ -0.02
TRAPPC12-213ENST00000461577 COL22A1Q8NFW1 1626 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC12-213ENST00000461577 TNS3Q68CZ2 1445 aa14.94□□□□□ -0.02
TRAPPC12-213ENST00000461577 PPIP5K1Q6PFW1 1433 aa14.93□□□□□ -0.02
TRAPPC12-213ENST00000461577 PLEKHG3A1L390 1219 aa14.93□□□□□ -0.02
TRAPPC12-213ENST00000461577 SBNO2Q9Y2G9 1366 aa14.93□□□□□ -0.02
TRAPPC12-213ENST00000461577 ACEP12821 1306 aa14.92□□□□□ -0.02
TRAPPC12-213ENST00000461577 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC12-213ENST00000461577 ADAMTS2O95450 1211 aa14.92□□□□□ -0.02
TRAPPC12-213ENST00000461577 ARHGEF10O15013 1369 aa14.92□□□□□ -0.02
TRAPPC12-213ENST00000461577 TRPM3Q9HCF6 1732 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC12-213ENST00000461577 ST20-MTHFSA0A0A6YYL1 179 aa14.91□□□□□ -0.02
TRAPPC12-213ENST00000461577 POLR3AO14802 1390 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC12-213ENST00000461577 ATAD2Q6PL18 1390 aa14.9□□□□□ -0.02
TRAPPC12-213ENST00000461577 USP47Q96K76 1375 aa14.9□□□□□ -0.02
TRAPPC12-213ENST00000461577 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
TRAPPC12-213ENST00000461577 PLEKHG5O94827 1062 aa14.9□□□□□ -0.02
TRAPPC12-213ENST00000461577 HAP1P54257 671 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC12-213ENST00000461577 C8orf37Q96NL8 207 aa14.9□□□□□ -0.02
TRAPPC12-213ENST00000461577 CABP1Q9NZU7 370 aa14.9□□□□□ -0.02
TRAPPC12-213ENST00000461577 RGS17Q9UGC6 210 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC12-213ENST00000461577 ALS2Q96Q42 1657 aa14.88□□□□□ -0.03
TRAPPC12-213ENST00000461577 ZNF772Q68DY9 489 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC12-213ENST00000461577 ILDR2Q71H61 639 aa14.88□□□□□ -0.03
TRAPPC12-213ENST00000461577 NGLY1Q96IV0 654 aa14.88□□□□□ -0.03
TRAPPC12-213ENST00000461577 MARF1Q9Y4F3 1742 aaKnown RBP14.87□□□□□ -0.03
TRAPPC12-213ENST00000461577 AFF2P51816 1311 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms