RNA–Protein interactions for RNA: ENST00000460641.1

ITGAV-205, Transcript of integrin subunit alpha V, humanhuman

TSL 5

Gene ITGAV, Length 604 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-205ENST00000460641 SPTLC1O15269 473 aa12.56□□□□□ -0.4
ITGAV-205ENST00000460641 GGCXP38435 758 aa12.56□□□□□ -0.4
ITGAV-205ENST00000460641 SLC6A16Q9GZN6 736 aa12.56□□□□□ -0.4
ITGAV-205ENST00000460641 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.56□□□□□ -0.4
ITGAV-205ENST00000460641 FAM160A2Q8N612 972 aaPredicted RBP12.55□□□□□ -0.4
ITGAV-205ENST00000460641 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
ITGAV-205ENST00000460641 SYMPKQ92797 1274 aaKnown RBP12.54□□□□□ -0.4
ITGAV-205ENST00000460641 USB1Q9BQ65 265 aaKnown RBP12.54□□□□□ -0.4
ITGAV-205ENST00000460641 C6orf229H3BNL8 230 aa12.53□□□□□ -0.4
ITGAV-205ENST00000460641 S1PR4O95977 384 aa12.53□□□□□ -0.4
ITGAV-205ENST00000460641 PCDHB15Q9Y5E8 787 aa12.53□□□□□ -0.4
ITGAV-205ENST00000460641 POLR3EQ9NVU0 708 aa12.52□□□□□ -0.41
ITGAV-205ENST00000460641 SKIV2LQ15477 1246 aaKnown RBP12.51□□□□□ -0.41
ITGAV-205ENST00000460641 MSS51Q4VC12 460 aa12.51□□□□□ -0.41
ITGAV-205ENST00000460641 LIMD1Q9UGP4 676 aa12.51□□□□□ -0.41
ITGAV-205ENST00000460641 RNF223E7ERA6 249 aa12.5□□□□□ -0.41
ITGAV-205ENST00000460641 RETREG3Q86VR2 466 aa12.5□□□□□ -0.41
ITGAV-205ENST00000460641 CLK2P49760 499 aaKnown RBP12.49□□□□□ -0.41
ITGAV-205ENST00000460641 MTMR2Q13614 643 aa12.49□□□□□ -0.41
ITGAV-205ENST00000460641 TUSC1Q2TAM9 212 aa12.49□□□□□ -0.41
ITGAV-205ENST00000460641 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
ITGAV-205ENST00000460641 SPDYE5A6NIY4 337 aa12.48□□□□□ -0.41
ITGAV-205ENST00000460641 CSPP1Q1MSJ5 1256 aa12.48□□□□□ -0.41
ITGAV-205ENST00000460641 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
ITGAV-205ENST00000460641 PRPF38BQ5VTL8 546 aaKnown RBP12.47□□□□□ -0.41
ITGAV-205ENST00000460641 ZBTB3Q9H5J0 574 aa12.47□□□□□ -0.41
ITGAV-205ENST00000460641 PRDM9Q9NQV7 894 aa12.47□□□□□ -0.41
ITGAV-205ENST00000460641 HRCP23327 699 aa12.46□□□□□ -0.41
ITGAV-205ENST00000460641 RGS20O76081 388 aa12.45□□□□□ -0.42
ITGAV-205ENST00000460641 MMP16P51512 607 aa12.45□□□□□ -0.42
ITGAV-205ENST00000460641 ANKLE1Q8NAG6 615 aa12.45□□□□□ -0.42
ITGAV-205ENST00000460641 CABLES1Q8TDN4 633 aa12.44□□□□□ -0.42
ITGAV-205ENST00000460641 GOPCQ9HD26 462 aa12.44□□□□□ -0.42
ITGAV-205ENST00000460641 ATP1B4Q9UN42 357 aaPredicted RBP12.44□□□□□ -0.42
ITGAV-205ENST00000460641 NUTM2BA6NNL0 878 aaPredicted RBP12.43□□□□□ -0.42
ITGAV-205ENST00000460641 NUTM2EB1AL46 878 aaPredicted RBP12.43□□□□□ -0.42
ITGAV-205ENST00000460641 LILRB3O75022 631 aa12.43□□□□□ -0.42
ITGAV-205ENST00000460641 QPCTQ16769 361 aa12.43□□□□□ -0.42
ITGAV-205ENST00000460641 NUTM2DQ5VT03 806 aaPredicted RBP12.43□□□□□ -0.42
ITGAV-205ENST00000460641 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
ITGAV-205ENST00000460641 PROCA1Q8NCQ7 364 aaPredicted RBP12.43□□□□□ -0.42
ITGAV-205ENST00000460641 PRR7Q8TB68 274 aa12.43□□□□□ -0.42
ITGAV-205ENST00000460641 DXOO77932 396 aaKnown RBP12.42□□□□□ -0.42
ITGAV-205ENST00000460641 JUNDP17535 347 aa12.4□□□□□ -0.42
ITGAV-205ENST00000460641 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.4□□□□□ -0.42
ITGAV-205ENST00000460641 FCF1Q9Y324 198 aaKnown RBP12.4□□□□□ -0.42
ITGAV-205ENST00000460641 PCMTD1Q96MG8 357 aaPredicted RBP12.39□□□□□ -0.43
ITGAV-205ENST00000460641 CFAP99D6REC4 459 aa12.38□□□□□ -0.43
ITGAV-205ENST00000460641 RTL5Q5HYW3 569 aaPredicted RBP12.38□□□□□ -0.43
ITGAV-205ENST00000460641 DESI1Q6ICB0 168 aa12.38□□□□□ -0.43
ITGAV-205ENST00000460641 PRKD2Q9BZL6 878 aa12.38□□□□□ -0.43
ITGAV-205ENST00000460641 PLA2G2CQ5R387 149 aa12.36□□□□□ -0.43
ITGAV-205ENST00000460641 V9GY48 417 aaPredicted RBP12.36□□□□□ -0.43
ITGAV-205ENST00000460641 SLC19A1P41440 591 aa12.35□□□□□ -0.43
ITGAV-205ENST00000460641 CCDC24Q8N4L8 307 aa12.34□□□□□ -0.43
ITGAV-205ENST00000460641 FBXO31Q5XUX0 539 aaPredicted RBP12.33□□□□□ -0.44
ITGAV-205ENST00000460641 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
ITGAV-205ENST00000460641 LIAT1Q6ZQX7 453 aa12.33□□□□□ -0.44
ITGAV-205ENST00000460641 TSC1Q92574 1164 aa12.33□□□□□ -0.44
ITGAV-205ENST00000460641 EMID1Q96A84 441 aaPredicted RBP12.33□□□□□ -0.44
ITGAV-205ENST00000460641 PTPRNQ16849 979 aa12.32□□□□□ -0.44
ITGAV-205ENST00000460641 NUDT12Q9BQG2 462 aa12.32□□□□□ -0.44
ITGAV-205ENST00000460641 LYPD8Q6UX82 237 aa12.31□□□□□ -0.44
ITGAV-205ENST00000460641 ZBTB24O43167 697 aaPredicted RBP12.3□□□□□ -0.44
ITGAV-205ENST00000460641 CCNYL3P0C7X3 344 aa12.3□□□□□ -0.44
ITGAV-205ENST00000460641 HELBQ8NG08 1087 aaPredicted RBP12.3□□□□□ -0.44
ITGAV-205ENST00000460641 RPIAP49247 311 aa12.29□□□□□ -0.44
ITGAV-205ENST00000460641 SPRYD7Q5W111 196 aa12.28□□□□□ -0.44
ITGAV-205ENST00000460641 EVA1BQ9NVM1 165 aa12.28□□□□□ -0.44
ITGAV-205ENST00000460641 PER1O15534 1290 aaPredicted RBP12.27□□□□□ -0.45
ITGAV-205ENST00000460641 CD2BP2O95400 341 aaKnown RBP12.27□□□□□ -0.45
ITGAV-205ENST00000460641 RFC5P40937 340 aa12.26□□□□□ -0.45
ITGAV-205ENST00000460641 CTDSPL2Q05D32 466 aa12.26□□□□□ -0.45
ITGAV-205ENST00000460641 KCNH2Q12809 1159 aa12.25□□□□□ -0.45
ITGAV-205ENST00000460641 PTCRAQ6ISU1 281 aaPredicted RBP12.25□□□□□ -0.45
ITGAV-205ENST00000460641 ZNF598Q86UK7 904 aaKnown RBP12.24□□□□□ -0.45
ITGAV-205ENST00000460641 AP1G2O75843 785 aa12.23□□□□□ -0.45
ITGAV-205ENST00000460641 CTHP32929 405 aa12.22□□□□□ -0.45
ITGAV-205ENST00000460641 TRIM32Q13049 653 aa12.21□□□□□ -0.45
ITGAV-205ENST00000460641 TMEM259Q4ZIN3 620 aa12.21□□□□□ -0.45
ITGAV-205ENST00000460641 ZNF697Q5TEC3 545 aa12.21□□□□□ -0.45
ITGAV-205ENST00000460641 F12P00748 615 aaPredicted RBP12.2□□□□□ -0.46
ITGAV-205ENST00000460641 UNC93B1Q9H1C4 597 aa12.2□□□□□ -0.46
ITGAV-205ENST00000460641 MAP10Q9P2G4 905 aa12.19□□□□□ -0.46
ITGAV-205ENST00000460641 LRRN4Q8WUT4 740 aa12.18□□□□□ -0.46
ITGAV-205ENST00000460641 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
ITGAV-205ENST00000460641 USP17L8P0C7I0 530 aa12.15□□□□□ -0.46
ITGAV-205ENST00000460641 BAP1Q92560 729 aa12.14□□□□□ -0.47
ITGAV-205ENST00000460641 IRX2Q9BZI1 471 aaPredicted RBP12.14□□□□□ -0.47
ITGAV-205ENST00000460641 GDF9O60383 454 aa12.13□□□□□ -0.47
ITGAV-205ENST00000460641 WNT7BP56706 349 aa12.13□□□□□ -0.47
ITGAV-205ENST00000460641 FOXC1Q12948 553 aa12.13□□□□□ -0.47
ITGAV-205ENST00000460641 TRIM67Q6ZTA4 783 aa12.13□□□□□ -0.47
ITGAV-205ENST00000460641 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
ITGAV-205ENST00000460641 SKOR1P84550 965 aa12.12□□□□□ -0.47
ITGAV-205ENST00000460641 BANK1Q8NDB2 785 aa12.12□□□□□ -0.47
ITGAV-205ENST00000460641 PKD2L1Q9P0L9 805 aa12.12□□□□□ -0.47
ITGAV-205ENST00000460641 GFRA3O60609 400 aa12.11□□□□□ -0.47
ITGAV-205ENST00000460641 SH3BP2P78314 561 aa12.11□□□□□ -0.47
ITGAV-205ENST00000460641 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms