RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
UPF2-204ENST00000460569 ADGRL3Q9HAR2 1447 aa14.32□□□□□ -0.12
UPF2-204ENST00000460569 HSPA5P11021 654 aaKnown RBP14.32□□□□□ -0.12
UPF2-204ENST00000460569 C14orf37Q86TY3 774 aa14.32□□□□□ -0.12
UPF2-204ENST00000460569 CDC42BPGQ6DT37 1551 aa14.31□□□□□ -0.12
UPF2-204ENST00000460569 ST20-MTHFSA0A0A6YYL1 179 aa14.31□□□□□ -0.12
UPF2-204ENST00000460569 MINK1Q8N4C8 1332 aaPredicted RBP14.31□□□□□ -0.12
UPF2-204ENST00000460569 NCOA3Q9Y6Q9 1424 aa14.31□□□□□ -0.12
UPF2-204ENST00000460569 SBNO2Q9Y2G9 1366 aa14.3□□□□□ -0.12
UPF2-204ENST00000460569 TULP4Q9NRJ4 1543 aa14.3□□□□□ -0.12
UPF2-204ENST00000460569 FMN2Q9NZ56 1722 aa14.29□□□□□ -0.12
UPF2-204ENST00000460569 HIRIP3Q9BW71 556 aaPredicted RBP14.29□□□□□ -0.12
UPF2-204ENST00000460569 MSH6P52701 1360 aa14.29□□□□□ -0.12
UPF2-204ENST00000460569 DCCP43146 1447 aa14.26□□□□□ -0.13
UPF2-204ENST00000460569 TESK2Q96S53 571 aa14.26□□□□□ -0.13
UPF2-204ENST00000460569 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
UPF2-204ENST00000460569 RGPD8O14715 1765 aaPredicted RBP14.24□□□□□ -0.13
UPF2-204ENST00000460569 ITSN1Q15811 1721 aa14.24□□□□□ -0.13
UPF2-204ENST00000460569 DISP3Q9P2K9 1392 aa14.24□□□□□ -0.13
UPF2-204ENST00000460569 EVC2Q86UK5 1308 aa14.24□□□□□ -0.13
UPF2-204ENST00000460569 USP32Q8NFA0 1604 aa14.24□□□□□ -0.13
UPF2-204ENST00000460569 C19orf44Q9H6X5 657 aa14.24□□□□□ -0.13
UPF2-204ENST00000460569 WASLO00401 505 aaPredicted RBP14.23□□□□□ -0.13
UPF2-204ENST00000460569 ATF3P18847 181 aa14.23□□□□□ -0.13
UPF2-204ENST00000460569 TMF1P82094 1093 aa14.23□□□□□ -0.13
UPF2-204ENST00000460569 TOPAZ1Q8N9V7 1692 aa14.23□□□□□ -0.13
UPF2-204ENST00000460569 SLC24A1O60721 1099 aa14.22□□□□□ -0.13
UPF2-204ENST00000460569 SRPK2P78362 688 aaKnown RBP14.22□□□□□ -0.13
UPF2-204ENST00000460569 CDK19Q9BWU1 502 aa14.22□□□□□ -0.13
UPF2-204ENST00000460569 ATP7BP35670 1465 aa14.21□□□□□ -0.13
UPF2-204ENST00000460569 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.13
UPF2-204ENST00000460569 CERKQ8TCT0 537 aa14.21□□□□□ -0.13
UPF2-204ENST00000460569 MST1RQ04912 1400 aa14.21□□□□□ -0.13
UPF2-204ENST00000460569 MYOM1P52179 1685 aa14.2□□□□□ -0.14
UPF2-204ENST00000460569 NUTM2FA1L443 756 aa14.2□□□□□ -0.14
UPF2-204ENST00000460569 CABP2Q9NPB3 220 aa14.2□□□□□ -0.14
UPF2-204ENST00000460569 ANKARQ7Z5J8 1434 aa14.2□□□□□ -0.14
UPF2-204ENST00000460569 KIF1AQ12756 1690 aa14.18□□□□□ -0.14
UPF2-204ENST00000460569 CDCA8Q53HL2 280 aa14.18□□□□□ -0.14
UPF2-204ENST00000460569 POLR3GLQ9BT43 218 aa14.18□□□□□ -0.14
UPF2-204ENST00000460569 ATAD2Q6PL18 1390 aa14.18□□□□□ -0.14
UPF2-204ENST00000460569 C1orf167Q5SNV9 1468 aa14.18□□□□□ -0.14
UPF2-204ENST00000460569 PRR36Q9H6K5 1346 aa14.17□□□□□ -0.14
UPF2-204ENST00000460569 C11orf95C9JLR9 678 aaPredicted RBP14.16□□□□□ -0.14
UPF2-204ENST00000460569 NUDT16Q96DE0 195 aaKnown RBP14.16□□□□□ -0.14
UPF2-204ENST00000460569 ROBO1Q9Y6N7 1651 aa14.16□□□□□ -0.14
UPF2-204ENST00000460569 KIF7Q2M1P5 1343 aa14.15□□□□□ -0.14
UPF2-204ENST00000460569 PPIP5K1Q6PFW1 1433 aa14.15□□□□□ -0.14
UPF2-204ENST00000460569 CCDC7Q96M83 1385 aa14.15□□□□□ -0.14
UPF2-204ENST00000460569 UBAP1LF5GYI3 381 aa14.14□□□□□ -0.15
UPF2-204ENST00000460569 PUS7Q96PZ0 661 aaKnown RBP14.14□□□□□ -0.15
UPF2-204ENST00000460569 SLAIN2Q9P270 581 aa14.14□□□□□ -0.15
UPF2-204ENST00000460569 AKAP12Q02952 1782 aa14.14□□□□□ -0.15
UPF2-204ENST00000460569 WASHC2AQ641Q2 1341 aa14.14□□□□□ -0.15
UPF2-204ENST00000460569 TOM1O60784 492 aa14.13□□□□□ -0.15
UPF2-204ENST00000460569 ESCO1Q5FWF5 840 aa14.13□□□□□ -0.15
UPF2-204ENST00000460569 TMC1Q8TDI8 760 aa14.13□□□□□ -0.15
UPF2-204ENST00000460569 CCDC61Q9Y6R9 512 aa14.13□□□□□ -0.15
UPF2-204ENST00000460569 NINLQ9Y2I6 1382 aa14.12□□□□□ -0.15
UPF2-204ENST00000460569 ZNF316A6NFI3 1004 aaPredicted RBP14.12□□□□□ -0.15
UPF2-204ENST00000460569 ORAI2Q96SN7 254 aa14.12□□□□□ -0.15
UPF2-204ENST00000460569 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
UPF2-204ENST00000460569 NHSL1Q5SYE7 1610 aa14.12□□□□□ -0.15
UPF2-204ENST00000460569 MON2Q7Z3U7 1717 aa14.11□□□□□ -0.15
UPF2-204ENST00000460569 PHF8Q9UPP1 1060 aa14.11□□□□□ -0.15
UPF2-204ENST00000460569 PMFBP1Q8TBY8 1022 aa14.1□□□□□ -0.15
UPF2-204ENST00000460569 CABP1Q9NZU7 370 aa14.1□□□□□ -0.15
UPF2-204ENST00000460569 PIP4K2BP78356 416 aa14.09□□□□□ -0.15
UPF2-204ENST00000460569 BRINP3Q76B58 766 aa14.09□□□□□ -0.15
UPF2-204ENST00000460569 SLC12A5Q9H2X9 1139 aa14.09□□□□□ -0.15
UPF2-204ENST00000460569 CD163L1Q9NR16 1453 aa14.08□□□□□ -0.16
UPF2-204ENST00000460569 PLEKHG3A1L390 1219 aa14.08□□□□□ -0.16
UPF2-204ENST00000460569 NGDNQ8NEJ9 315 aaKnown RBP14.08□□□□□ -0.16
UPF2-204ENST00000460569 ACEP12821 1306 aa14.08□□□□□ -0.16
UPF2-204ENST00000460569 NRKQ7Z2Y5 1582 aa14.08□□□□□ -0.16
UPF2-204ENST00000460569 POLR3AO14802 1390 aaPredicted RBP14.08□□□□□ -0.16
UPF2-204ENST00000460569 AHDC1Q5TGY3 1603 aaPredicted RBP14.08□□□□□ -0.16
UPF2-204ENST00000460569 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
UPF2-204ENST00000460569 A0A1W2PP64 1363 aa14.07□□□□□ -0.16
UPF2-204ENST00000460569 ANKRD36BQ8N2N9 1353 aa14.07□□□□□ -0.16
UPF2-204ENST00000460569 HDGFL2Q7Z4V5 671 aaPredicted RBP14.06□□□□□ -0.16
UPF2-204ENST00000460569 TERF2IPQ9NYB0 399 aa14.06□□□□□ -0.16
UPF2-204ENST00000460569 TRPM3Q9HCF6 1732 aaPredicted RBP14.06□□□□□ -0.16
UPF2-204ENST00000460569 CPSF1Q10570 1443 aaKnown RBP14.06□□□□□ -0.16
UPF2-204ENST00000460569 FOXO3O43524 673 aa14.05□□□□□ -0.16
UPF2-204ENST00000460569 NPHP3Q7Z494 1330 aa14.05□□□□□ -0.16
UPF2-204ENST00000460569 KTN1Q86UP2 1357 aaKnown RBP14.05□□□□□ -0.16
UPF2-204ENST00000460569 USP6P35125 1406 aa14.05□□□□□ -0.16
UPF2-204ENST00000460569 PXDNQ92626 1479 aa14.05□□□□□ -0.16
UPF2-204ENST00000460569 KIF20BQ96Q89 1820 aa14.04□□□□□ -0.16
UPF2-204ENST00000460569 DDX17Q92841 729 aaKnown RBP14.04□□□□□ -0.16
UPF2-204ENST00000460569 XPCQ01831 940 aaPredicted RBP14.03□□□□□ -0.16
UPF2-204ENST00000460569 PSME1Q06323 249 aa14.03□□□□□ -0.16
UPF2-204ENST00000460569 COL16A1Q07092 1604 aaPredicted RBP14.03□□□□□ -0.16
UPF2-204ENST00000460569 ALS2Q96Q42 1657 aa14.02□□□□□ -0.16
UPF2-204ENST00000460569 EDC4Q6P2E9 1401 aaKnown RBP14.02□□□□□ -0.16
UPF2-204ENST00000460569 NSD3Q9BZ95 1437 aa14.02□□□□□ -0.16
UPF2-204ENST00000460569 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
UPF2-204ENST00000460569 PANK3Q9H999 370 aa14.02□□□□□ -0.17
UPF2-204ENST00000460569 DDX10Q13206 875 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms