RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 EVX2Q03828 476 aa14.3□□□□□ -0.12
VPS45-204ENST00000460366 ZNF335Q9H4Z2 1342 aaPredicted RBP14.29□□□□□ -0.12
VPS45-204ENST00000460366 TONSLQ96HA7 1378 aa14.28□□□□□ -0.12
VPS45-204ENST00000460366 NRXN3Q9Y4C0 1643 aa14.28□□□□□ -0.12
VPS45-204ENST00000460366 ALKQ9UM73 1620 aa14.27□□□□□ -0.12
VPS45-204ENST00000460366 METP08581 1390 aa14.27□□□□□ -0.12
VPS45-204ENST00000460366 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.13
VPS45-204ENST00000460366 CFAP70Q5T0N1 1121 aa14.26□□□□□ -0.13
VPS45-204ENST00000460366 CPS1P31327 1500 aa14.25□□□□□ -0.13
VPS45-204ENST00000460366 ILDR2Q71H61 639 aa14.25□□□□□ -0.13
VPS45-204ENST00000460366 AMOTL2Q9Y2J4 779 aa14.25□□□□□ -0.13
VPS45-204ENST00000460366 LTBP4Q8N2S1 1624 aa14.25□□□□□ -0.13
VPS45-204ENST00000460366 PRAG1Q86YV5 1406 aa14.24□□□□□ -0.13
VPS45-204ENST00000460366 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
VPS45-204ENST00000460366 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
VPS45-204ENST00000460366 PTPRUQ92729 1446 aa14.24□□□□□ -0.13
VPS45-204ENST00000460366 ABCC11Q96J66 1382 aa14.22□□□□□ -0.13
VPS45-204ENST00000460366 NWD1Q149M9 1564 aa14.22□□□□□ -0.13
VPS45-204ENST00000460366 SIRT1Q96EB6 747 aa14.22□□□□□ -0.13
VPS45-204ENST00000460366 NKTRP30414 1462 aaKnown RBP14.22□□□□□ -0.13
VPS45-204ENST00000460366 NCOA3Q9Y6Q9 1424 aa14.22□□□□□ -0.13
VPS45-204ENST00000460366 LAMC1P11047 1609 aa14.22□□□□□ -0.13
VPS45-204ENST00000460366 CHD2O14647 1828 aaKnown RBP14.22□□□□□ -0.13
VPS45-204ENST00000460366 LRPPRCP42704 1394 aaKnown RBP14.22□□□□□ -0.13
VPS45-204ENST00000460366 TMEM132EQ6IEE7 984 aa14.21□□□□□ -0.13
VPS45-204ENST00000460366 PROSER2Q86WR7 435 aaPredicted RBP14.21□□□□□ -0.13
VPS45-204ENST00000460366 CERKQ8TCT0 537 aa14.21□□□□□ -0.13
VPS45-204ENST00000460366 SETD1AO15047 1707 aaKnown RBP14.21□□□□□ -0.14
VPS45-204ENST00000460366 IQSEC2Q5JU85 1478 aa14.19□□□□□ -0.14
VPS45-204ENST00000460366 TECPR2O15040 1411 aa14.19□□□□□ -0.14
VPS45-204ENST00000460366 YTHDC2Q9H6S0 1430 aaKnown RBP14.19□□□□□ -0.14
VPS45-204ENST00000460366 NBPF8Q3BBV2 869 aa14.19□□□□□ -0.14
VPS45-204ENST00000460366 LRRC7Q96NW7 1537 aa14.19□□□□□ -0.14
VPS45-204ENST00000460366 KIAA1210Q9ULL0 1709 aa14.18□□□□□ -0.14
VPS45-204ENST00000460366 PTCH1Q13635 1447 aa14.18□□□□□ -0.14
VPS45-204ENST00000460366 STRCP1A6NGW2 1772 aa14.18□□□□□ -0.14
VPS45-204ENST00000460366 ADGRB1O14514 1584 aa14.17□□□□□ -0.14
VPS45-204ENST00000460366 ASXL1Q8IXJ9 1541 aa14.17□□□□□ -0.14
VPS45-204ENST00000460366 NBPF1Q3BBV0 1214 aa14.17□□□□□ -0.14
VPS45-204ENST00000460366 XRN1Q8IZH2 1706 aaKnown RBP14.17□□□□□ -0.14
VPS45-204ENST00000460366 TMEM94Q12767 1356 aa14.17□□□□□ -0.14
VPS45-204ENST00000460366 STK26Q9P289 416 aa14.16□□□□□ -0.14
VPS45-204ENST00000460366 ROBO2Q9HCK4 1378 aa14.16□□□□□ -0.14
VPS45-204ENST00000460366 FAM135BQ49AJ0 1406 aa14.15□□□□□ -0.14
VPS45-204ENST00000460366 GPRASP1Q5JY77 1395 aa14.15□□□□□ -0.14
VPS45-204ENST00000460366 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
VPS45-204ENST00000460366 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
VPS45-204ENST00000460366 DLC1Q96QB1 1528 aa14.14□□□□□ -0.15
VPS45-204ENST00000460366 ROCK2O75116 1388 aaKnown RBP14.13□□□□□ -0.15
VPS45-204ENST00000460366 TRAK1Q9UPV9 953 aa14.13□□□□□ -0.15
VPS45-204ENST00000460366 RALGAPBQ86X10 1494 aa14.12□□□□□ -0.15
VPS45-204ENST00000460366 TRPM1Q7Z4N2 1603 aa14.12□□□□□ -0.15
VPS45-204ENST00000460366 MSH6P52701 1360 aa14.11□□□□□ -0.15
VPS45-204ENST00000460366 DISP3Q9P2K9 1392 aa14.11□□□□□ -0.15
VPS45-204ENST00000460366 KNDC1Q76NI1 1749 aa14.11□□□□□ -0.15
VPS45-204ENST00000460366 WAPLQ7Z5K2 1190 aa14.11□□□□□ -0.15
VPS45-204ENST00000460366 C14orf37Q86TY3 774 aa14.1□□□□□ -0.15
VPS45-204ENST00000460366 RBM33Q96EV2 1170 aaKnown RBP14.1□□□□□ -0.15
VPS45-204ENST00000460366 PRAM1Q96QH2 718 aa14.1□□□□□ -0.15
VPS45-204ENST00000460366 CARD11Q9BXL7 1154 aa14.1□□□□□ -0.15
VPS45-204ENST00000460366 POGKQ9P215 609 aa14.1□□□□□ -0.15
VPS45-204ENST00000460366 DCCP43146 1447 aa14.09□□□□□ -0.15
VPS45-204ENST00000460366 ADGRL3Q9HAR2 1447 aa14.09□□□□□ -0.15
VPS45-204ENST00000460366 TOM1O60784 492 aa14.09□□□□□ -0.15
VPS45-204ENST00000460366 CADPS2Q86UW7 1296 aa14.09□□□□□ -0.15
VPS45-204ENST00000460366 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.16
VPS45-204ENST00000460366 PLEKHH1Q9ULM0 1364 aa14.08□□□□□ -0.16
VPS45-204ENST00000460366 ATF3P18847 181 aa14.07□□□□□ -0.16
VPS45-204ENST00000460366 XIRP1Q702N8 1843 aaKnown RBP14.06□□□□□ -0.16
VPS45-204ENST00000460366 UBAP1LF5GYI3 381 aa14.06□□□□□ -0.16
VPS45-204ENST00000460366 EIF3AQ14152 1382 aaKnown RBP14.06□□□□□ -0.16
VPS45-204ENST00000460366 CENPJQ9HC77 1338 aaPredicted RBP14.05□□□□□ -0.16
VPS45-204ENST00000460366 SLAIN2Q9P270 581 aa14.04□□□□□ -0.16
VPS45-204ENST00000460366 SLC24A1O60721 1099 aa14.03□□□□□ -0.16
VPS45-204ENST00000460366 SAFB2Q14151 953 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS45-204ENST00000460366 ARHGEF28Q8N1W1 1705 aaKnown RBP14.02□□□□□ -0.16
VPS45-204ENST00000460366 MIER1Q8N108 512 aa14.02□□□□□ -0.17
VPS45-204ENST00000460366 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.01□□□□□ -0.17
VPS45-204ENST00000460366 SBNO2Q9Y2G9 1366 aa14.01□□□□□ -0.17
VPS45-204ENST00000460366 MINK1Q8N4C8 1332 aaPredicted RBP14.01□□□□□ -0.17
VPS45-204ENST00000460366 CDC42BPGQ6DT37 1551 aa14□□□□□ -0.17
VPS45-204ENST00000460366 WASLO00401 505 aaPredicted RBP14□□□□□ -0.17
VPS45-204ENST00000460366 ZEB1P37275 1124 aaPredicted RBP14□□□□□ -0.17
VPS45-204ENST00000460366 ADGRB2O60241 1585 aa14□□□□□ -0.17
VPS45-204ENST00000460366 MST1RQ04912 1400 aa13.99□□□□□ -0.17
VPS45-204ENST00000460366 USP47Q96K76 1375 aa13.99□□□□□ -0.17
VPS45-204ENST00000460366 NALCNQ8IZF0 1738 aa13.99□□□□□ -0.17
VPS45-204ENST00000460366 ST20-MTHFSA0A0A6YYL1 179 aa13.98□□□□□ -0.17
VPS45-204ENST00000460366 HIRIP3Q9BW71 556 aaPredicted RBP13.98□□□□□ -0.17
VPS45-204ENST00000460366 CDK19Q9BWU1 502 aa13.97□□□□□ -0.17
VPS45-204ENST00000460366 C1orf167Q5SNV9 1468 aa13.97□□□□□ -0.17
VPS45-204ENST00000460366 ANKARQ7Z5J8 1434 aa13.97□□□□□ -0.17
VPS45-204ENST00000460366 EVC2Q86UK5 1308 aa13.96□□□□□ -0.17
VPS45-204ENST00000460366 EIF4G2P78344 907 aaKnown RBP eCLIP13.96□□□□□ -0.17
VPS45-204ENST00000460366 PIP4K2BP78356 416 aa13.96□□□□□ -0.17
VPS45-204ENST00000460366 PUS7Q96PZ0 661 aaKnown RBP13.96□□□□□ -0.17
VPS45-204ENST00000460366 TESK2Q96S53 571 aa13.96□□□□□ -0.17
VPS45-204ENST00000460366 BRINP3Q76B58 766 aa13.95□□□□□ -0.18
VPS45-204ENST00000460366 PLCD3Q8N3E9 789 aa13.95□□□□□ -0.18
VPS45-204ENST00000460366 GABBR2O75899 941 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms