RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 SHPRHQ149N8 1683 aa34.58■■■■□ 3.13
HOXB3-202ENST00000460160 ADGRB1O14514 1584 aa34.56■■■■□ 3.12
HOXB3-202ENST00000460160 STAC3Q96MF2 364 aa34.55■■■■□ 3.12
HOXB3-202ENST00000460160 SIRT1Q96EB6 747 aa34.55■■■■□ 3.12
HOXB3-202ENST00000460160 DDX17Q92841 729 aaKnown RBP34.54■■■■□ 3.12
HOXB3-202ENST00000460160 ORAI2Q96SN7 254 aa34.53■■■■□ 3.12
HOXB3-202ENST00000460160 RGS17Q9UGC6 210 aaPredicted RBP34.51■■■■□ 3.12
HOXB3-202ENST00000460160 DLC1Q96QB1 1528 aa34.49■■■■□ 3.11
HOXB3-202ENST00000460160 SPATA31A6Q5VVP1 1343 aa34.48■■■■□ 3.11
HOXB3-202ENST00000460160 LRP6O75581 1613 aa34.47■■■■□ 3.11
HOXB3-202ENST00000460160 FMN2Q9NZ56 1722 aa34.47■■■■□ 3.11
HOXB3-202ENST00000460160 SOCS7O14512 581 aa34.45■■■■□ 3.11
HOXB3-202ENST00000460160 PRAM1Q96QH2 718 aa34.45■■■■□ 3.1
HOXB3-202ENST00000460160 LRRC59Q96AG4 307 aaKnown RBP34.44■■■■□ 3.1
HOXB3-202ENST00000460160 ESCO1Q5FWF5 840 aa34.41■■■■□ 3.1
HOXB3-202ENST00000460160 NUTM2FA1L443 756 aa34.4■■■■□ 3.1
HOXB3-202ENST00000460160 SOS2Q07890 1332 aaPredicted RBP34.4■■■■□ 3.1
HOXB3-202ENST00000460160 SAFB2Q14151 953 aaKnown RBP eCLIP34.4■■■■□ 3.1
HOXB3-202ENST00000460160 TRAK1Q9UPV9 953 aa34.4■■■■□ 3.1
HOXB3-202ENST00000460160 PNPLA6Q8IY17 1366 aa34.38■■■■□ 3.09
HOXB3-202ENST00000460160 POGKQ9P215 609 aa34.37■■■■□ 3.09
HOXB3-202ENST00000460160 KIAA1210Q9ULL0 1709 aa34.36■■■■□ 3.09
HOXB3-202ENST00000460160 RGPD8O14715 1765 aaPredicted RBP34.36■■■■□ 3.09
HOXB3-202ENST00000460160 ADGRB2O60241 1585 aa34.34■■■■□ 3.09
HOXB3-202ENST00000460160 NPHP3Q7Z494 1330 aa34.33■■■■□ 3.09
HOXB3-202ENST00000460160 ARHGEF28Q8N1W1 1705 aaKnown RBP34.32■■■■□ 3.08
HOXB3-202ENST00000460160 PXDNQ92626 1479 aa34.32■■■■□ 3.08
HOXB3-202ENST00000460160 NUTM2BA6NNL0 878 aaPredicted RBP34.32■■■■□ 3.08
HOXB3-202ENST00000460160 NUTM2EB1AL46 878 aaPredicted RBP34.32■■■■□ 3.08
HOXB3-202ENST00000460160 POTEAQ6S8J7 498 aa34.32■■■■□ 3.08
HOXB3-202ENST00000460160 NUTM2AQ8IVF1 878 aaPredicted RBP34.32■■■■□ 3.08
HOXB3-202ENST00000460160 TRIM26Q12899 539 aaPredicted RBP34.31■■■■□ 3.08
HOXB3-202ENST00000460160 MEX3CQ5U5Q3 659 aaKnown RBP34.31■■■■□ 3.08
HOXB3-202ENST00000460160 SIN3AQ96ST3 1273 aa34.31■■■■□ 3.08
HOXB3-202ENST00000460160 FOXO3O43524 673 aa34.3■■■■□ 3.08
HOXB3-202ENST00000460160 KIF1AQ12756 1690 aa34.3■■■■□ 3.08
HOXB3-202ENST00000460160 USP32Q8NFA0 1604 aa34.26■■■■□ 3.07
HOXB3-202ENST00000460160 L3MBTL2Q969R5 705 aa34.25■■■■□ 3.07
HOXB3-202ENST00000460160 XPCQ01831 940 aaPredicted RBP34.25■■■■□ 3.07
HOXB3-202ENST00000460160 HIRIP3Q9BW71 556 aaPredicted RBP34.25■■■■□ 3.07
HOXB3-202ENST00000460160 MINK1Q8N4C8 1332 aaPredicted RBP34.24■■■■□ 3.07
HOXB3-202ENST00000460160 COL22A1Q8NFW1 1626 aaPredicted RBP34.23■■■■□ 3.07
HOXB3-202ENST00000460160 ANKARQ7Z5J8 1434 aa34.22■■■■□ 3.07
HOXB3-202ENST00000460160 NBPF1Q3BBV0 1214 aa34.22■■■■□ 3.07
HOXB3-202ENST00000460160 NEUROD1Q13562 356 aa34.2■■■■□ 3.07
HOXB3-202ENST00000460160 PHF8Q9UPP1 1060 aa34.2■■■■□ 3.07
HOXB3-202ENST00000460160 TULP4Q9NRJ4 1543 aa34.15■■■■□ 3.06
HOXB3-202ENST00000460160 WASLO00401 505 aaPredicted RBP34.15■■■■□ 3.06
HOXB3-202ENST00000460160 ZNF772Q68DY9 489 aaPredicted RBP34.15■■■■□ 3.06
HOXB3-202ENST00000460160 EIF3AQ14152 1382 aaKnown RBP34.13■■■■□ 3.05
HOXB3-202ENST00000460160 AFF2P51816 1311 aa34.13■■■■□ 3.05
HOXB3-202ENST00000460160 PRR36Q9H6K5 1346 aa34.13■■■■□ 3.05
HOXB3-202ENST00000460160 KRT28Q7Z3Y7 464 aa34.12■■■■□ 3.05
HOXB3-202ENST00000460160 C8orf37Q96NL8 207 aa34.12■■■■□ 3.05
HOXB3-202ENST00000460160 ADAMTS2O95450 1211 aa34.11■■■■□ 3.05
HOXB3-202ENST00000460160 TRPM1Q7Z4N2 1603 aa34.1■■■■□ 3.05
HOXB3-202ENST00000460160 SPATA31A3Q5VYP0 1347 aa34.1■■■■□ 3.05
HOXB3-202ENST00000460160 PMFBP1Q8TBY8 1022 aa34.09■■■■□ 3.05
HOXB3-202ENST00000460160 TNS3Q68CZ2 1445 aa34.05■■■■□ 3.04
HOXB3-202ENST00000460160 ATP7BP35670 1465 aa34.05■■■■□ 3.04
HOXB3-202ENST00000460160 PSME1Q06323 249 aa34.04■■■■□ 3.04
HOXB3-202ENST00000460160 MARF1Q9Y4F3 1742 aaKnown RBP34.04■■■■□ 3.04
HOXB3-202ENST00000460160 ITSN1Q15811 1721 aa34.04■■■■□ 3.04
HOXB3-202ENST00000460160 NGLY1Q96IV0 654 aa34.03■■■■□ 3.04
HOXB3-202ENST00000460160 SBNO1A3KN83 1393 aa34.03■■■■□ 3.04
HOXB3-202ENST00000460160 TRPM3Q9HCF6 1732 aaPredicted RBP34.01■■■■□ 3.03
HOXB3-202ENST00000460160 CDK19Q9BWU1 502 aa34■■■■□ 3.03
HOXB3-202ENST00000460160 CENPJQ9HC77 1338 aaPredicted RBP34■■■■□ 3.03
HOXB3-202ENST00000460160 QRICH2Q9H0J4 1663 aa33.99■■■■□ 3.03
HOXB3-202ENST00000460160 NUDT16Q96DE0 195 aaKnown RBP33.99■■■■□ 3.03
HOXB3-202ENST00000460160 TOPAZ1Q8N9V7 1692 aa33.97■■■■□ 3.03
HOXB3-202ENST00000460160 NBPF8Q3BBV2 869 aa33.96■■■■□ 3.03
HOXB3-202ENST00000460160 ROCK2O75116 1388 aaKnown RBP33.96■■■■□ 3.03
HOXB3-202ENST00000460160 RXRBP28702 533 aa33.95■■■■□ 3.03
HOXB3-202ENST00000460160 GPRASP1Q5JY77 1395 aa33.95■■■■□ 3.03
HOXB3-202ENST00000460160 FNBP4Q8N3X1 1017 aaPredicted RBP33.94■■■■□ 3.02
HOXB3-202ENST00000460160 ARHGEF10O15013 1369 aa33.94■■■■□ 3.02
HOXB3-202ENST00000460160 ABCA3Q99758 1704 aa33.93■■■■□ 3.02
HOXB3-202ENST00000460160 NGDNQ8NEJ9 315 aaKnown RBP33.93■■■■□ 3.02
HOXB3-202ENST00000460160 QTRT2Q9H974 415 aaKnown RBP33.93■■■■□ 3.02
HOXB3-202ENST00000460160 ALS2Q96Q42 1657 aa33.93■■■■□ 3.02
HOXB3-202ENST00000460160 TONSLQ96HA7 1378 aa33.92■■■■□ 3.02
HOXB3-202ENST00000460160 LMOD2Q6P5Q4 547 aa33.91■■■■□ 3.02
HOXB3-202ENST00000460160 USP21Q9UK80 565 aa33.9■■■■□ 3.02
HOXB3-202ENST00000460160 CDK12Q9NYV4 1490 aaPredicted RBP33.89■■■■□ 3.02
HOXB3-202ENST00000460160 CABLES1Q8TDN4 633 aa33.89■■■■□ 3.02
HOXB3-202ENST00000460160 CCDC61Q9Y6R9 512 aa33.87■■■■□ 3.01
HOXB3-202ENST00000460160 BCL9LQ86UU0 1499 aa33.87■■■■□ 3.01
HOXB3-202ENST00000460160 RBM6P78332 1123 aaKnown RBP33.86■■■■□ 3.01
HOXB3-202ENST00000460160 POLR3AO14802 1390 aaPredicted RBP33.86■■■■□ 3.01
HOXB3-202ENST00000460160 PLEKHG5O94827 1062 aa33.84■■■■□ 3.01
HOXB3-202ENST00000460160 SRPK2P78362 688 aaKnown RBP33.84■■■■□ 3.01
HOXB3-202ENST00000460160 ATRNO75882 1429 aa33.83■■■■□ 3.01
HOXB3-202ENST00000460160 PLEKHG3A1L390 1219 aa33.83■■■■□ 3.01
HOXB3-202ENST00000460160 HAP1P54257 671 aaPredicted RBP33.83■■■■□ 3.01
HOXB3-202ENST00000460160 CABP2Q9NPB3 220 aa33.83■■■■□ 3.01
HOXB3-202ENST00000460160 TRPC5Q9UL62 973 aaPredicted RBP33.83■■■■□ 3.01
HOXB3-202ENST00000460160 RALGAPBQ86X10 1494 aa33.82■■■■□ 3
HOXB3-202ENST00000460160 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.81■■■■□ 3
HOXB3-202ENST00000460160 ACEP12821 1306 aa33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms