RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 SMYD5Q6GMV2 418 aa9.33□□□□□ -0.92
UBDP1-202ENST00000457888 GPR37O15354 613 aa9.32□□□□□ -0.92
UBDP1-202ENST00000457888 SMPD1P17405 629 aa9.32□□□□□ -0.92
UBDP1-202ENST00000457888 RNF19BQ6ZMZ0 732 aa9.32□□□□□ -0.92
UBDP1-202ENST00000457888 SNIP1Q8TAD8 396 aaKnown RBP9.32□□□□□ -0.92
UBDP1-202ENST00000457888 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
UBDP1-202ENST00000457888 WIPF1O43516 503 aa9.3□□□□□ -0.92
UBDP1-202ENST00000457888 TRIM32Q13049 653 aa9.3□□□□□ -0.92
UBDP1-202ENST00000457888 PHOX2BQ99453 314 aa9.3□□□□□ -0.92
UBDP1-202ENST00000457888 ATP13A2Q9NQ11 1180 aa9.3□□□□□ -0.92
UBDP1-202ENST00000457888 STK17AQ9UEE5 414 aa9.3□□□□□ -0.92
UBDP1-202ENST00000457888 Q3C1V9 767 aa9.29□□□□□ -0.92
UBDP1-202ENST00000457888 INSM1Q01101 510 aaPredicted RBP9.28□□□□□ -0.92
UBDP1-202ENST00000457888 MRGPRX2Q96LB1 330 aa9.28□□□□□ -0.92
UBDP1-202ENST00000457888 SNRPBP14678 240 aaKnown RBP9.27□□□□□ -0.93
UBDP1-202ENST00000457888 MMP16P51512 607 aa9.27□□□□□ -0.93
UBDP1-202ENST00000457888 J3QL48 77 aa9.26□□□□□ -0.93
UBDP1-202ENST00000457888 TRIM47Q96LD4 638 aa9.26□□□□□ -0.93
UBDP1-202ENST00000457888 SENP2Q9HC62 589 aa9.26□□□□□ -0.93
UBDP1-202ENST00000457888 TERTO14746 1132 aaKnown RBP9.24□□□□□ -0.93
UBDP1-202ENST00000457888 REPIN1Q9BWE0 567 aaKnown RBP9.24□□□□□ -0.93
UBDP1-202ENST00000457888 DXOO77932 396 aaKnown RBP9.23□□□□□ -0.93
UBDP1-202ENST00000457888 HPS1Q92902 700 aa9.23□□□□□ -0.93
UBDP1-202ENST00000457888 USB1Q9BQ65 265 aaKnown RBP9.23□□□□□ -0.93
UBDP1-202ENST00000457888 LCE2CQ5TA81 110 aa9.22□□□□□ -0.93
UBDP1-202ENST00000457888 CD46P15529 392 aa9.21□□□□□ -0.94
UBDP1-202ENST00000457888 KIFC2Q96AC6 838 aa9.21□□□□□ -0.94
UBDP1-202ENST00000457888 KDM4AO75164 1064 aa9.2□□□□□ -0.94
UBDP1-202ENST00000457888 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
UBDP1-202ENST00000457888 GPIHBP1Q8IV16 184 aa9.2□□□□□ -0.94
UBDP1-202ENST00000457888 CCDC24Q8N4L8 307 aa9.2□□□□□ -0.94
UBDP1-202ENST00000457888 WNT7BP56706 349 aa9.18□□□□□ -0.94
UBDP1-202ENST00000457888 SKOR1P84550 965 aa9.17□□□□□ -0.94
UBDP1-202ENST00000457888 USP46P62068 366 aa9.16□□□□□ -0.94
UBDP1-202ENST00000457888 HLA-CQ95604 372 aa9.15□□□□□ -0.94
UBDP1-202ENST00000457888 ALDH1A1P00352 501 aa9.14□□□□□ -0.95
UBDP1-202ENST00000457888 SLC16A10Q8TF71 515 aa9.13□□□□□ -0.95
UBDP1-202ENST00000457888 HOXA2O43364 376 aa9.12□□□□□ -0.95
UBDP1-202ENST00000457888 JUNDP17535 347 aa9.12□□□□□ -0.95
UBDP1-202ENST00000457888 MAP2K5Q13163 448 aa9.12□□□□□ -0.95
UBDP1-202ENST00000457888 MDM2Q00987 491 aaPredicted RBP9.11□□□□□ -0.95
UBDP1-202ENST00000457888 NISCHQ9Y2I1 1504 aa9.1□□□□□ -0.95
UBDP1-202ENST00000457888 NXF1Q9UBU9 619 aaKnown RBP9.1□□□□□ -0.95
UBDP1-202ENST00000457888 FAM181BA6NEQ2 426 aa9.09□□□□□ -0.95
UBDP1-202ENST00000457888 SIAH2O43255 324 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 BMP1P13497 986 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 GUCA2AQ02747 115 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 TRIM46Q7Z4K8 759 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 EHBP1Q8NDI1 1231 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 NUDT12Q9BQG2 462 aa9.08□□□□□ -0.96
UBDP1-202ENST00000457888 IRF6O14896 467 aa9.07□□□□□ -0.96
UBDP1-202ENST00000457888 CAPN5O15484 640 aaPredicted RBP9.07□□□□□ -0.96
UBDP1-202ENST00000457888 GMPRP36959 345 aa9.07□□□□□ -0.96
UBDP1-202ENST00000457888 NPAS3Q8IXF0 933 aa9.07□□□□□ -0.96
UBDP1-202ENST00000457888 SYMPKQ92797 1274 aaKnown RBP9.07□□□□□ -0.96
UBDP1-202ENST00000457888 WASF2Q9Y6W5 498 aa9.07□□□□□ -0.96
UBDP1-202ENST00000457888 PTCRAQ6ISU1 281 aaPredicted RBP9.06□□□□□ -0.96
UBDP1-202ENST00000457888 IRF7Q92985 503 aa9.06□□□□□ -0.96
UBDP1-202ENST00000457888 RETREG3Q86VR2 466 aa9.05□□□□□ -0.96
UBDP1-202ENST00000457888 ZSCAN1Q8NBB4 408 aa9.04□□□□□ -0.96
UBDP1-202ENST00000457888 MINK1Q8N4C8 1332 aaPredicted RBP9.04□□□□□ -0.96
UBDP1-202ENST00000457888 NUTM1Q86Y26 1132 aa9.03□□□□□ -0.96
UBDP1-202ENST00000457888 H3BM21 787 aa9.02□□□□□ -0.97
UBDP1-202ENST00000457888 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.97
UBDP1-202ENST00000457888 VEGFBP49765 207 aa9.02□□□□□ -0.97
UBDP1-202ENST00000457888 GPCPD1Q9NPB8 672 aa9.02□□□□□ -0.97
UBDP1-202ENST00000457888 CLCN1P35523 988 aa9.01□□□□□ -0.97
UBDP1-202ENST00000457888 SH3BP2P78314 561 aa9.01□□□□□ -0.97
UBDP1-202ENST00000457888 PLCB2Q00722 1185 aa9.01□□□□□ -0.97
UBDP1-202ENST00000457888 FAM217BQ9NTX9 383 aaPredicted RBP9.01□□□□□ -0.97
UBDP1-202ENST00000457888 CCNYL3P0C7X3 344 aa9□□□□□ -0.97
UBDP1-202ENST00000457888 CCDC102AQ96A19 550 aa9□□□□□ -0.97
UBDP1-202ENST00000457888 C6orf229H3BNL8 230 aa8.99□□□□□ -0.97
UBDP1-202ENST00000457888 FDX1P10109 184 aa8.99□□□□□ -0.97
UBDP1-202ENST00000457888 MS4A1P11836 297 aa8.99□□□□□ -0.97
UBDP1-202ENST00000457888 ERBB4Q15303 1308 aa8.99□□□□□ -0.97
UBDP1-202ENST00000457888 ZFP42Q96MM3 310 aa8.98□□□□□ -0.97
UBDP1-202ENST00000457888 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
UBDP1-202ENST00000457888 TULP1O00294 542 aaPredicted RBP8.97□□□□□ -0.97
UBDP1-202ENST00000457888 PTPRNQ16849 979 aa8.97□□□□□ -0.97
UBDP1-202ENST00000457888 UNC93B1Q9H1C4 597 aa8.97□□□□□ -0.97
UBDP1-202ENST00000457888 TLL2Q9Y6L7 1015 aa8.97□□□□□ -0.97
UBDP1-202ENST00000457888 LINC01559Q495D7 138 aa8.96□□□□□ -0.98
UBDP1-202ENST00000457888 KRI1Q8N9T8 703 aaKnown RBP8.96□□□□□ -0.98
UBDP1-202ENST00000457888 EVA1BQ9NVM1 165 aa8.96□□□□□ -0.98
UBDP1-202ENST00000457888 SLC24A1O60721 1099 aa8.95□□□□□ -0.98
UBDP1-202ENST00000457888 BAP1Q92560 729 aa8.95□□□□□ -0.98
UBDP1-202ENST00000457888 PLEKHG3A1L390 1219 aa8.94□□□□□ -0.98
UBDP1-202ENST00000457888 VARSP26640 1264 aaKnown RBP8.94□□□□□ -0.98
UBDP1-202ENST00000457888 NNTQ13423 1086 aa8.94□□□□□ -0.98
UBDP1-202ENST00000457888 KCNH2Q12809 1159 aa8.93□□□□□ -0.98
UBDP1-202ENST00000457888 SCARF1Q14162 830 aa8.93□□□□□ -0.98
UBDP1-202ENST00000457888 MRPL14Q6P1L8 145 aaKnown RBP8.93□□□□□ -0.98
UBDP1-202ENST00000457888 MPNDQ8N594 471 aa8.93□□□□□ -0.98
UBDP1-202ENST00000457888 ZNF511Q8NB15 262 aa8.93□□□□□ -0.98
UBDP1-202ENST00000457888 SPIRE2Q8WWL2 714 aa8.91□□□□□ -0.98
UBDP1-202ENST00000457888 PURBQ96QR8 312 aaKnown RBP8.91□□□□□ -0.98
UBDP1-202ENST00000457888 ADH1CP00326 375 aa8.9□□□□□ -0.98
UBDP1-202ENST00000457888 TIMP2P16035 220 aa8.9□□□□□ -0.98
UBDP1-202ENST00000457888 NDUFV2P19404 249 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 1362.9 ms