RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 CDC42BPGQ6DT37 1551 aa16.7■□□□□ 0.26
TRAPPC12-212ENST00000457845 MSH6P52701 1360 aa16.69■□□□□ 0.26
TRAPPC12-212ENST00000457845 POGKQ9P215 609 aa16.69■□□□□ 0.26
TRAPPC12-212ENST00000457845 FMN2Q9NZ56 1722 aa16.68■□□□□ 0.26
TRAPPC12-212ENST00000457845 EIF3AQ14152 1382 aaKnown RBP16.68■□□□□ 0.26
TRAPPC12-212ENST00000457845 CENPJQ9HC77 1338 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC12-212ENST00000457845 SBNO2Q9Y2G9 1366 aa16.66■□□□□ 0.26
TRAPPC12-212ENST00000457845 ZEB1P37275 1124 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC12-212ENST00000457845 RGPD8O14715 1765 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC12-212ENST00000457845 USP47Q96K76 1375 aa16.65■□□□□ 0.26
TRAPPC12-212ENST00000457845 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
TRAPPC12-212ENST00000457845 SAFB2Q14151 953 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRAPPC12-212ENST00000457845 CADPS2Q86UW7 1296 aa16.64■□□□□ 0.25
TRAPPC12-212ENST00000457845 MST1RQ04912 1400 aa16.62■□□□□ 0.25
TRAPPC12-212ENST00000457845 MINK1Q8N4C8 1332 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC12-212ENST00000457845 USP32Q8NFA0 1604 aa16.62■□□□□ 0.25
TRAPPC12-212ENST00000457845 TULP4Q9NRJ4 1543 aa16.61■□□□□ 0.25
TRAPPC12-212ENST00000457845 ST20-MTHFSA0A0A6YYL1 179 aa16.61■□□□□ 0.25
TRAPPC12-212ENST00000457845 TOM1O60784 492 aa16.61■□□□□ 0.25
TRAPPC12-212ENST00000457845 ATF3P18847 181 aa16.61■□□□□ 0.25
TRAPPC12-212ENST00000457845 TESK2Q96S53 571 aa16.61■□□□□ 0.25
TRAPPC12-212ENST00000457845 WASLO00401 505 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC12-212ENST00000457845 EIF4G2P78344 907 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRAPPC12-212ENST00000457845 HIRIP3Q9BW71 556 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC12-212ENST00000457845 SLAIN2Q9P270 581 aa16.59■□□□□ 0.25
TRAPPC12-212ENST00000457845 ITSN1Q15811 1721 aa16.59■□□□□ 0.25
TRAPPC12-212ENST00000457845 UBAP1LF5GYI3 381 aa16.58■□□□□ 0.24
TRAPPC12-212ENST00000457845 SLC24A1O60721 1099 aa16.58■□□□□ 0.24
TRAPPC12-212ENST00000457845 ANKARQ7Z5J8 1434 aa16.58■□□□□ 0.24
TRAPPC12-212ENST00000457845 C1orf167Q5SNV9 1468 aa16.58■□□□□ 0.24
TRAPPC12-212ENST00000457845 TOPAZ1Q8N9V7 1692 aa16.57■□□□□ 0.24
TRAPPC12-212ENST00000457845 ROBO1Q9Y6N7 1651 aa16.57■□□□□ 0.24
TRAPPC12-212ENST00000457845 EVC2Q86UK5 1308 aa16.56■□□□□ 0.24
TRAPPC12-212ENST00000457845 HSPA5P11021 654 aaKnown RBP16.56■□□□□ 0.24
TRAPPC12-212ENST00000457845 CDK19Q9BWU1 502 aa16.56■□□□□ 0.24
TRAPPC12-212ENST00000457845 ATP7BP35670 1465 aa16.55■□□□□ 0.24
TRAPPC12-212ENST00000457845 PRR36Q9H6K5 1346 aa16.54■□□□□ 0.24
TRAPPC12-212ENST00000457845 KIF1AQ12756 1690 aa16.54■□□□□ 0.24
TRAPPC12-212ENST00000457845 PUS7Q96PZ0 661 aaKnown RBP16.54■□□□□ 0.24
TRAPPC12-212ENST00000457845 NHSL1Q5SYE7 1610 aa16.54■□□□□ 0.24
TRAPPC12-212ENST00000457845 FBXO41Q8TF61 875 aa16.53■□□□□ 0.24
TRAPPC12-212ENST00000457845 NUTM2FA1L443 756 aa16.51■□□□□ 0.23
TRAPPC12-212ENST00000457845 BRINP3Q76B58 766 aa16.51■□□□□ 0.23
TRAPPC12-212ENST00000457845 NUDT16Q96DE0 195 aaKnown RBP16.51■□□□□ 0.23
TRAPPC12-212ENST00000457845 ORAI2Q96SN7 254 aa16.51■□□□□ 0.23
TRAPPC12-212ENST00000457845 DISP3Q9P2K9 1392 aa16.51■□□□□ 0.23
TRAPPC12-212ENST00000457845 AHDC1Q5TGY3 1603 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC12-212ENST00000457845 TMF1P82094 1093 aa16.5■□□□□ 0.23
TRAPPC12-212ENST00000457845 CABP2Q9NPB3 220 aa16.5■□□□□ 0.23
TRAPPC12-212ENST00000457845 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
TRAPPC12-212ENST00000457845 CCDC61Q9Y6R9 512 aa16.49■□□□□ 0.23
TRAPPC12-212ENST00000457845 PIP4K2BP78356 416 aa16.48■□□□□ 0.23
TRAPPC12-212ENST00000457845 ESCO1Q5FWF5 840 aa16.48■□□□□ 0.23
TRAPPC12-212ENST00000457845 AKAP12Q02952 1782 aa16.48■□□□□ 0.23
TRAPPC12-212ENST00000457845 ATAD2Q6PL18 1390 aa16.48■□□□□ 0.23
TRAPPC12-212ENST00000457845 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
TRAPPC12-212ENST00000457845 PHF8Q9UPP1 1060 aa16.47■□□□□ 0.23
TRAPPC12-212ENST00000457845 PHLPP1O60346 1717 aa16.47■□□□□ 0.23
TRAPPC12-212ENST00000457845 MYOM1P52179 1685 aa16.46■□□□□ 0.23
TRAPPC12-212ENST00000457845 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
TRAPPC12-212ENST00000457845 PPIP5K1Q6PFW1 1433 aa16.45■□□□□ 0.22
TRAPPC12-212ENST00000457845 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC12-212ENST00000457845 COL16A1Q07092 1604 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC12-212ENST00000457845 C11orf95C9JLR9 678 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC12-212ENST00000457845 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
TRAPPC12-212ENST00000457845 TRPM3Q9HCF6 1732 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC12-212ENST00000457845 SOS2Q07890 1332 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC12-212ENST00000457845 PXDNQ92626 1479 aa16.42■□□□□ 0.22
TRAPPC12-212ENST00000457845 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
TRAPPC12-212ENST00000457845 NINLQ9Y2I6 1382 aa16.42■□□□□ 0.22
TRAPPC12-212ENST00000457845 PMFBP1Q8TBY8 1022 aa16.42■□□□□ 0.22
TRAPPC12-212ENST00000457845 CABP1Q9NZU7 370 aa16.42■□□□□ 0.22
TRAPPC12-212ENST00000457845 NPHP3Q7Z494 1330 aa16.42■□□□□ 0.22
TRAPPC12-212ENST00000457845 CD163L1Q9NR16 1453 aa16.42■□□□□ 0.22
TRAPPC12-212ENST00000457845 FOXO3O43524 673 aa16.41■□□□□ 0.22
TRAPPC12-212ENST00000457845 CPSF1Q10570 1443 aaKnown RBP16.41■□□□□ 0.22
TRAPPC12-212ENST00000457845 ACEP12821 1306 aa16.41■□□□□ 0.22
TRAPPC12-212ENST00000457845 NGDNQ8NEJ9 315 aaKnown RBP16.39■□□□□ 0.21
TRAPPC12-212ENST00000457845 DDX17Q92841 729 aaKnown RBP16.39■□□□□ 0.21
TRAPPC12-212ENST00000457845 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
TRAPPC12-212ENST00000457845 ALS2Q96Q42 1657 aa16.39■□□□□ 0.21
TRAPPC12-212ENST00000457845 NRKQ7Z2Y5 1582 aa16.38■□□□□ 0.21
TRAPPC12-212ENST00000457845 HSPA1LP34931 641 aa16.38■□□□□ 0.21
TRAPPC12-212ENST00000457845 KIF7Q2M1P5 1343 aa16.38■□□□□ 0.21
TRAPPC12-212ENST00000457845 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC12-212ENST00000457845 KRT28Q7Z3Y7 464 aa16.37■□□□□ 0.21
TRAPPC12-212ENST00000457845 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC12-212ENST00000457845 SBNO1A3KN83 1393 aa16.37■□□□□ 0.21
TRAPPC12-212ENST00000457845 SHPRHQ149N8 1683 aa16.37■□□□□ 0.21
TRAPPC12-212ENST00000457845 SSH2Q76I76 1423 aa16.36■□□□□ 0.21
TRAPPC12-212ENST00000457845 PSME1Q06323 249 aa16.36■□□□□ 0.21
TRAPPC12-212ENST00000457845 WASHC2AQ641Q2 1341 aa16.36■□□□□ 0.21
TRAPPC12-212ENST00000457845 CCDC7Q96M83 1385 aa16.36■□□□□ 0.21
TRAPPC12-212ENST00000457845 USP6P35125 1406 aa16.36■□□□□ 0.21
TRAPPC12-212ENST00000457845 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
TRAPPC12-212ENST00000457845 LRRC59Q96AG4 307 aaKnown RBP16.35■□□□□ 0.21
TRAPPC12-212ENST00000457845 ANKRD36BQ8N2N9 1353 aa16.35■□□□□ 0.21
TRAPPC12-212ENST00000457845 COL22A1Q8NFW1 1626 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC12-212ENST00000457845 ILDR1Q86SU0 546 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC12-212ENST00000457845 TERF2IPQ9NYB0 399 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms