RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 DUOX2Q9NRD8 1548 aa20.51■□□□□ 0.87
LSS-205ENST00000457828 NLRP2Q9NX02 1062 aa20.5■□□□□ 0.87
LSS-205ENST00000457828 NOS1P29475 1434 aa20.49■□□□□ 0.87
LSS-205ENST00000457828 CCDC61Q9Y6R9 512 aa20.48■□□□□ 0.87
LSS-205ENST00000457828 FOXD4L1Q9NU39 408 aa20.48■□□□□ 0.87
LSS-205ENST00000457828 ZMYM3Q14202 1370 aa20.47■□□□□ 0.87
LSS-205ENST00000457828 NUDT16Q96DE0 195 aaKnown RBP20.47■□□□□ 0.87
LSS-205ENST00000457828 C1orf141Q5JVX7 400 aa20.47■□□□□ 0.87
LSS-205ENST00000457828 NUTM2BA6NNL0 878 aaPredicted RBP20.46■□□□□ 0.87
LSS-205ENST00000457828 NUTM2EB1AL46 878 aaPredicted RBP20.46■□□□□ 0.87
LSS-205ENST00000457828 NUTM2AQ8IVF1 878 aaPredicted RBP20.46■□□□□ 0.87
LSS-205ENST00000457828 LMOD3Q0VAK6 560 aa20.46■□□□□ 0.87
LSS-205ENST00000457828 MTHFSP49914 203 aa20.46■□□□□ 0.87
LSS-205ENST00000457828 UHRF1BP1LA0JNW5 1464 aa20.46■□□□□ 0.87
LSS-205ENST00000457828 HMOX1P09601 288 aa20.45■□□□□ 0.86
LSS-205ENST00000457828 ZNF692Q9BU19 519 aaPredicted RBP20.45■□□□□ 0.86
LSS-205ENST00000457828 DMRT2Q9Y5R5 561 aa20.45■□□□□ 0.86
LSS-205ENST00000457828 ELL2O00472 640 aaPredicted RBP20.44■□□□□ 0.86
LSS-205ENST00000457828 TEFQ10587 303 aa20.44■□□□□ 0.86
LSS-205ENST00000457828 TCOF1Q13428 1488 aaKnown RBP20.44■□□□□ 0.86
LSS-205ENST00000457828 ABCA8O94911 1581 aa20.44■□□□□ 0.86
LSS-205ENST00000457828 TPRNQ4KMQ1 711 aa20.43■□□□□ 0.86
LSS-205ENST00000457828 RAPGEF4Q8WZA2 1011 aa20.43■□□□□ 0.86
LSS-205ENST00000457828 SYTL4Q96C24 671 aaPredicted RBP20.43■□□□□ 0.86
LSS-205ENST00000457828 FOXO3O43524 673 aa20.42■□□□□ 0.86
LSS-205ENST00000457828 STK31Q9BXU1 1019 aa20.42■□□□□ 0.86
LSS-205ENST00000457828 ATP10AO60312 1499 aa20.42■□□□□ 0.86
LSS-205ENST00000457828 RNF123Q5XPI4 1314 aa20.42■□□□□ 0.86
LSS-205ENST00000457828 STRN4Q9NRL3 753 aa20.41■□□□□ 0.86
LSS-205ENST00000457828 C14orf93Q9H972 538 aaKnown RBP20.41■□□□□ 0.86
LSS-205ENST00000457828 MAGI3Q5TCQ9 1506 aa20.41■□□□□ 0.86
LSS-205ENST00000457828 OS9Q13438 667 aaPredicted RBP20.41■□□□□ 0.86
LSS-205ENST00000457828 NEO1Q92859 1461 aa20.4■□□□□ 0.86
LSS-205ENST00000457828 RSPH6AQ9H0K4 717 aa20.4■□□□□ 0.86
LSS-205ENST00000457828 DUSP27Q5VZP5 1158 aa20.39■□□□□ 0.85
LSS-205ENST00000457828 APBB1O00213 710 aa20.39■□□□□ 0.85
LSS-205ENST00000457828 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.85
LSS-205ENST00000457828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.38■□□□□ 0.857e-7■■□□□ 13.6
LSS-205ENST00000457828 SLFN5Q08AF3 891 aa20.38■□□□□ 0.85
LSS-205ENST00000457828 IPO8O15397 1037 aaKnown RBP20.38■□□□□ 0.85
LSS-205ENST00000457828 ATAD2Q6PL18 1390 aa20.38■□□□□ 0.85
LSS-205ENST00000457828 FAM135AQ9P2D6 1515 aa20.37■□□□□ 0.85
LSS-205ENST00000457828 GBP4Q96PP9 640 aa20.37■□□□□ 0.85
LSS-205ENST00000457828 CHMP4BQ9H444 224 aaKnown RBP20.37■□□□□ 0.85
LSS-205ENST00000457828 PRKCSHP14314 528 aaPredicted RBP20.37■□□□□ 0.85
LSS-205ENST00000457828 PRDM11Q9NQV5 511 aa20.37■□□□□ 0.85
LSS-205ENST00000457828 YEATS2Q9ULM3 1422 aa20.36■□□□□ 0.85
LSS-205ENST00000457828 ZC3H6P61129 1189 aaKnown RBP20.36■□□□□ 0.85
LSS-205ENST00000457828 DISP3Q9P2K9 1392 aa20.36■□□□□ 0.85
LSS-205ENST00000457828 TCP11L2Q8N4U5 519 aa20.36■□□□□ 0.85
LSS-205ENST00000457828 SPATA31E1Q6ZUB1 1445 aa20.35■□□□□ 0.85
LSS-205ENST00000457828 CHMP4AQ9BY43 222 aa20.35■□□□□ 0.85
LSS-205ENST00000457828 RIPK4P57078 832 aa20.35■□□□□ 0.85
LSS-205ENST00000457828 PDZRN3Q9UPQ7 1066 aa20.35■□□□□ 0.85
LSS-205ENST00000457828 ATP7AQ04656 1500 aa20.35■□□□□ 0.85
LSS-205ENST00000457828 NCKAP5LQ9HCH0 1330 aa20.34■□□□□ 0.85
LSS-205ENST00000457828 SHANK2Q9UPX8 1470 aa20.34■□□□□ 0.85
LSS-205ENST00000457828 WASLO00401 505 aaPredicted RBP20.34■□□□□ 0.85
LSS-205ENST00000457828 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
LSS-205ENST00000457828 PHF8Q9UPP1 1060 aa20.34■□□□□ 0.85
LSS-205ENST00000457828 DZIP1LQ8IYY4 767 aaKnown RBP20.33■□□□□ 0.85
LSS-205ENST00000457828 KDM6BO15054 1643 aa20.33■□□□□ 0.84
LSS-205ENST00000457828 PDE3AQ14432 1141 aa20.33■□□□□ 0.84
LSS-205ENST00000457828 SLC4A10Q6U841 1118 aa20.32■□□□□ 0.84
LSS-205ENST00000457828 C22orf23Q9BZE7 217 aa20.32■□□□□ 0.84
LSS-205ENST00000457828 PTMAP06454 111 aaKnown RBP20.32■□□□□ 0.84
LSS-205ENST00000457828 RIMS2Q9UQ26 1411 aa20.31■□□□□ 0.84
LSS-205ENST00000457828 RALGAPBQ86X10 1494 aa20.31■□□□□ 0.84
LSS-205ENST00000457828 RRS1Q15050 365 aaKnown RBP20.31■□□□□ 0.84
LSS-205ENST00000457828 TTC5Q8N0Z6 440 aa20.3■□□□□ 0.84
LSS-205ENST00000457828 NGEFQ8N5V2 710 aa20.3■□□□□ 0.84
LSS-205ENST00000457828 CHMP5Q9NZZ3 219 aa20.3■□□□□ 0.84
LSS-205ENST00000457828 LRPPRCP42704 1394 aaKnown RBP20.3■□□□□ 0.84
LSS-205ENST00000457828 PARD3Q8TEW0 1356 aa20.3■□□□□ 0.84
LSS-205ENST00000457828 PZPP20742 1482 aa20.3■□□□□ 0.84
LSS-205ENST00000457828 CASC1Q6TDU7 716 aa20.3■□□□□ 0.84
LSS-205ENST00000457828 CADPS2Q86UW7 1296 aa20.29■□□□□ 0.84
LSS-205ENST00000457828 MSNP26038 577 aaKnown RBP20.28■□□□□ 0.84
LSS-205ENST00000457828 LNPKQ9C0E8 428 aa20.28■□□□□ 0.84
LSS-205ENST00000457828 TOM1L2Q6ZVM7 507 aa20.28■□□□□ 0.84
LSS-205ENST00000457828 PER1O15534 1290 aaPredicted RBP20.28■□□□□ 0.84
LSS-205ENST00000457828 ANKRD45Q5TZF3 282 aa20.28■□□□□ 0.84
LSS-205ENST00000457828 TSPOAP1O95153 1857 aa20.28■□□□□ 0.84
LSS-205ENST00000457828 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
LSS-205ENST00000457828 IGHDP01880 384 aa20.27■□□□□ 0.84
LSS-205ENST00000457828 DDX11L8A8MPP1 907 aa20.27■□□□□ 0.83
LSS-205ENST00000457828 C8orf34Q49A92 452 aa20.26■□□□□ 0.83
LSS-205ENST00000457828 NECTIN2Q92692 538 aa20.26■□□□□ 0.83
LSS-205ENST00000457828 DNTTIP2Q5QJE6 756 aaKnown RBP20.25■□□□□ 0.83
LSS-205ENST00000457828 WWC1Q8IX03 1113 aa20.25■□□□□ 0.83
LSS-205ENST00000457828 GTF2E1P29083 439 aaPredicted RBP20.25■□□□□ 0.83
LSS-205ENST00000457828 SULT6B1Q6IMI4 303 aa20.25■□□□□ 0.83
LSS-205ENST00000457828 TSR2Q969E8 191 aaKnown RBP20.25■□□□□ 0.83
LSS-205ENST00000457828 DNMT1P26358 1616 aaKnown RBP20.24■□□□□ 0.83
LSS-205ENST00000457828 PRKAR2BP31323 418 aa20.24■□□□□ 0.83
LSS-205ENST00000457828 ZCCHC11Q5TAX3 1644 aaKnown RBP20.24■□□□□ 0.83
LSS-205ENST00000457828 NME9Q86XW9 330 aa20.24■□□□□ 0.83
LSS-205ENST00000457828 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
LSS-205ENST00000457828 DDX19BQ9UMR2 479 aa20.24■□□□□ 0.83
LSS-205ENST00000457828 MBD5Q9P267 1494 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms