RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 CCDC73Q6ZRK6 1079 aa6.02□□□□□ -1.45
PCDH9-203ENST00000456367 HFM1A2PYH4 1435 aa6.02□□□□□ -1.45
PCDH9-203ENST00000456367 SCAPERQ9BY12 1400 aa6.02□□□□□ -1.45
PCDH9-203ENST00000456367 NEMFO60524 1076 aa6.02□□□□□ -1.45
PCDH9-203ENST00000456367 IPO7O95373 1038 aaKnown RBP6.02□□□□□ -1.45
PCDH9-203ENST00000456367 RBM25P49756 843 aaKnown RBP6.02□□□□□ -1.45
PCDH9-203ENST00000456367 RUFY1Q96T51 708 aa6.02□□□□□ -1.45
PCDH9-203ENST00000456367 FEZ1Q99689 392 aa6.02□□□□□ -1.45
PCDH9-203ENST00000456367 KLHL40Q2TBA0 621 aa6.02□□□□□ -1.45
PCDH9-203ENST00000456367 BICD2Q8TD16 824 aa6.02□□□□□ -1.45
PCDH9-203ENST00000456367 CHMP7Q8WUX9 453 aaPredicted RBP6.02□□□□□ -1.45
PCDH9-203ENST00000456367 APBB1O00213 710 aa6.01□□□□□ -1.45
PCDH9-203ENST00000456367 CBX1P83916 185 aa6.01□□□□□ -1.45
PCDH9-203ENST00000456367 PAXIP1Q6ZW49 1069 aaPredicted RBP6.01□□□□□ -1.45
PCDH9-203ENST00000456367 TERF2IPQ9NYB0 399 aa6.01□□□□□ -1.45
PCDH9-203ENST00000456367 BCCIPQ9P287 314 aaKnown RBP eCLIP6.01□□□□□ -1.45
PCDH9-203ENST00000456367 SPAG9O60271 1321 aaKnown RBP6.01□□□□□ -1.45
PCDH9-203ENST00000456367 CCDC191Q8NCU4 936 aa6.01□□□□□ -1.45
PCDH9-203ENST00000456367 ANKRD20A12PQ8NF67 263 aa6.01□□□□□ -1.45
PCDH9-203ENST00000456367 AEBP1Q8IUX7 1158 aa6.01□□□□□ -1.45
PCDH9-203ENST00000456367 PLEKHH1Q9ULM0 1364 aa6.01□□□□□ -1.45
PCDH9-203ENST00000456367 IRX3P78415 501 aaPredicted RBP6□□□□□ -1.45
PCDH9-203ENST00000456367 FILIP1Q7Z7B0 1213 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 GBP3Q9H0R5 595 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 PAXBP1Q9Y5B6 917 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 FHOD3Q2V2M9 1422 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 NOL8Q76FK4 1167 aaKnown RBP6□□□□□ -1.45
PCDH9-203ENST00000456367 ZHX1Q9UKY1 873 aaPredicted RBP6□□□□□ -1.45
PCDH9-203ENST00000456367 MAP3K1Q13233 1512 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 PPP4R3BQ5MIZ7 849 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 TMCO3Q6UWJ1 677 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 PANK1Q8TE04 598 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 CDCA7LQ96GN5 454 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 TBC1D2Q9BYX2 928 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 LNPKQ9C0E8 428 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 FYCO1Q9BQS8 1478 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 KIAA0754O94854 1291 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 TUBB4AP04350 444 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 NPM1P06748 294 aaKnown RBP eCLIP6□□□□□ -1.45
PCDH9-203ENST00000456367 BMS1Q14692 1282 aaKnown RBP6□□□□□ -1.45
PCDH9-203ENST00000456367 WDR63Q8IWG1 891 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 ZKSCAN5Q9Y2L8 839 aa6□□□□□ -1.45
PCDH9-203ENST00000456367 KRT222Q8N1A0 295 aa5.99□□□□□ -1.45
PCDH9-203ENST00000456367 TXLNBQ8N3L3 684 aa5.99□□□□□ -1.45
PCDH9-203ENST00000456367 ZNF428Q96B54 188 aa5.99□□□□□ -1.45
PCDH9-203ENST00000456367 TBC1D32Q96NH3 1257 aa5.99□□□□□ -1.45
PCDH9-203ENST00000456367 PRDM10Q9NQV6 1147 aa5.99□□□□□ -1.45
PCDH9-203ENST00000456367 ADAMTS8Q9UP79 889 aa5.99□□□□□ -1.45
PCDH9-203ENST00000456367 CASKIN1Q8WXD9 1431 aa5.99□□□□□ -1.45
PCDH9-203ENST00000456367 SRPK2P78362 688 aaKnown RBP5.99□□□□□ -1.45
PCDH9-203ENST00000456367 XPCQ01831 940 aaPredicted RBP5.99□□□□□ -1.45
PCDH9-203ENST00000456367 HSP90AB4PQ58FF6 505 aa5.99□□□□□ -1.45
PCDH9-203ENST00000456367 KIF18AQ8NI77 898 aa5.99□□□□□ -1.45
PCDH9-203ENST00000456367 UBXN4Q92575 508 aa5.99□□□□□ -1.45
PCDH9-203ENST00000456367 CAVIN2O95810 425 aa5.98□□□□□ -1.45
PCDH9-203ENST00000456367 CPLX2Q6PUV4 134 aaKnown RBP5.98□□□□□ -1.45
PCDH9-203ENST00000456367 RILPL2Q969X0 211 aa5.98□□□□□ -1.45
PCDH9-203ENST00000456367 ANO2Q9NQ90 1003 aa5.98□□□□□ -1.45
PCDH9-203ENST00000456367 NCOA1Q15788 1441 aa5.98□□□□□ -1.45
PCDH9-203ENST00000456367 FAM193AP78312 1265 aa5.98□□□□□ -1.45
PCDH9-203ENST00000456367 CNKSR2Q8WXI2 1034 aa5.98□□□□□ -1.45
PCDH9-203ENST00000456367 TNPO1Q92973 898 aaKnown RBP5.98□□□□□ -1.45
PCDH9-203ENST00000456367 PSMA5P28066 241 aa5.98□□□□□ -1.45
PCDH9-203ENST00000456367 GABPB1Q06547 395 aaPredicted RBP5.98□□□□□ -1.45
PCDH9-203ENST00000456367 MVPQ14764 893 aaKnown RBP5.98□□□□□ -1.45
PCDH9-203ENST00000456367 CCDC183Q5T5S1 534 aa5.98□□□□□ -1.45
PCDH9-203ENST00000456367 AEBP2Q6ZN18 517 aaPredicted RBP5.98□□□□□ -1.45
PCDH9-203ENST00000456367 GIMAP7Q8NHV1 300 aa5.98□□□□□ -1.45
PCDH9-203ENST00000456367 BCL2L13Q9BXK5 485 aa5.98□□□□□ -1.45
PCDH9-203ENST00000456367 LRRFIP1Q32MZ4 808 aaKnown RBP5.98□□□□□ -1.45
PCDH9-203ENST00000456367 DDX11Q96FC9 970 aa5.98□□□□□ -1.45
PCDH9-203ENST00000456367 VPS37CA5D8V6 355 aaPredicted RBP5.97□□□□□ -1.45
PCDH9-203ENST00000456367 GNAI1P63096 354 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 PTPN14Q15678 1187 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 OGFRQ9NZT2 677 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 CBFA2T2O43439 604 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 SLFN5Q08AF3 891 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 SNX21Q969T3 373 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 POLA1P09884 1462 aaPredicted RBP5.97□□□□□ -1.45
PCDH9-203ENST00000456367 POTEB2H3BUK9 544 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 ERC2O15083 957 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 IVLP07476 585 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 NEK4P51957 841 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 UTP14CQ5TAP6 766 aaKnown RBP5.97□□□□□ -1.45
PCDH9-203ENST00000456367 OLFM4Q6UX06 510 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 NOL10Q9BSC4 688 aaKnown RBP5.97□□□□□ -1.45
PCDH9-203ENST00000456367 EIF4G1Q04637 1599 aaKnown RBP5.97□□□□□ -1.45
PCDH9-203ENST00000456367 CARMIL2Q6F5E8 1435 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 ARAP1Q96P48 1450 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 KINO60870 393 aaKnown RBP5.97□□□□□ -1.45
PCDH9-203ENST00000456367 MCM3P25205 808 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 PPP2R1AP30153 589 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 KRT85P78386 507 aa5.97□□□□□ -1.45
PCDH9-203ENST00000456367 RRAGDQ9NQL2 400 aaPredicted RBP5.97□□□□□ -1.45
PCDH9-203ENST00000456367 CCDC184Q52MB2 194 aa5.96□□□□□ -1.45
PCDH9-203ENST00000456367 ZSCAN31Q96LW9 406 aaPredicted RBP5.96□□□□□ -1.45
PCDH9-203ENST00000456367 TIAM1Q13009 1591 aa5.96□□□□□ -1.45
PCDH9-203ENST00000456367 GOLGA6L7A0A1B0GV03 622 aa5.96□□□□□ -1.46
PCDH9-203ENST00000456367 FOXD4L6Q3SYB3 417 aaPredicted RBP5.96□□□□□ -1.46
PCDH9-203ENST00000456367 FOXD4L3Q6VB84 417 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms