RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 SHPRHQ149N8 1683 aa29.73■■■□□ 2.35
TNRC18-208ENST00000455076 WAPLQ7Z5K2 1190 aa29.71■■■□□ 2.35
TNRC18-208ENST00000455076 KIAA1210Q9ULL0 1709 aa29.71■■■□□ 2.35
TNRC18-208ENST00000455076 FMN2Q9NZ56 1722 aa29.68■■■□□ 2.34
TNRC18-208ENST00000455076 TRIM26Q12899 539 aaPredicted RBP29.68■■■□□ 2.34
TNRC18-208ENST00000455076 KDM2AQ9Y2K7 1162 aa29.68■■■□□ 2.34
TNRC18-208ENST00000455076 ADGRB2O60241 1585 aa29.66■■■□□ 2.34
TNRC18-208ENST00000455076 ILDR2Q71H61 639 aa29.66■■■□□ 2.34
TNRC18-208ENST00000455076 SPATA31A6Q5VVP1 1343 aa29.64■■■□□ 2.34
TNRC18-208ENST00000455076 ORAI2Q96SN7 254 aa29.61■■■□□ 2.33
TNRC18-208ENST00000455076 PRAM1Q96QH2 718 aa29.6■■■□□ 2.33
TNRC18-208ENST00000455076 ARHGEF28Q8N1W1 1705 aaKnown RBP29.59■■■□□ 2.33
TNRC18-208ENST00000455076 PHF23Q9BUL5 403 aaPredicted RBP29.59■■■□□ 2.33
TNRC18-208ENST00000455076 SOS2Q07890 1332 aaPredicted RBP29.59■■■□□ 2.33
TNRC18-208ENST00000455076 LRP6O75581 1613 aa29.57■■■□□ 2.32
TNRC18-208ENST00000455076 LRRC59Q96AG4 307 aaKnown RBP29.57■■■□□ 2.32
TNRC18-208ENST00000455076 KIF1AQ12756 1690 aa29.56■■■□□ 2.32
TNRC18-208ENST00000455076 DDX17Q92841 729 aaKnown RBP29.54■■■□□ 2.32
TNRC18-208ENST00000455076 TRAK1Q9UPV9 953 aa29.54■■■□□ 2.32
TNRC18-208ENST00000455076 PNPLA6Q8IY17 1366 aa29.53■■■□□ 2.32
TNRC18-208ENST00000455076 RGS17Q9UGC6 210 aaPredicted RBP29.53■■■□□ 2.32
TNRC18-208ENST00000455076 PXDNQ92626 1479 aa29.53■■■□□ 2.32
TNRC18-208ENST00000455076 NPHP3Q7Z494 1330 aa29.52■■■□□ 2.32
TNRC18-208ENST00000455076 POGKQ9P215 609 aa29.52■■■□□ 2.32
TNRC18-208ENST00000455076 ANKARQ7Z5J8 1434 aa29.52■■■□□ 2.32
TNRC18-208ENST00000455076 ESCO1Q5FWF5 840 aa29.51■■■□□ 2.31
TNRC18-208ENST00000455076 SIN3AQ96ST3 1273 aa29.51■■■□□ 2.31
TNRC18-208ENST00000455076 L3MBTL2Q969R5 705 aa29.5■■■□□ 2.31
TNRC18-208ENST00000455076 USP32Q8NFA0 1604 aa29.49■■■□□ 2.31
TNRC18-208ENST00000455076 COL22A1Q8NFW1 1626 aaPredicted RBP29.49■■■□□ 2.31
TNRC18-208ENST00000455076 RGPD8O14715 1765 aaPredicted RBP29.47■■■□□ 2.31
TNRC18-208ENST00000455076 SAFB2Q14151 953 aaKnown RBP eCLIP29.46■■■□□ 2.31
TNRC18-208ENST00000455076 EIF3AQ14152 1382 aaKnown RBP29.46■■■□□ 2.31
TNRC18-208ENST00000455076 TULP4Q9NRJ4 1543 aa29.45■■■□□ 2.31
TNRC18-208ENST00000455076 TRPM1Q7Z4N2 1603 aa29.45■■■□□ 2.3
TNRC18-208ENST00000455076 NUTM2FA1L443 756 aa29.44■■■□□ 2.3
TNRC18-208ENST00000455076 SOCS7O14512 581 aa29.42■■■□□ 2.3
TNRC18-208ENST00000455076 NBPF1Q3BBV0 1214 aa29.42■■■□□ 2.3
TNRC18-208ENST00000455076 FOXO3O43524 673 aa29.41■■■□□ 2.3
TNRC18-208ENST00000455076 WASLO00401 505 aaPredicted RBP29.39■■■□□ 2.3
TNRC18-208ENST00000455076 NEUROD1Q13562 356 aa29.39■■■□□ 2.3
TNRC18-208ENST00000455076 MINK1Q8N4C8 1332 aaPredicted RBP29.39■■■□□ 2.3
TNRC18-208ENST00000455076 PHF8Q9UPP1 1060 aa29.38■■■□□ 2.29
TNRC18-208ENST00000455076 HIRIP3Q9BW71 556 aaPredicted RBP29.36■■■□□ 2.29
TNRC18-208ENST00000455076 ATP7BP35670 1465 aa29.36■■■□□ 2.29
TNRC18-208ENST00000455076 MEX3CQ5U5Q3 659 aaKnown RBP29.35■■■□□ 2.29
TNRC18-208ENST00000455076 PRR36Q9H6K5 1346 aa29.35■■■□□ 2.29
TNRC18-208ENST00000455076 ITSN1Q15811 1721 aa29.34■■■□□ 2.29
TNRC18-208ENST00000455076 POTEAQ6S8J7 498 aa29.34■■■□□ 2.29
TNRC18-208ENST00000455076 GPRASP1Q5JY77 1395 aa29.32■■■□□ 2.28
TNRC18-208ENST00000455076 SPATA31A3Q5VYP0 1347 aa29.32■■■□□ 2.28
TNRC18-208ENST00000455076 NUTM2BA6NNL0 878 aaPredicted RBP29.32■■■□□ 2.28
TNRC18-208ENST00000455076 NUTM2EB1AL46 878 aaPredicted RBP29.32■■■□□ 2.28
TNRC18-208ENST00000455076 NUTM2AQ8IVF1 878 aaPredicted RBP29.32■■■□□ 2.28
TNRC18-208ENST00000455076 SBNO1A3KN83 1393 aa29.31■■■□□ 2.28
TNRC18-208ENST00000455076 TOPAZ1Q8N9V7 1692 aa29.31■■■□□ 2.28
TNRC18-208ENST00000455076 TNS3Q68CZ2 1445 aa29.3■■■□□ 2.28
TNRC18-208ENST00000455076 XPCQ01831 940 aaPredicted RBP29.3■■■□□ 2.28
TNRC18-208ENST00000455076 ZNF772Q68DY9 489 aaPredicted RBP29.3■■■□□ 2.28
TNRC18-208ENST00000455076 QRICH2Q9H0J4 1663 aa29.29■■■□□ 2.28
TNRC18-208ENST00000455076 KRT28Q7Z3Y7 464 aa29.29■■■□□ 2.28
TNRC18-208ENST00000455076 TRPM3Q9HCF6 1732 aaPredicted RBP29.28■■■□□ 2.28
TNRC18-208ENST00000455076 CENPJQ9HC77 1338 aaPredicted RBP29.28■■■□□ 2.28
TNRC18-208ENST00000455076 TONSLQ96HA7 1378 aa29.27■■■□□ 2.28
TNRC18-208ENST00000455076 ROCK2O75116 1388 aaKnown RBP29.26■■■□□ 2.28
TNRC18-208ENST00000455076 MARF1Q9Y4F3 1742 aaKnown RBP29.26■■■□□ 2.27
TNRC18-208ENST00000455076 PSME1Q06323 249 aa29.26■■■□□ 2.27
TNRC18-208ENST00000455076 NBPF8Q3BBV2 869 aa29.24■■■□□ 2.27
TNRC18-208ENST00000455076 RALGAPBQ86X10 1494 aa29.23■■■□□ 2.27
TNRC18-208ENST00000455076 AFF2P51816 1311 aa29.23■■■□□ 2.27
TNRC18-208ENST00000455076 PMFBP1Q8TBY8 1022 aa29.23■■■□□ 2.27
TNRC18-208ENST00000455076 ALS2Q96Q42 1657 aa29.22■■■□□ 2.27
TNRC18-208ENST00000455076 CDK19Q9BWU1 502 aa29.22■■■□□ 2.27
TNRC18-208ENST00000455076 ARHGEF10O15013 1369 aa29.22■■■□□ 2.27
TNRC18-208ENST00000455076 NUDT16Q96DE0 195 aaKnown RBP29.21■■■□□ 2.27
TNRC18-208ENST00000455076 C8orf37Q96NL8 207 aa29.2■■■□□ 2.26
TNRC18-208ENST00000455076 ABCA3Q99758 1704 aa29.2■■■□□ 2.26
TNRC18-208ENST00000455076 POLR3AO14802 1390 aaPredicted RBP29.18■■■□□ 2.26
TNRC18-208ENST00000455076 ADAMTS2O95450 1211 aa29.18■■■□□ 2.26
TNRC18-208ENST00000455076 CDK12Q9NYV4 1490 aaPredicted RBP29.17■■■□□ 2.26
TNRC18-208ENST00000455076 FNBP4Q8N3X1 1017 aaPredicted RBP29.16■■■□□ 2.26
TNRC18-208ENST00000455076 CCDC61Q9Y6R9 512 aa29.16■■■□□ 2.26
TNRC18-208ENST00000455076 CLSPNQ9HAW4 1339 aa29.15■■■□□ 2.26
TNRC18-208ENST00000455076 SBNO2Q9Y2G9 1366 aa29.14■■■□□ 2.26
TNRC18-208ENST00000455076 PLEKHG3A1L390 1219 aa29.14■■■□□ 2.26
TNRC18-208ENST00000455076 NGLY1Q96IV0 654 aa29.13■■■□□ 2.25
TNRC18-208ENST00000455076 NGDNQ8NEJ9 315 aaKnown RBP29.12■■■□□ 2.25
TNRC18-208ENST00000455076 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.11■■■□□ 2.25
TNRC18-208ENST00000455076 CRYBG1Q9Y4K1 1723 aa29.11■■■□□ 2.25
TNRC18-208ENST00000455076 SLIT2O94813 1529 aa29.09■■■□□ 2.25
TNRC18-208ENST00000455076 RXRBP28702 533 aa29.08■■■□□ 2.25
TNRC18-208ENST00000455076 PPIP5K1Q6PFW1 1433 aa29.08■■■□□ 2.25
TNRC18-208ENST00000455076 BCL9LQ86UU0 1499 aa29.08■■■□□ 2.25
TNRC18-208ENST00000455076 ATRNO75882 1429 aa29.07■■■□□ 2.24
TNRC18-208ENST00000455076 SRPK2P78362 688 aaKnown RBP29.07■■■□□ 2.24
TNRC18-208ENST00000455076 EVC2Q86UK5 1308 aa29.07■■■□□ 2.24
TNRC18-208ENST00000455076 CARD11Q9BXL7 1154 aa29.07■■■□□ 2.24
TNRC18-208ENST00000455076 ACEP12821 1306 aa29.06■■■□□ 2.24
TNRC18-208ENST00000455076 USP21Q9UK80 565 aa29.06■■■□□ 2.24
TNRC18-208ENST00000455076 PCGF6Q9BYE7 350 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms