RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 C19orf44Q9H6X5 657 aa27.53■■■□□ 2
NCL-205ENST00000453992 TRAK1Q9UPV9 953 aa27.53■■■□□ 2
NCL-205ENST00000453992 PLEKHH1Q9ULM0 1364 aa27.52■■■□□ 2
NCL-205ENST00000453992 ADGRB2O60241 1585 aa27.51■■□□□ 1.99
NCL-205ENST00000453992 SCAF1Q9H7N4 1312 aaKnown RBP27.49■■□□□ 1.99
NCL-205ENST00000453992 WAPLQ7Z5K2 1190 aa27.49■■□□□ 1.99
NCL-205ENST00000453992 PRAM1Q96QH2 718 aa27.49■■□□□ 1.99
NCL-205ENST00000453992 POGKQ9P215 609 aa27.47■■□□□ 1.99
NCL-205ENST00000453992 EIF3AQ14152 1382 aaKnown RBP27.47■■□□□ 1.99
NCL-205ENST00000453992 CADPS2Q86UW7 1296 aa27.46■■□□□ 1.99
NCL-205ENST00000453992 QRICH2Q9H0J4 1663 aa27.46■■□□□ 1.99
NCL-205ENST00000453992 CARD11Q9BXL7 1154 aa27.45■■□□□ 1.98
NCL-205ENST00000453992 ATF3P18847 181 aa27.44■■□□□ 1.98
NCL-205ENST00000453992 FMN2Q9NZ56 1722 aa27.44■■□□□ 1.98
NCL-205ENST00000453992 CENPJQ9HC77 1338 aaPredicted RBP27.41■■□□□ 1.98
NCL-205ENST00000453992 HSPA1LP34931 641 aa27.4■■□□□ 1.98
NCL-205ENST00000453992 MST1RQ04912 1400 aa27.4■■□□□ 1.98
NCL-205ENST00000453992 SAFB2Q14151 953 aaKnown RBP eCLIP27.39■■□□□ 1.98
NCL-205ENST00000453992 ROBO1Q9Y6N7 1651 aa27.36■■□□□ 1.97
NCL-205ENST00000453992 SLAIN2Q9P270 581 aa27.36■■□□□ 1.97
NCL-205ENST00000453992 MINK1Q8N4C8 1332 aaPredicted RBP27.34■■□□□ 1.97
NCL-205ENST00000453992 SBNO2Q9Y2G9 1366 aa27.34■■□□□ 1.97
NCL-205ENST00000453992 C1orf167Q5SNV9 1468 aa27.32■■□□□ 1.96
NCL-205ENST00000453992 TULP4Q9NRJ4 1543 aa27.31■■□□□ 1.96
NCL-205ENST00000453992 USP47Q96K76 1375 aa27.31■■□□□ 1.96
NCL-205ENST00000453992 ANKARQ7Z5J8 1434 aa27.31■■□□□ 1.96
NCL-205ENST00000453992 USP32Q8NFA0 1604 aa27.3■■□□□ 1.96
NCL-205ENST00000453992 HIRIP3Q9BW71 556 aaPredicted RBP27.29■■□□□ 1.96
NCL-205ENST00000453992 RGPD8O14715 1765 aaPredicted RBP27.28■■□□□ 1.96
NCL-205ENST00000453992 ITSN1Q15811 1721 aa27.28■■□□□ 1.96
NCL-205ENST00000453992 WASLO00401 505 aaPredicted RBP27.28■■□□□ 1.96
NCL-205ENST00000453992 KIF1AQ12756 1690 aa27.27■■□□□ 1.96
NCL-205ENST00000453992 NHSL1Q5SYE7 1610 aa27.25■■□□□ 1.95
NCL-205ENST00000453992 AHDC1Q5TGY3 1603 aaPredicted RBP27.24■■□□□ 1.95
NCL-205ENST00000453992 TOPAZ1Q8N9V7 1692 aa27.24■■□□□ 1.95
NCL-205ENST00000453992 BRINP3Q76B58 766 aa27.23■■□□□ 1.95
NCL-205ENST00000453992 ATP7BP35670 1465 aa27.23■■□□□ 1.95
NCL-205ENST00000453992 EVC2Q86UK5 1308 aa27.21■■□□□ 1.95
NCL-205ENST00000453992 ST20-MTHFSA0A0A6YYL1 179 aa27.2■■□□□ 1.94
NCL-205ENST00000453992 PHLPP1O60346 1717 aa27.2■■□□□ 1.94
NCL-205ENST00000453992 SLC24A1O60721 1099 aa27.2■■□□□ 1.94
NCL-205ENST00000453992 CDK19Q9BWU1 502 aa27.2■■□□□ 1.94
NCL-205ENST00000453992 NUTM2FA1L443 756 aa27.18■■□□□ 1.94
NCL-205ENST00000453992 TESK2Q96S53 571 aa27.17■■□□□ 1.94
NCL-205ENST00000453992 PRR36Q9H6K5 1346 aa27.16■■□□□ 1.94
NCL-205ENST00000453992 ESCO1Q5FWF5 840 aa27.16■■□□□ 1.94
NCL-205ENST00000453992 ORAI2Q96SN7 254 aa27.16■■□□□ 1.94
NCL-205ENST00000453992 EIF4G2P78344 907 aaKnown RBP eCLIP27.15■■□□□ 1.948e-30■□□□□ 8.2
NCL-205ENST00000453992 COL16A1Q07092 1604 aaPredicted RBP27.15■■□□□ 1.94
NCL-205ENST00000453992 SRPK2P78362 688 aaKnown RBP27.14■■□□□ 1.94
NCL-205ENST00000453992 NUDT16Q96DE0 195 aaKnown RBP27.13■■□□□ 1.93
NCL-205ENST00000453992 PHF8Q9UPP1 1060 aa27.11■■□□□ 1.93
NCL-205ENST00000453992 ATAD2Q6PL18 1390 aa27.1■■□□□ 1.93
NCL-205ENST00000453992 DISP3Q9P2K9 1392 aa27.1■■□□□ 1.93
NCL-205ENST00000453992 ZEB1P37275 1124 aaPredicted RBP27.1■■□□□ 1.93
NCL-205ENST00000453992 CABP2Q9NPB3 220 aa27.1■■□□□ 1.93
NCL-205ENST00000453992 CCDC61Q9Y6R9 512 aa27.1■■□□□ 1.93
NCL-205ENST00000453992 PUS7Q96PZ0 661 aaKnown RBP27.09■■□□□ 1.93
NCL-205ENST00000453992 NPHP3Q7Z494 1330 aa27.09■■□□□ 1.93
NCL-205ENST00000453992 PPIP5K1Q6PFW1 1433 aa27.07■■□□□ 1.92
NCL-205ENST00000453992 PXDNQ92626 1479 aa27.07■■□□□ 1.92
NCL-205ENST00000453992 HSPA5P11021 654 aaKnown RBP27.07■■□□□ 1.92
NCL-205ENST00000453992 TMF1P82094 1093 aa27.06■■□□□ 1.92
NCL-205ENST00000453992 SOS2Q07890 1332 aaPredicted RBP27.04■■□□□ 1.92
NCL-205ENST00000453992 POLR3AO14802 1390 aaPredicted RBP27.04■■□□□ 1.92
NCL-205ENST00000453992 PLEKHG3A1L390 1219 aa27.03■■□□□ 1.92
NCL-205ENST00000453992 FOXO3O43524 673 aa27.03■■□□□ 1.92
NCL-205ENST00000453992 SHPRHQ149N8 1683 aa27.02■■□□□ 1.92
NCL-205ENST00000453992 PMFBP1Q8TBY8 1022 aa27.02■■□□□ 1.92
NCL-205ENST00000453992 CDCA8Q53HL2 280 aa27.01■■□□□ 1.91
NCL-205ENST00000453992 DDX17Q92841 729 aaKnown RBP27.01■■□□□ 1.91
NCL-205ENST00000453992 AKAP12Q02952 1782 aa27.01■■□□□ 1.91
NCL-205ENST00000453992 TRPM3Q9HCF6 1732 aaPredicted RBP27.01■■□□□ 1.91
NCL-205ENST00000453992 NINLQ9Y2I6 1382 aa27■■□□□ 1.91
NCL-205ENST00000453992 NGDNQ8NEJ9 315 aaKnown RBP26.98■■□□□ 1.91
NCL-205ENST00000453992 JCADQ9P266 1359 aa26.97■■□□□ 1.91
NCL-205ENST00000453992 MED1Q15648 1581 aaPredicted RBP26.97■■□□□ 1.91
NCL-205ENST00000453992 LRRC59Q96AG4 307 aaKnown RBP26.97■■□□□ 1.91
NCL-205ENST00000453992 SBNO1A3KN83 1393 aa26.97■■□□□ 1.91
NCL-205ENST00000453992 ACEP12821 1306 aa26.96■■□□□ 1.91
NCL-205ENST00000453992 PSME1Q06323 249 aa26.96■■□□□ 1.91
NCL-205ENST00000453992 ILDR2Q71H61 639 aa26.96■■□□□ 1.91
NCL-205ENST00000453992 CABP1Q9NZU7 370 aa26.96■■□□□ 1.91
NCL-205ENST00000453992 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
NCL-205ENST00000453992 MYOM1P52179 1685 aa26.95■■□□□ 1.91
NCL-205ENST00000453992 KRT28Q7Z3Y7 464 aa26.95■■□□□ 1.9
NCL-205ENST00000453992 COL22A1Q8NFW1 1626 aaPredicted RBP26.94■■□□□ 1.9
NCL-205ENST00000453992 ALS2Q96Q42 1657 aa26.94■■□□□ 1.9
NCL-205ENST00000453992 BRD4O60885 1362 aaPredicted RBP26.94■■□□□ 1.9
NCL-205ENST00000453992 TNS3Q68CZ2 1445 aa26.93■■□□□ 1.9
NCL-205ENST00000453992 CPSF1Q10570 1443 aaKnown RBP26.92■■□□□ 1.9
NCL-205ENST00000453992 XPCQ01831 940 aaPredicted RBP26.92■■□□□ 1.9
NCL-205ENST00000453992 NRKQ7Z2Y5 1582 aa26.92■■□□□ 1.9
NCL-205ENST00000453992 PNPLA6Q8IY17 1366 aa26.91■■□□□ 1.9
NCL-205ENST00000453992 CD163L1Q9NR16 1453 aa26.91■■□□□ 1.9
NCL-205ENST00000453992 USP6P35125 1406 aa26.9■■□□□ 1.9
NCL-205ENST00000453992 SPATA31A3Q5VYP0 1347 aa26.9■■□□□ 1.9
NCL-205ENST00000453992 ARHGEF10O15013 1369 aa26.88■■□□□ 1.89
NCL-205ENST00000453992 TMC1Q8TDI8 760 aa26.88■■□□□ 1.89
NCL-205ENST00000453992 ZNF692Q9BU19 519 aaPredicted RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms