RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 PLEKHH1Q9ULM0 1364 aa27.94■■■□□ 2.06
SNX11-203ENST00000452859 KIAA1210Q9ULL0 1709 aa27.93■■■□□ 2.06
SNX11-203ENST00000452859 BRINP3Q76B58 766 aa27.91■■■□□ 2.06
SNX11-203ENST00000452859 SAFB2Q14151 953 aaKnown RBP eCLIP27.89■■■□□ 2.06
SNX11-203ENST00000452859 CDC42BPGQ6DT37 1551 aa27.88■■■□□ 2.05
SNX11-203ENST00000452859 NBPF1Q3BBV0 1214 aa27.87■■■□□ 2.05
SNX11-203ENST00000452859 C1orf167Q5SNV9 1468 aa27.87■■■□□ 2.05
SNX11-203ENST00000452859 CLSPNQ9HAW4 1339 aa27.87■■■□□ 2.05
SNX11-203ENST00000452859 PHLPP1O60346 1717 aa27.82■■■□□ 2.04
SNX11-203ENST00000452859 ESCO1Q5FWF5 840 aa27.8■■■□□ 2.04
SNX11-203ENST00000452859 ORAI2Q96SN7 254 aa27.8■■■□□ 2.04
SNX11-203ENST00000452859 AHDC1Q5TGY3 1603 aaPredicted RBP27.8■■■□□ 2.04
SNX11-203ENST00000452859 NUTM2FA1L443 756 aa27.79■■■□□ 2.04
SNX11-203ENST00000452859 ROCK2O75116 1388 aaKnown RBP27.79■■■□□ 2.04
SNX11-203ENST00000452859 MINK1Q8N4C8 1332 aaPredicted RBP27.78■■■□□ 2.04
SNX11-203ENST00000452859 CCER1Q8TC90 406 aaPredicted RBP27.78■■■□□ 2.04
SNX11-203ENST00000452859 NBPF8Q3BBV2 869 aa27.76■■■□□ 2.03
SNX11-203ENST00000452859 HIRIP3Q9BW71 556 aaPredicted RBP27.76■■■□□ 2.03
SNX11-203ENST00000452859 TRPM1Q7Z4N2 1603 aa27.76■■■□□ 2.03
SNX11-203ENST00000452859 ARHGEF28Q8N1W1 1705 aaKnown RBP27.76■■■□□ 2.03
SNX11-203ENST00000452859 EIF3AQ14152 1382 aaKnown RBP27.75■■■□□ 2.03
SNX11-203ENST00000452859 JCADQ9P266 1359 aa27.75■■■□□ 2.03
SNX11-203ENST00000452859 FMN2Q9NZ56 1722 aa27.74■■■□□ 2.03
SNX11-203ENST00000452859 TIMELESSQ9UNS1 1208 aa27.74■■■□□ 2.03
SNX11-203ENST00000452859 ADGRB2O60241 1585 aa27.73■■■□□ 2.03
SNX11-203ENST00000452859 COL16A1Q07092 1604 aaPredicted RBP27.73■■■□□ 2.03
SNX11-203ENST00000452859 WASLO00401 505 aaPredicted RBP27.72■■■□□ 2.03
SNX11-203ENST00000452859 LRRC59Q96AG4 307 aaKnown RBP27.72■■■□□ 2.03
SNX11-203ENST00000452859 CENPJQ9HC77 1338 aaPredicted RBP27.72■■■□□ 2.03
SNX11-203ENST00000452859 NHSL1Q5SYE7 1610 aa27.72■■■□□ 2.03
SNX11-203ENST00000452859 NPHP3Q7Z494 1330 aa27.71■■■□□ 2.03
SNX11-203ENST00000452859 DDX17Q92841 729 aaKnown RBP27.7■■■□□ 2.03
SNX11-203ENST00000452859 ANKARQ7Z5J8 1434 aa27.69■■■□□ 2.02
SNX11-203ENST00000452859 DISP3Q9P2K9 1392 aa27.69■■■□□ 2.02
SNX11-203ENST00000452859 CARD11Q9BXL7 1154 aa27.67■■■□□ 2.02
SNX11-203ENST00000452859 GPRASP1Q5JY77 1395 aa27.67■■■□□ 2.02
SNX11-203ENST00000452859 FOXO3O43524 673 aa27.67■■■□□ 2.02
SNX11-203ENST00000452859 PHF8Q9UPP1 1060 aa27.67■■■□□ 2.02
SNX11-203ENST00000452859 SOS2Q07890 1332 aaPredicted RBP27.66■■■□□ 2.02
SNX11-203ENST00000452859 RALGAPBQ86X10 1494 aa27.64■■■□□ 2.02
SNX11-203ENST00000452859 SPATA31A6Q5VVP1 1343 aa27.64■■■□□ 2.02
SNX11-203ENST00000452859 MED1Q15648 1581 aaPredicted RBP27.64■■■□□ 2.01
SNX11-203ENST00000452859 CDK19Q9BWU1 502 aa27.63■■■□□ 2.01
SNX11-203ENST00000452859 KIF1AQ12756 1690 aa27.63■■■□□ 2.01
SNX11-203ENST00000452859 TULP4Q9NRJ4 1543 aa27.62■■■□□ 2.01
SNX11-203ENST00000452859 PHF23Q9BUL5 403 aaPredicted RBP27.61■■■□□ 2.01
SNX11-203ENST00000452859 NUDT16Q96DE0 195 aaKnown RBP27.59■■■□□ 2.01
SNX11-203ENST00000452859 SHPRHQ149N8 1683 aa27.59■■■□□ 2.01
SNX11-203ENST00000452859 RGPD8O14715 1765 aaPredicted RBP27.58■■■□□ 2.01
SNX11-203ENST00000452859 PRR36Q9H6K5 1346 aa27.58■■■□□ 2.01
SNX11-203ENST00000452859 PSME1Q06323 249 aa27.58■■■□□ 2.01
SNX11-203ENST00000452859 SRPK2P78362 688 aaKnown RBP27.57■■■□□ 2
SNX11-203ENST00000452859 XPCQ01831 940 aaPredicted RBP27.57■■■□□ 2
SNX11-203ENST00000452859 KRT28Q7Z3Y7 464 aa27.57■■■□□ 2
SNX11-203ENST00000452859 PMFBP1Q8TBY8 1022 aa27.57■■■□□ 2
SNX11-203ENST00000452859 QRICH2Q9H0J4 1663 aa27.56■■■□□ 2
SNX11-203ENST00000452859 USP32Q8NFA0 1604 aa27.56■■■□□ 2
SNX11-203ENST00000452859 EVC2Q86UK5 1308 aa27.55■■■□□ 2
SNX11-203ENST00000452859 PXDNQ92626 1479 aa27.55■■■□□ 2
SNX11-203ENST00000452859 CCDC61Q9Y6R9 512 aa27.55■■■□□ 2
SNX11-203ENST00000452859 PNPLA6Q8IY17 1366 aa27.55■■■□□ 2
SNX11-203ENST00000452859 NGDNQ8NEJ9 315 aaKnown RBP27.54■■■□□ 2
SNX11-203ENST00000452859 NUTM2BA6NNL0 878 aaPredicted RBP27.52■■■□□ 2
SNX11-203ENST00000452859 NUTM2EB1AL46 878 aaPredicted RBP27.52■■■□□ 2
SNX11-203ENST00000452859 MEX3CQ5U5Q3 659 aaKnown RBP27.52■■■□□ 2
SNX11-203ENST00000452859 NUTM2AQ8IVF1 878 aaPredicted RBP27.52■■■□□ 2
SNX11-203ENST00000452859 ATP7BP35670 1465 aa27.52■■■□□ 2
SNX11-203ENST00000452859 CABP2Q9NPB3 220 aa27.5■■□□□ 1.99
SNX11-203ENST00000452859 ITSN1Q15811 1721 aa27.49■■□□□ 1.99
SNX11-203ENST00000452859 SPATA31A3Q5VYP0 1347 aa27.48■■□□□ 1.99
SNX11-203ENST00000452859 SBNO2Q9Y2G9 1366 aa27.48■■□□□ 1.99
SNX11-203ENST00000452859 SBNO1A3KN83 1393 aa27.47■■□□□ 1.99
SNX11-203ENST00000452859 SLC24A1O60721 1099 aa27.46■■□□□ 1.99
SNX11-203ENST00000452859 PLEKHG3A1L390 1219 aa27.45■■□□□ 1.99
SNX11-203ENST00000452859 LRP6O75581 1613 aa27.44■■□□□ 1.98
SNX11-203ENST00000452859 ZEB1P37275 1124 aaPredicted RBP27.44■■□□□ 1.98
SNX11-203ENST00000452859 LMOD2Q6P5Q4 547 aa27.44■■□□□ 1.98
SNX11-203ENST00000452859 TNS3Q68CZ2 1445 aa27.44■■□□□ 1.98
SNX11-203ENST00000452859 ACEP12821 1306 aa27.41■■□□□ 1.98
SNX11-203ENST00000452859 ARHGEF10O15013 1369 aa27.41■■□□□ 1.98
SNX11-203ENST00000452859 PPIP5K1Q6PFW1 1433 aa27.41■■□□□ 1.98
SNX11-203ENST00000452859 ST20-MTHFSA0A0A6YYL1 179 aa27.41■■□□□ 1.98
SNX11-203ENST00000452859 COL22A1Q8NFW1 1626 aaPredicted RBP27.4■■□□□ 1.98
SNX11-203ENST00000452859 POLR3AO14802 1390 aaPredicted RBP27.4■■□□□ 1.98
SNX11-203ENST00000452859 TOPAZ1Q8N9V7 1692 aa27.4■■□□□ 1.98
SNX11-203ENST00000452859 ATAD2Q6PL18 1390 aa27.39■■□□□ 1.98
SNX11-203ENST00000452859 PAK3O75914 559 aaPredicted RBP27.39■■□□□ 1.98
SNX11-203ENST00000452859 USP47Q96K76 1375 aa27.39■■□□□ 1.97
SNX11-203ENST00000452859 ADAMTS2O95450 1211 aa27.38■■□□□ 1.97
SNX11-203ENST00000452859 CABP1Q9NZU7 370 aa27.38■■□□□ 1.97
SNX11-203ENST00000452859 HAP1P54257 671 aaPredicted RBP27.37■■□□□ 1.97
SNX11-203ENST00000452859 ZNF772Q68DY9 489 aaPredicted RBP27.35■■□□□ 1.97
SNX11-203ENST00000452859 C8orf37Q96NL8 207 aa27.35■■□□□ 1.97
SNX11-203ENST00000452859 RGS17Q9UGC6 210 aaPredicted RBP27.35■■□□□ 1.97
SNX11-203ENST00000452859 NGLY1Q96IV0 654 aa27.34■■□□□ 1.97
SNX11-203ENST00000452859 PUS7Q96PZ0 661 aaKnown RBP27.34■■□□□ 1.97
SNX11-203ENST00000452859 TESK2Q96S53 571 aa27.33■■□□□ 1.97
SNX11-203ENST00000452859 TRPM3Q9HCF6 1732 aaPredicted RBP27.31■■□□□ 1.96
SNX11-203ENST00000452859 BRD4O60885 1362 aaPredicted RBP27.31■■□□□ 1.96
SNX11-203ENST00000452859 ZNF692Q9BU19 519 aaPredicted RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms