RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ORAI2Q96SN7 254 aa23.38■■□□□ 1.33
SCAMP4-205ENST00000452128 CDC42BPGQ6DT37 1551 aa23.37■■□□□ 1.33
SCAMP4-205ENST00000452128 COL16A1Q07092 1604 aaPredicted RBP23.37■■□□□ 1.33
SCAMP4-205ENST00000452128 NBPF1Q3BBV0 1214 aa23.36■■□□□ 1.33
SCAMP4-205ENST00000452128 TRAK1Q9UPV9 953 aa23.35■■□□□ 1.33
SCAMP4-205ENST00000452128 DDX17Q92841 729 aaKnown RBP23.34■■□□□ 1.33
SCAMP4-205ENST00000452128 MED1Q15648 1581 aaPredicted RBP23.34■■□□□ 1.33
SCAMP4-205ENST00000452128 JCADQ9P266 1359 aa23.33■■□□□ 1.33
SCAMP4-205ENST00000452128 NEUROD1Q13562 356 aa23.33■■□□□ 1.33
SCAMP4-205ENST00000452128 PHLPP1O60346 1717 aa23.32■■□□□ 1.32
SCAMP4-205ENST00000452128 SOS2Q07890 1332 aaPredicted RBP23.31■■□□□ 1.32
SCAMP4-205ENST00000452128 ILDR2Q71H61 639 aa23.29■■□□□ 1.32
SCAMP4-205ENST00000452128 KIAA1210Q9ULL0 1709 aa23.29■■□□□ 1.32
SCAMP4-205ENST00000452128 NHSL1Q5SYE7 1610 aa23.29■■□□□ 1.32
SCAMP4-205ENST00000452128 SAFB2Q14151 953 aaKnown RBP eCLIP23.28■■□□□ 1.32
SCAMP4-205ENST00000452128 POGKQ9P215 609 aa23.28■■□□□ 1.32
SCAMP4-205ENST00000452128 RGS17Q9UGC6 210 aaPredicted RBP23.27■■□□□ 1.32
SCAMP4-205ENST00000452128 NBPF8Q3BBV2 869 aa23.26■■□□□ 1.31
SCAMP4-205ENST00000452128 ESCO1Q5FWF5 840 aa23.26■■□□□ 1.31
SCAMP4-205ENST00000452128 LRRC59Q96AG4 307 aaKnown RBP23.25■■□□□ 1.31
SCAMP4-205ENST00000452128 NUTM2FA1L443 756 aa23.24■■□□□ 1.31
SCAMP4-205ENST00000452128 FMN2Q9NZ56 1722 aa23.24■■□□□ 1.31
SCAMP4-205ENST00000452128 ADGRB2O60241 1585 aa23.23■■□□□ 1.31
SCAMP4-205ENST00000452128 SPATA31A6Q5VVP1 1343 aa23.23■■□□□ 1.31
SCAMP4-205ENST00000452128 WASLO00401 505 aaPredicted RBP23.21■■□□□ 1.31
SCAMP4-205ENST00000452128 FOXO3O43524 673 aa23.21■■□□□ 1.31
SCAMP4-205ENST00000452128 HIRIP3Q9BW71 556 aaPredicted RBP23.21■■□□□ 1.31
SCAMP4-205ENST00000452128 MINK1Q8N4C8 1332 aaPredicted RBP23.21■■□□□ 1.31
SCAMP4-205ENST00000452128 PXDNQ92626 1479 aa23.2■■□□□ 1.3
SCAMP4-205ENST00000452128 PNPLA6Q8IY17 1366 aa23.2■■□□□ 1.3
SCAMP4-205ENST00000452128 PRR36Q9H6K5 1346 aa23.2■■□□□ 1.3
SCAMP4-205ENST00000452128 PCGF6Q9BYE7 350 aa23.2■■□□□ 1.3
SCAMP4-205ENST00000452128 LRP6O75581 1613 aa23.19■■□□□ 1.3
SCAMP4-205ENST00000452128 ANKARQ7Z5J8 1434 aa23.19■■□□□ 1.3
SCAMP4-205ENST00000452128 NPHP3Q7Z494 1330 aa23.19■■□□□ 1.3
SCAMP4-205ENST00000452128 ARHGEF28Q8N1W1 1705 aaKnown RBP23.19■■□□□ 1.3
SCAMP4-205ENST00000452128 SHPRHQ149N8 1683 aa23.19■■□□□ 1.3
SCAMP4-205ENST00000452128 GPRASP1Q5JY77 1395 aa23.17■■□□□ 1.3
SCAMP4-205ENST00000452128 PHF8Q9UPP1 1060 aa23.17■■□□□ 1.3
SCAMP4-205ENST00000452128 USP32Q8NFA0 1604 aa23.16■■□□□ 1.3
SCAMP4-205ENST00000452128 TRPM1Q7Z4N2 1603 aa23.14■■□□□ 1.29
SCAMP4-205ENST00000452128 XPCQ01831 940 aaPredicted RBP23.12■■□□□ 1.29
SCAMP4-205ENST00000452128 CDK19Q9BWU1 502 aa23.12■■□□□ 1.29
SCAMP4-205ENST00000452128 TULP4Q9NRJ4 1543 aa23.12■■□□□ 1.29
SCAMP4-205ENST00000452128 KRT28Q7Z3Y7 464 aa23.11■■□□□ 1.29
SCAMP4-205ENST00000452128 TONSLQ96HA7 1378 aa23.11■■□□□ 1.29
SCAMP4-205ENST00000452128 SPATA31A3Q5VYP0 1347 aa23.1■■□□□ 1.29
SCAMP4-205ENST00000452128 CENPJQ9HC77 1338 aaPredicted RBP23.1■■□□□ 1.29
SCAMP4-205ENST00000452128 RGPD8O14715 1765 aaPredicted RBP23.1■■□□□ 1.29
SCAMP4-205ENST00000452128 SOCS7O14512 581 aa23.1■■□□□ 1.29
SCAMP4-205ENST00000452128 POTEAQ6S8J7 498 aa23.1■■□□□ 1.29
SCAMP4-205ENST00000452128 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
SCAMP4-205ENST00000452128 CLSPNQ9HAW4 1339 aa23.09■■□□□ 1.29
SCAMP4-205ENST00000452128 NUDT16Q96DE0 195 aaKnown RBP23.09■■□□□ 1.29
SCAMP4-205ENST00000452128 ROCK2O75116 1388 aaKnown RBP23.09■■□□□ 1.29
SCAMP4-205ENST00000452128 EIF3AQ14152 1382 aaKnown RBP23.09■■□□□ 1.29
SCAMP4-205ENST00000452128 PMFBP1Q8TBY8 1022 aa23.08■■□□□ 1.29
SCAMP4-205ENST00000452128 KIF1AQ12756 1690 aa23.08■■□□□ 1.29
SCAMP4-205ENST00000452128 ATP7BP35670 1465 aa23.07■■□□□ 1.28
SCAMP4-205ENST00000452128 SBNO1A3KN83 1393 aa23.06■■□□□ 1.28
SCAMP4-205ENST00000452128 NUTM2BA6NNL0 878 aaPredicted RBP23.06■■□□□ 1.28
SCAMP4-205ENST00000452128 NUTM2EB1AL46 878 aaPredicted RBP23.06■■□□□ 1.28
SCAMP4-205ENST00000452128 NUTM2AQ8IVF1 878 aaPredicted RBP23.06■■□□□ 1.28
SCAMP4-205ENST00000452128 PLEKHG3A1L390 1219 aa23.05■■□□□ 1.28
SCAMP4-205ENST00000452128 RALGAPBQ86X10 1494 aa23.05■■□□□ 1.28
SCAMP4-205ENST00000452128 COL22A1Q8NFW1 1626 aaPredicted RBP23.04■■□□□ 1.28
SCAMP4-205ENST00000452128 CCDC61Q9Y6R9 512 aa23.03■■□□□ 1.28
SCAMP4-205ENST00000452128 PSME1Q06323 249 aa23.02■■□□□ 1.28
SCAMP4-205ENST00000452128 TIMELESSQ9UNS1 1208 aa23.02■■□□□ 1.28
SCAMP4-205ENST00000452128 POLR3AO14802 1390 aaPredicted RBP23.01■■□□□ 1.27
SCAMP4-205ENST00000452128 CARD11Q9BXL7 1154 aa23■■□□□ 1.27
SCAMP4-205ENST00000452128 TNS3Q68CZ2 1445 aa22.99■■□□□ 1.27
SCAMP4-205ENST00000452128 MEX3CQ5U5Q3 659 aaKnown RBP22.98■■□□□ 1.27
SCAMP4-205ENST00000452128 CABP2Q9NPB3 220 aa22.98■■□□□ 1.27
SCAMP4-205ENST00000452128 SBNO2Q9Y2G9 1366 aa22.98■■□□□ 1.27
SCAMP4-205ENST00000452128 FNBP4Q8N3X1 1017 aaPredicted RBP22.97■■□□□ 1.27
SCAMP4-205ENST00000452128 ADAMTS2O95450 1211 aa22.96■■□□□ 1.27
SCAMP4-205ENST00000452128 ZNF772Q68DY9 489 aaPredicted RBP22.96■■□□□ 1.27
SCAMP4-205ENST00000452128 NGDNQ8NEJ9 315 aaKnown RBP22.96■■□□□ 1.27
SCAMP4-205ENST00000452128 AFF2P51816 1311 aa22.96■■□□□ 1.27
SCAMP4-205ENST00000452128 ACEP12821 1306 aa22.95■■□□□ 1.26
SCAMP4-205ENST00000452128 TRPM3Q9HCF6 1732 aaPredicted RBP22.95■■□□□ 1.26
SCAMP4-205ENST00000452128 QRICH2Q9H0J4 1663 aa22.94■■□□□ 1.26
SCAMP4-205ENST00000452128 EVC2Q86UK5 1308 aa22.94■■□□□ 1.26
SCAMP4-205ENST00000452128 C8orf37Q96NL8 207 aa22.94■■□□□ 1.26
SCAMP4-205ENST00000452128 TOPAZ1Q8N9V7 1692 aa22.93■■□□□ 1.26
SCAMP4-205ENST00000452128 ARHGEF10O15013 1369 aa22.93■■□□□ 1.26
SCAMP4-205ENST00000452128 SRPK2P78362 688 aaKnown RBP22.93■■□□□ 1.26
SCAMP4-205ENST00000452128 CABLES1Q8TDN4 633 aa22.92■■□□□ 1.26
SCAMP4-205ENST00000452128 TESK2Q96S53 571 aa22.92■■□□□ 1.26
SCAMP4-205ENST00000452128 CABP1Q9NZU7 370 aa22.91■■□□□ 1.26
SCAMP4-205ENST00000452128 NGLY1Q96IV0 654 aa22.9■■□□□ 1.26
SCAMP4-205ENST00000452128 PPIP5K1Q6PFW1 1433 aa22.9■■□□□ 1.26
SCAMP4-205ENST00000452128 ALS2Q96Q42 1657 aa22.89■■□□□ 1.25
SCAMP4-205ENST00000452128 BCL9LQ86UU0 1499 aa22.88■■□□□ 1.25
SCAMP4-205ENST00000452128 ITSN1Q15811 1721 aa22.88■■□□□ 1.25
SCAMP4-205ENST00000452128 SSH2Q76I76 1423 aa22.87■■□□□ 1.25
SCAMP4-205ENST00000452128 ST20-MTHFSA0A0A6YYL1 179 aa22.86■■□□□ 1.25
SCAMP4-205ENST00000452128 CCER1Q8TC90 406 aaPredicted RBP22.86■■□□□ 1.25
SCAMP4-205ENST00000452128 PUS7Q96PZ0 661 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms