RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 PRAM1Q96QH2 718 aa17.24■□□□□ 0.35
SMPD4-212ENST00000451542 MST1RQ04912 1400 aa17.22■□□□□ 0.35
SMPD4-212ENST00000451542 CDC42BPGQ6DT37 1551 aa17.21■□□□□ 0.35
SMPD4-212ENST00000451542 PLEKHH1Q9ULM0 1364 aa17.2■□□□□ 0.34
SMPD4-212ENST00000451542 SAFB2Q14151 953 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMPD4-212ENST00000451542 BRINP3Q76B58 766 aa17.2■□□□□ 0.34
SMPD4-212ENST00000451542 CCER1Q8TC90 406 aaPredicted RBP17.19■□□□□ 0.34
SMPD4-212ENST00000451542 C1orf167Q5SNV9 1468 aa17.18■□□□□ 0.34
SMPD4-212ENST00000451542 EIF3AQ14152 1382 aaKnown RBP17.18■□□□□ 0.34
SMPD4-212ENST00000451542 PHLPP1O60346 1717 aa17.17■□□□□ 0.34
SMPD4-212ENST00000451542 NBPF1Q3BBV0 1214 aa17.17■□□□□ 0.34
SMPD4-212ENST00000451542 ESCO1Q5FWF5 840 aa17.17■□□□□ 0.34
SMPD4-212ENST00000451542 TIMELESSQ9UNS1 1208 aa17.17■□□□□ 0.34
SMPD4-212ENST00000451542 ROCK2O75116 1388 aaKnown RBP17.16■□□□□ 0.34
SMPD4-212ENST00000451542 MINK1Q8N4C8 1332 aaPredicted RBP17.15■□□□□ 0.34
SMPD4-212ENST00000451542 AHDC1Q5TGY3 1603 aaPredicted RBP17.14■□□□□ 0.33
SMPD4-212ENST00000451542 JCADQ9P266 1359 aa17.14■□□□□ 0.33
SMPD4-212ENST00000451542 ARHGEF28Q8N1W1 1705 aaKnown RBP17.13■□□□□ 0.33
SMPD4-212ENST00000451542 NUTM2FA1L443 756 aa17.13■□□□□ 0.33
SMPD4-212ENST00000451542 LRRC59Q96AG4 307 aaKnown RBP17.13■□□□□ 0.33
SMPD4-212ENST00000451542 ORAI2Q96SN7 254 aa17.13■□□□□ 0.33
SMPD4-212ENST00000451542 TRPM1Q7Z4N2 1603 aa17.13■□□□□ 0.33
SMPD4-212ENST00000451542 FMN2Q9NZ56 1722 aa17.13■□□□□ 0.33
SMPD4-212ENST00000451542 NPHP3Q7Z494 1330 aa17.12■□□□□ 0.33
SMPD4-212ENST00000451542 CENPJQ9HC77 1338 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-212ENST00000451542 ADGRB2O60241 1585 aa17.11■□□□□ 0.33
SMPD4-212ENST00000451542 WASLO00401 505 aaPredicted RBP17.11■□□□□ 0.33
SMPD4-212ENST00000451542 HIRIP3Q9BW71 556 aaPredicted RBP17.11■□□□□ 0.33
SMPD4-212ENST00000451542 ANKARQ7Z5J8 1434 aa17.11■□□□□ 0.33
SMPD4-212ENST00000451542 CARD11Q9BXL7 1154 aa17.1■□□□□ 0.33
SMPD4-212ENST00000451542 NHSL1Q5SYE7 1610 aa17.1■□□□□ 0.33
SMPD4-212ENST00000451542 NBPF8Q3BBV2 869 aa17.09■□□□□ 0.33
SMPD4-212ENST00000451542 DISP3Q9P2K9 1392 aa17.09■□□□□ 0.33
SMPD4-212ENST00000451542 COL16A1Q07092 1604 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-212ENST00000451542 GPRASP1Q5JY77 1395 aa17.08■□□□□ 0.32
SMPD4-212ENST00000451542 SPATA31A6Q5VVP1 1343 aa17.08■□□□□ 0.32
SMPD4-212ENST00000451542 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.32
SMPD4-212ENST00000451542 PHF8Q9UPP1 1060 aa17.08■□□□□ 0.32
SMPD4-212ENST00000451542 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
SMPD4-212ENST00000451542 FOXO3O43524 673 aa17.07■□□□□ 0.32
SMPD4-212ENST00000451542 RALGAPBQ86X10 1494 aa17.06■□□□□ 0.32
SMPD4-212ENST00000451542 SOS2Q07890 1332 aaPredicted RBP17.06■□□□□ 0.32
SMPD4-212ENST00000451542 PSME1Q06323 249 aa17.06■□□□□ 0.32
SMPD4-212ENST00000451542 CDK19Q9BWU1 502 aa17.05■□□□□ 0.32
SMPD4-212ENST00000451542 TULP4Q9NRJ4 1543 aa17.05■□□□□ 0.32
SMPD4-212ENST00000451542 SLC24A1O60721 1099 aa17.04■□□□□ 0.32
SMPD4-212ENST00000451542 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
SMPD4-212ENST00000451542 DDX17Q92841 729 aaKnown RBP17.04■□□□□ 0.32
SMPD4-212ENST00000451542 MED1Q15648 1581 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-212ENST00000451542 EVC2Q86UK5 1308 aa17.03■□□□□ 0.32
SMPD4-212ENST00000451542 RGPD8O14715 1765 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-212ENST00000451542 NUDT16Q96DE0 195 aaKnown RBP17.03■□□□□ 0.32
SMPD4-212ENST00000451542 SHPRHQ149N8 1683 aa17.03■□□□□ 0.32
SMPD4-212ENST00000451542 QRICH2Q9H0J4 1663 aa17.02■□□□□ 0.32
SMPD4-212ENST00000451542 MEX3CQ5U5Q3 659 aaKnown RBP17.02■□□□□ 0.32
SMPD4-212ENST00000451542 KRT28Q7Z3Y7 464 aa17.02■□□□□ 0.32
SMPD4-212ENST00000451542 NGDNQ8NEJ9 315 aaKnown RBP17.02■□□□□ 0.32
SMPD4-212ENST00000451542 CCDC61Q9Y6R9 512 aa17.02■□□□□ 0.32
SMPD4-212ENST00000451542 ITSN1Q15811 1721 aa17.01■□□□□ 0.31
SMPD4-212ENST00000451542 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
SMPD4-212ENST00000451542 XPCQ01831 940 aaPredicted RBP16.99■□□□□ 0.31
SMPD4-212ENST00000451542 PRR36Q9H6K5 1346 aa16.98■□□□□ 0.31
SMPD4-212ENST00000451542 NUTM2BA6NNL0 878 aaPredicted RBP16.98■□□□□ 0.31
SMPD4-212ENST00000451542 NUTM2EB1AL46 878 aaPredicted RBP16.98■□□□□ 0.31
SMPD4-212ENST00000451542 NUTM2AQ8IVF1 878 aaPredicted RBP16.98■□□□□ 0.31
SMPD4-212ENST00000451542 USP32Q8NFA0 1604 aa16.98■□□□□ 0.31
SMPD4-212ENST00000451542 PNPLA6Q8IY17 1366 aa16.98■□□□□ 0.31
SMPD4-212ENST00000451542 SBNO2Q9Y2G9 1366 aa16.97■□□□□ 0.31
SMPD4-212ENST00000451542 ATP7BP35670 1465 aa16.97■□□□□ 0.31
SMPD4-212ENST00000451542 PXDNQ92626 1479 aa16.97■□□□□ 0.31
SMPD4-212ENST00000451542 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
SMPD4-212ENST00000451542 SBNO1A3KN83 1393 aa16.96■□□□□ 0.31
SMPD4-212ENST00000451542 SPATA31A3Q5VYP0 1347 aa16.96■□□□□ 0.3
SMPD4-212ENST00000451542 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
SMPD4-212ENST00000451542 ARHGEF10O15013 1369 aa16.94■□□□□ 0.3
SMPD4-212ENST00000451542 PLEKHG3A1L390 1219 aa16.94■□□□□ 0.3
SMPD4-212ENST00000451542 HAP1P54257 671 aaPredicted RBP16.94■□□□□ 0.3
SMPD4-212ENST00000451542 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
SMPD4-212ENST00000451542 TNS3Q68CZ2 1445 aa16.93■□□□□ 0.3
SMPD4-212ENST00000451542 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-212ENST00000451542 PPIP5K1Q6PFW1 1433 aa16.92■□□□□ 0.3
SMPD4-212ENST00000451542 ACEP12821 1306 aa16.92■□□□□ 0.3
SMPD4-212ENST00000451542 ST20-MTHFSA0A0A6YYL1 179 aa16.91■□□□□ 0.3
SMPD4-212ENST00000451542 ZNF772Q68DY9 489 aaPredicted RBP16.91■□□□□ 0.3
SMPD4-212ENST00000451542 USP47Q96K76 1375 aa16.9■□□□□ 0.3
SMPD4-212ENST00000451542 COL22A1Q8NFW1 1626 aaPredicted RBP16.9■□□□□ 0.3
SMPD4-212ENST00000451542 PUS7Q96PZ0 661 aaKnown RBP16.9■□□□□ 0.3
SMPD4-212ENST00000451542 TOPAZ1Q8N9V7 1692 aa16.9■□□□□ 0.3
SMPD4-212ENST00000451542 POLR3AO14802 1390 aaPredicted RBP16.89■□□□□ 0.3
SMPD4-212ENST00000451542 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.3
SMPD4-212ENST00000451542 LRP6O75581 1613 aa16.89■□□□□ 0.29
SMPD4-212ENST00000451542 ADAMTS2O95450 1211 aa16.89■□□□□ 0.29
SMPD4-212ENST00000451542 CDCA8Q53HL2 280 aa16.89■□□□□ 0.29
SMPD4-212ENST00000451542 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-212ENST00000451542 CABP1Q9NZU7 370 aa16.89■□□□□ 0.29
SMPD4-212ENST00000451542 NGLY1Q96IV0 654 aa16.88■□□□□ 0.29
SMPD4-212ENST00000451542 TMF1P82094 1093 aa16.87■□□□□ 0.29
SMPD4-212ENST00000451542 C8orf37Q96NL8 207 aa16.87■□□□□ 0.29
SMPD4-212ENST00000451542 TMC1Q8TDI8 760 aa16.85■□□□□ 0.29
SMPD4-212ENST00000451542 TRPM3Q9HCF6 1732 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms