RNA–Protein interactions for RNA: ENST00000450510.2

HOXD8-203, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HOXD8, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-203ENST00000450510 NBPF1Q3BBV0 1214 aa25.27■■□□□ 1.64
HOXD8-203ENST00000450510 MSH6P52701 1360 aa25.26■■□□□ 1.63
HOXD8-203ENST00000450510 ANP32CO43423 234 aa25.25■■□□□ 1.63
HOXD8-203ENST00000450510 TOM1O60784 492 aa25.24■■□□□ 1.63
HOXD8-203ENST00000450510 RBM33Q96EV2 1170 aaKnown RBP25.24■■□□□ 1.63
HOXD8-203ENST00000450510 DCCP43146 1447 aa25.23■■□□□ 1.63
HOXD8-203ENST00000450510 KIF7Q2M1P5 1343 aa25.23■■□□□ 1.63
HOXD8-203ENST00000450510 ADGRL3Q9HAR2 1447 aa25.22■■□□□ 1.63
HOXD8-203ENST00000450510 CENPBP07199 599 aaPredicted RBP25.22■■□□□ 1.63
HOXD8-203ENST00000450510 C14orf37Q86TY3 774 aa25.21■■□□□ 1.63
HOXD8-203ENST00000450510 TRAK1Q9UPV9 953 aa25.21■■□□□ 1.63
HOXD8-203ENST00000450510 C11orf95C9JLR9 678 aaPredicted RBP25.2■■□□□ 1.62
HOXD8-203ENST00000450510 CCER2I3L3R5 266 aa25.2■■□□□ 1.62
HOXD8-203ENST00000450510 CADPS2Q86UW7 1296 aa25.2■■□□□ 1.62
HOXD8-203ENST00000450510 UBAP1LF5GYI3 381 aa25.19■■□□□ 1.62
HOXD8-203ENST00000450510 WAPLQ7Z5K2 1190 aa25.19■■□□□ 1.62
HOXD8-203ENST00000450510 PRAM1Q96QH2 718 aa25.17■■□□□ 1.62
HOXD8-203ENST00000450510 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.17■■□□□ 1.62
HOXD8-203ENST00000450510 ATF3P18847 181 aa25.16■■□□□ 1.62
HOXD8-203ENST00000450510 POGKQ9P215 609 aa25.16■■□□□ 1.62
HOXD8-203ENST00000450510 PLEKHH1Q9ULM0 1364 aa25.16■■□□□ 1.62
HOXD8-203ENST00000450510 ST20-MTHFSA0A0A6YYL1 179 aa25.15■■□□□ 1.62
HOXD8-203ENST00000450510 NALCNQ8IZF0 1738 aa25.15■■□□□ 1.62
HOXD8-203ENST00000450510 ARHGEF28Q8N1W1 1705 aaKnown RBP25.14■■□□□ 1.61
HOXD8-203ENST00000450510 SLAIN2Q9P270 581 aa25.12■■□□□ 1.61
HOXD8-203ENST00000450510 EIF3AQ14152 1382 aaKnown RBP25.11■■□□□ 1.61
HOXD8-203ENST00000450510 CDC42BPGQ6DT37 1551 aa25.1■■□□□ 1.61
HOXD8-203ENST00000450510 SLC24A1O60721 1099 aa25.08■■□□□ 1.61
HOXD8-203ENST00000450510 CENPJQ9HC77 1338 aaPredicted RBP25.08■■□□□ 1.6
HOXD8-203ENST00000450510 ADGRB2O60241 1585 aa25.07■■□□□ 1.6
HOXD8-203ENST00000450510 MST1RQ04912 1400 aa25.06■■□□□ 1.6
HOXD8-203ENST00000450510 SAFB2Q14151 953 aaKnown RBP eCLIP25.05■■□□□ 1.6
HOXD8-203ENST00000450510 SCAF1Q9H7N4 1312 aaKnown RBP25.05■■□□□ 1.6
HOXD8-203ENST00000450510 PIP4K2BP78356 416 aa25.03■■□□□ 1.6
HOXD8-203ENST00000450510 TESK2Q96S53 571 aa25.03■■□□□ 1.6
HOXD8-203ENST00000450510 WASLO00401 505 aaPredicted RBP25.01■■□□□ 1.59
HOXD8-203ENST00000450510 TMF1P82094 1093 aa25.01■■□□□ 1.59
HOXD8-203ENST00000450510 MINK1Q8N4C8 1332 aaPredicted RBP25.01■■□□□ 1.59
HOXD8-203ENST00000450510 SBNO2Q9Y2G9 1366 aa25.01■■□□□ 1.59
HOXD8-203ENST00000450510 C1orf167Q5SNV9 1468 aa25.01■■□□□ 1.59
HOXD8-203ENST00000450510 FMN2Q9NZ56 1722 aa24.99■■□□□ 1.59
HOXD8-203ENST00000450510 CDCA8Q53HL2 280 aa24.98■■□□□ 1.59
HOXD8-203ENST00000450510 YTHDC1Q96MU7 727 aaKnown RBP24.98■■□□□ 1.59
HOXD8-203ENST00000450510 ANKARQ7Z5J8 1434 aa24.97■■□□□ 1.59
HOXD8-203ENST00000450510 BRINP3Q76B58 766 aa24.96■■□□□ 1.59
HOXD8-203ENST00000450510 QRICH2Q9H0J4 1663 aa24.96■■□□□ 1.59
HOXD8-203ENST00000450510 ROBO1Q9Y6N7 1651 aa24.96■■□□□ 1.59
HOXD8-203ENST00000450510 KTN1Q86UP2 1357 aaKnown RBP24.95■■□□□ 1.59
HOXD8-203ENST00000450510 PRKRIP1Q9H875 184 aaPredicted RBP24.95■■□□□ 1.58
HOXD8-203ENST00000450510 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
HOXD8-203ENST00000450510 CDK19Q9BWU1 502 aa24.93■■□□□ 1.58
HOXD8-203ENST00000450510 TULP4Q9NRJ4 1543 aa24.92■■□□□ 1.58
HOXD8-203ENST00000450510 EVC2Q86UK5 1308 aa24.91■■□□□ 1.58
HOXD8-203ENST00000450510 POLR3GLQ9BT43 218 aa24.91■■□□□ 1.58
HOXD8-203ENST00000450510 ESCO1Q5FWF5 840 aa24.9■■□□□ 1.58
HOXD8-203ENST00000450510 ORAI2Q96SN7 254 aa24.9■■□□□ 1.58
HOXD8-203ENST00000450510 PUS7Q96PZ0 661 aaKnown RBP24.88■■□□□ 1.57
HOXD8-203ENST00000450510 AHDC1Q5TGY3 1603 aaPredicted RBP24.87■■□□□ 1.57
HOXD8-203ENST00000450510 USP32Q8NFA0 1604 aa24.87■■□□□ 1.57
HOXD8-203ENST00000450510 NUTM2FA1L443 756 aa24.87■■□□□ 1.57
HOXD8-203ENST00000450510 NUDT16Q96DE0 195 aaKnown RBP24.87■■□□□ 1.57
HOXD8-203ENST00000450510 PRR36Q9H6K5 1346 aa24.86■■□□□ 1.57
HOXD8-203ENST00000450510 CCDC61Q9Y6R9 512 aa24.86■■□□□ 1.57
HOXD8-203ENST00000450510 ATP7BP35670 1465 aa24.85■■□□□ 1.57
HOXD8-203ENST00000450510 HSPA1LP34931 641 aa24.85■■□□□ 1.57
HOXD8-203ENST00000450510 PHF8Q9UPP1 1060 aa24.85■■□□□ 1.57
HOXD8-203ENST00000450510 KIF1AQ12756 1690 aa24.85■■□□□ 1.57
HOXD8-203ENST00000450510 NHSL1Q5SYE7 1610 aa24.84■■□□□ 1.57
HOXD8-203ENST00000450510 SRPK2P78362 688 aaKnown RBP24.84■■□□□ 1.57
HOXD8-203ENST00000450510 RGPD8O14715 1765 aaPredicted RBP24.83■■□□□ 1.57
HOXD8-203ENST00000450510 NPHP3Q7Z494 1330 aa24.83■■□□□ 1.56
HOXD8-203ENST00000450510 ITSN1Q15811 1721 aa24.81■■□□□ 1.56
HOXD8-203ENST00000450510 PLEKHG3A1L390 1219 aa24.81■■□□□ 1.56
HOXD8-203ENST00000450510 CABP2Q9NPB3 220 aa24.81■■□□□ 1.56
HOXD8-203ENST00000450510 SOS2Q07890 1332 aaPredicted RBP24.81■■□□□ 1.56
HOXD8-203ENST00000450510 RALBP1Q15311 655 aa24.8■■□□□ 1.56
HOXD8-203ENST00000450510 ATAD2Q6PL18 1390 aa24.8■■□□□ 1.56
HOXD8-203ENST00000450510 PHLPP1O60346 1717 aa24.79■■□□□ 1.56
HOXD8-203ENST00000450510 FOXO3O43524 673 aa24.78■■□□□ 1.56
HOXD8-203ENST00000450510 TOPAZ1Q8N9V7 1692 aa24.78■■□□□ 1.56
HOXD8-203ENST00000450510 LRRC59Q96AG4 307 aaKnown RBP24.77■■□□□ 1.56
HOXD8-203ENST00000450510 MYOM1P52179 1685 aa24.77■■□□□ 1.56
HOXD8-203ENST00000450510 COL16A1Q07092 1604 aaPredicted RBP24.76■■□□□ 1.55
HOXD8-203ENST00000450510 ILDR2Q71H61 639 aa24.76■■□□□ 1.55
HOXD8-203ENST00000450510 POLR3AO14802 1390 aaPredicted RBP24.75■■□□□ 1.55
HOXD8-203ENST00000450510 PER1O15534 1290 aaPredicted RBP24.74■■□□□ 1.55
HOXD8-203ENST00000450510 PSME1Q06323 249 aa24.74■■□□□ 1.55
HOXD8-203ENST00000450510 PMFBP1Q8TBY8 1022 aa24.74■■□□□ 1.55
HOXD8-203ENST00000450510 PPIP5K1Q6PFW1 1433 aa24.74■■□□□ 1.55
HOXD8-203ENST00000450510 PXDNQ92626 1479 aa24.73■■□□□ 1.55
HOXD8-203ENST00000450510 NGDNQ8NEJ9 315 aaKnown RBP24.73■■□□□ 1.55
HOXD8-203ENST00000450510 DDX17Q92841 729 aaKnown RBP24.73■■□□□ 1.55
HOXD8-203ENST00000450510 PARD3Q8TEW0 1356 aa24.71■■□□□ 1.55
HOXD8-203ENST00000450510 JCADQ9P266 1359 aa24.71■■□□□ 1.55
HOXD8-203ENST00000450510 KRT28Q7Z3Y7 464 aa24.71■■□□□ 1.55
HOXD8-203ENST00000450510 MRS2Q9HD23 443 aa24.71■■□□□ 1.55
HOXD8-203ENST00000450510 CABP1Q9NZU7 370 aa24.71■■□□□ 1.55
HOXD8-203ENST00000450510 SBNO1A3KN83 1393 aa24.7■■□□□ 1.55
HOXD8-203ENST00000450510 NINLQ9Y2I6 1382 aa24.7■■□□□ 1.55
HOXD8-203ENST00000450510 ACEP12821 1306 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms