RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 DDX17Q92841 729 aaKnown RBP20.49■□□□□ 0.87
RTFDC1-204ENST00000449062 PHLPP1O60346 1717 aa20.48■□□□□ 0.87
RTFDC1-204ENST00000449062 SIN3AQ96ST3 1273 aa20.47■□□□□ 0.87
RTFDC1-204ENST00000449062 PRAM1Q96QH2 718 aa20.46■□□□□ 0.87
RTFDC1-204ENST00000449062 KNDC1Q76NI1 1749 aa20.45■□□□□ 0.86
RTFDC1-204ENST00000449062 LAMC1P11047 1609 aa20.45■□□□□ 0.86
RTFDC1-204ENST00000449062 L3MBTL2Q969R5 705 aa20.44■□□□□ 0.86
RTFDC1-204ENST00000449062 LRRC59Q96AG4 307 aaKnown RBP20.44■□□□□ 0.86
RTFDC1-204ENST00000449062 TRAK1Q9UPV9 953 aa20.44■□□□□ 0.86
RTFDC1-204ENST00000449062 SOS2Q07890 1332 aaPredicted RBP20.44■□□□□ 0.86
RTFDC1-204ENST00000449062 DLC1Q96QB1 1528 aa20.43■□□□□ 0.86
RTFDC1-204ENST00000449062 CDC42BPGQ6DT37 1551 aa20.43■□□□□ 0.86
RTFDC1-204ENST00000449062 ESCO1Q5FWF5 840 aa20.42■□□□□ 0.86
RTFDC1-204ENST00000449062 SPATA31A6Q5VVP1 1343 aa20.42■□□□□ 0.86
RTFDC1-204ENST00000449062 NUTM2FA1L443 756 aa20.4■□□□□ 0.86
RTFDC1-204ENST00000449062 SAFB2Q14151 953 aaKnown RBP eCLIP20.4■□□□□ 0.86
RTFDC1-204ENST00000449062 NBPF1Q3BBV0 1214 aa20.4■□□□□ 0.86
RTFDC1-204ENST00000449062 NHSL1Q5SYE7 1610 aa20.4■□□□□ 0.86
RTFDC1-204ENST00000449062 PHF23Q9BUL5 403 aaPredicted RBP20.4■□□□□ 0.86
RTFDC1-204ENST00000449062 POGKQ9P215 609 aa20.4■□□□□ 0.86
RTFDC1-204ENST00000449062 FOXO3O43524 673 aa20.37■□□□□ 0.85
RTFDC1-204ENST00000449062 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
RTFDC1-204ENST00000449062 LRP6O75581 1613 aa20.37■□□□□ 0.85
RTFDC1-204ENST00000449062 SOCS7O14512 581 aa20.36■□□□□ 0.85
RTFDC1-204ENST00000449062 PNPLA6Q8IY17 1366 aa20.35■□□□□ 0.85
RTFDC1-204ENST00000449062 POTEAQ6S8J7 498 aa20.35■□□□□ 0.85
RTFDC1-204ENST00000449062 NPHP3Q7Z494 1330 aa20.34■□□□□ 0.85
RTFDC1-204ENST00000449062 SHPRHQ149N8 1683 aa20.34■□□□□ 0.85
RTFDC1-204ENST00000449062 HIRIP3Q9BW71 556 aaPredicted RBP20.33■□□□□ 0.85
RTFDC1-204ENST00000449062 FMN2Q9NZ56 1722 aa20.33■□□□□ 0.84
RTFDC1-204ENST00000449062 MINK1Q8N4C8 1332 aaPredicted RBP20.32■□□□□ 0.84
RTFDC1-204ENST00000449062 PXDNQ92626 1479 aa20.31■□□□□ 0.84
RTFDC1-204ENST00000449062 WASLO00401 505 aaPredicted RBP20.31■□□□□ 0.84
RTFDC1-204ENST00000449062 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
RTFDC1-204ENST00000449062 NUTM2BA6NNL0 878 aaPredicted RBP20.3■□□□□ 0.84
RTFDC1-204ENST00000449062 NUTM2EB1AL46 878 aaPredicted RBP20.3■□□□□ 0.84
RTFDC1-204ENST00000449062 XPCQ01831 940 aaPredicted RBP20.3■□□□□ 0.84
RTFDC1-204ENST00000449062 NUTM2AQ8IVF1 878 aaPredicted RBP20.3■□□□□ 0.84
RTFDC1-204ENST00000449062 KIAA1210Q9ULL0 1709 aa20.3■□□□□ 0.84
RTFDC1-204ENST00000449062 PRR36Q9H6K5 1346 aa20.29■□□□□ 0.84
RTFDC1-204ENST00000449062 ADGRB2O60241 1585 aa20.29■□□□□ 0.84
RTFDC1-204ENST00000449062 ANKARQ7Z5J8 1434 aa20.28■□□□□ 0.84
RTFDC1-204ENST00000449062 NBPF8Q3BBV2 869 aa20.28■□□□□ 0.84
RTFDC1-204ENST00000449062 KRT28Q7Z3Y7 464 aa20.27■□□□□ 0.84
RTFDC1-204ENST00000449062 SPATA31A3Q5VYP0 1347 aa20.26■□□□□ 0.83
RTFDC1-204ENST00000449062 MEX3CQ5U5Q3 659 aaKnown RBP20.24■□□□□ 0.83
RTFDC1-204ENST00000449062 PMFBP1Q8TBY8 1022 aa20.24■□□□□ 0.83
RTFDC1-204ENST00000449062 CDK19Q9BWU1 502 aa20.24■□□□□ 0.83
RTFDC1-204ENST00000449062 USP32Q8NFA0 1604 aa20.24■□□□□ 0.83
RTFDC1-204ENST00000449062 ARHGEF28Q8N1W1 1705 aaKnown RBP20.23■□□□□ 0.83
RTFDC1-204ENST00000449062 RGPD8O14715 1765 aaPredicted RBP20.22■□□□□ 0.83
RTFDC1-204ENST00000449062 ZNF772Q68DY9 489 aaPredicted RBP20.22■□□□□ 0.83
RTFDC1-204ENST00000449062 NUDT16Q96DE0 195 aaKnown RBP20.22■□□□□ 0.83
RTFDC1-204ENST00000449062 PSME1Q06323 249 aa20.21■□□□□ 0.83
RTFDC1-204ENST00000449062 EIF3AQ14152 1382 aaKnown RBP20.21■□□□□ 0.83
RTFDC1-204ENST00000449062 ADAMTS2O95450 1211 aa20.2■□□□□ 0.82
RTFDC1-204ENST00000449062 TULP4Q9NRJ4 1543 aa20.2■□□□□ 0.82
RTFDC1-204ENST00000449062 AFF2P51816 1311 aa20.2■□□□□ 0.82
RTFDC1-204ENST00000449062 CENPJQ9HC77 1338 aaPredicted RBP20.2■□□□□ 0.82
RTFDC1-204ENST00000449062 KIF1AQ12756 1690 aa20.19■□□□□ 0.82
RTFDC1-204ENST00000449062 SBNO1A3KN83 1393 aa20.19■□□□□ 0.82
RTFDC1-204ENST00000449062 GPRASP1Q5JY77 1395 aa20.19■□□□□ 0.82
RTFDC1-204ENST00000449062 COL22A1Q8NFW1 1626 aaPredicted RBP20.18■□□□□ 0.82
RTFDC1-204ENST00000449062 FNBP4Q8N3X1 1017 aaPredicted RBP20.18■□□□□ 0.82
RTFDC1-204ENST00000449062 C8orf37Q96NL8 207 aa20.18■□□□□ 0.82
RTFDC1-204ENST00000449062 PLEKHG3A1L390 1219 aa20.16■□□□□ 0.82
RTFDC1-204ENST00000449062 NGLY1Q96IV0 654 aa20.16■□□□□ 0.82
RTFDC1-204ENST00000449062 CCDC61Q9Y6R9 512 aa20.16■□□□□ 0.82
RTFDC1-204ENST00000449062 ATP7BP35670 1465 aa20.16■□□□□ 0.82
RTFDC1-204ENST00000449062 TRPM1Q7Z4N2 1603 aa20.15■□□□□ 0.82
RTFDC1-204ENST00000449062 ROCK2O75116 1388 aaKnown RBP20.14■□□□□ 0.81
RTFDC1-204ENST00000449062 TNS3Q68CZ2 1445 aa20.13■□□□□ 0.81
RTFDC1-204ENST00000449062 TONSLQ96HA7 1378 aa20.13■□□□□ 0.81
RTFDC1-204ENST00000449062 NGDNQ8NEJ9 315 aaKnown RBP20.13■□□□□ 0.81
RTFDC1-204ENST00000449062 PCGF6Q9BYE7 350 aa20.13■□□□□ 0.81
RTFDC1-204ENST00000449062 QTRT2Q9H974 415 aaKnown RBP20.13■□□□□ 0.81
RTFDC1-204ENST00000449062 CABLES1Q8TDN4 633 aa20.12■□□□□ 0.81
RTFDC1-204ENST00000449062 POLR3AO14802 1390 aaPredicted RBP20.11■□□□□ 0.81
RTFDC1-204ENST00000449062 RXRBP28702 533 aa20.11■□□□□ 0.81
RTFDC1-204ENST00000449062 CABP2Q9NPB3 220 aa20.11■□□□□ 0.81
RTFDC1-204ENST00000449062 ARHGEF10O15013 1369 aa20.09■□□□□ 0.81
RTFDC1-204ENST00000449062 ACEP12821 1306 aa20.09■□□□□ 0.81
RTFDC1-204ENST00000449062 BCL9LQ86UU0 1499 aa20.08■□□□□ 0.81
RTFDC1-204ENST00000449062 SRPK2P78362 688 aaKnown RBP20.08■□□□□ 0.81
RTFDC1-204ENST00000449062 CARD11Q9BXL7 1154 aa20.08■□□□□ 0.81
RTFDC1-204ENST00000449062 USP21Q9UK80 565 aa20.08■□□□□ 0.81
RTFDC1-204ENST00000449062 RBM6P78332 1123 aaKnown RBP20.07■□□□□ 0.8
RTFDC1-204ENST00000449062 LMOD2Q6P5Q4 547 aa20.07■□□□□ 0.8
RTFDC1-204ENST00000449062 TRPM3Q9HCF6 1732 aaPredicted RBP20.06■□□□□ 0.8
RTFDC1-204ENST00000449062 RALGAPBQ86X10 1494 aa20.05■□□□□ 0.8
RTFDC1-204ENST00000449062 EVC2Q86UK5 1308 aa20.05■□□□□ 0.8
RTFDC1-204ENST00000449062 CLSPNQ9HAW4 1339 aa20.05■□□□□ 0.8
RTFDC1-204ENST00000449062 CABP1Q9NZU7 370 aa20.05■□□□□ 0.8
RTFDC1-204ENST00000449062 FAM83GA6ND36 823 aa20.04■□□□□ 0.8
RTFDC1-204ENST00000449062 TRPC5Q9UL62 973 aaPredicted RBP20.04■□□□□ 0.8
RTFDC1-204ENST00000449062 ATRNO75882 1429 aa20.03■□□□□ 0.8
RTFDC1-204ENST00000449062 SLIT2O94813 1529 aa20.03■□□□□ 0.8
RTFDC1-204ENST00000449062 TIMELESSQ9UNS1 1208 aa20.03■□□□□ 0.8
RTFDC1-204ENST00000449062 CDK12Q9NYV4 1490 aaPredicted RBP20.03■□□□□ 0.8
RTFDC1-204ENST00000449062 PAK3O75914 559 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms