RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 RPGRIP1LQ68CZ1 1315 aa19.45■□□□□ 0.7
SF1-211ENST00000448404 MYO5BQ9ULV0 1848 aa19.45■□□□□ 0.7
SF1-211ENST00000448404 EVC2Q86UK5 1308 aa19.44■□□□□ 0.7
SF1-211ENST00000448404 GLI2P10070 1586 aa19.44■□□□□ 0.7
SF1-211ENST00000448404 FANCIQ9NVI1 1328 aa19.44■□□□□ 0.7
SF1-211ENST00000448404 PAK3O75914 559 aaPredicted RBP19.44■□□□□ 0.7
SF1-211ENST00000448404 BCL2L13Q9BXK5 485 aa19.44■□□□□ 0.7
SF1-211ENST00000448404 TULP4Q9NRJ4 1543 aa19.43■□□□□ 0.7
SF1-211ENST00000448404 NPC1L1Q9UHC9 1359 aa19.43■□□□□ 0.7
SF1-211ENST00000448404 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
SF1-211ENST00000448404 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
SF1-211ENST00000448404 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
SF1-211ENST00000448404 NEURL4Q96JN8 1562 aa19.43■□□□□ 0.7
SF1-211ENST00000448404 PIK3C2BO00750 1634 aa19.43■□□□□ 0.7
SF1-211ENST00000448404 SLC52A1Q9NWF4 448 aa19.43■□□□□ 0.7
SF1-211ENST00000448404 SBNO2Q9Y2G9 1366 aa19.42■□□□□ 0.7
SF1-211ENST00000448404 WWC1Q8IX03 1113 aa19.41■□□□□ 0.7
SF1-211ENST00000448404 TCP11L2Q8N4U5 519 aa19.41■□□□□ 0.7
SF1-211ENST00000448404 TNNQ9UQP3 1299 aa19.4■□□□□ 0.7
SF1-211ENST00000448404 CGNL1Q0VF96 1302 aa19.4■□□□□ 0.7
SF1-211ENST00000448404 NCKAP5LQ9HCH0 1330 aa19.4■□□□□ 0.7
SF1-211ENST00000448404 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.4■□□□□ 0.7
SF1-211ENST00000448404 U2AF1L5P0DN76 240 aaPredicted RBP19.39■□□□□ 0.7
SF1-211ENST00000448404 U2AF1Q01081 240 aaKnown RBP eCLIP19.39■□□□□ 0.74e-10■■■■■ 47.9
SF1-211ENST00000448404 A0A1W2PP64 1363 aa19.39■□□□□ 0.7
SF1-211ENST00000448404 SETBP1Q9Y6X0 1596 aa19.39■□□□□ 0.7
SF1-211ENST00000448404 U2SURPO15042 1029 aaKnown RBP19.38■□□□□ 0.69
SF1-211ENST00000448404 PPM1GO15355 546 aaPredicted RBP19.38■□□□□ 0.69
SF1-211ENST00000448404 ERICH6Q7L0X2 663 aa19.38■□□□□ 0.69
SF1-211ENST00000448404 CABP1Q9NZU7 370 aa19.38■□□□□ 0.69
SF1-211ENST00000448404 FRAT1Q92837 279 aaPredicted RBP19.37■□□□□ 0.69
SF1-211ENST00000448404 MYO3AQ8NEV4 1616 aa19.37■□□□□ 0.69
SF1-211ENST00000448404 CDK19Q9BWU1 502 aa19.36■□□□□ 0.69
SF1-211ENST00000448404 SLC24A1O60721 1099 aa19.36■□□□□ 0.69
SF1-211ENST00000448404 PANK1Q8TE04 598 aa19.36■□□□□ 0.69
SF1-211ENST00000448404 ARHGAP31Q2M1Z3 1444 aa19.35■□□□□ 0.69
SF1-211ENST00000448404 ARHGEF28Q8N1W1 1705 aaKnown RBP19.34■□□□□ 0.69
SF1-211ENST00000448404 TRMT2AQ8IZ69 625 aaKnown RBP19.34■□□□□ 0.69
SF1-211ENST00000448404 NUTM2FA1L443 756 aa19.34■□□□□ 0.69
SF1-211ENST00000448404 POLR3AO14802 1390 aaPredicted RBP19.34■□□□□ 0.69
SF1-211ENST00000448404 INSRP06213 1382 aa19.34■□□□□ 0.69
SF1-211ENST00000448404 DIP2BQ9P265 1576 aa19.34■□□□□ 0.69
SF1-211ENST00000448404 ZC3H13Q5T200 1668 aaKnown RBP19.34■□□□□ 0.69
SF1-211ENST00000448404 FYB1O15117 783 aa19.33■□□□□ 0.69
SF1-211ENST00000448404 YTHDC2Q9H6S0 1430 aaKnown RBP19.33■□□□□ 0.68
SF1-211ENST00000448404 TXNDC2Q86VQ3 553 aa19.33■□□□□ 0.68
SF1-211ENST00000448404 PREX1Q8TCU6 1659 aa19.33■□□□□ 0.68
SF1-211ENST00000448404 ANKRD36BQ8N2N9 1353 aa19.33■□□□□ 0.68
SF1-211ENST00000448404 PRKCSHP14314 528 aaPredicted RBP19.32■□□□□ 0.68
SF1-211ENST00000448404 PDE4AP27815 886 aa19.32■□□□□ 0.68
SF1-211ENST00000448404 ZRANB1Q9UGI0 708 aa19.32■□□□□ 0.68
SF1-211ENST00000448404 TMEM131LA2VDJ0 1609 aa19.32■□□□□ 0.68
SF1-211ENST00000448404 RGS3P49796 1198 aa19.32■□□□□ 0.68
SF1-211ENST00000448404 TSR2Q969E8 191 aaKnown RBP19.32■□□□□ 0.68
SF1-211ENST00000448404 CLUAP1Q96AJ1 413 aa19.32■□□□□ 0.68
SF1-211ENST00000448404 E9PSI1 815 aa19.31■□□□□ 0.68
SF1-211ENST00000448404 RUNDC1Q96C34 613 aa19.31■□□□□ 0.68
SF1-211ENST00000448404 COG6Q9Y2V7 657 aa19.31■□□□□ 0.68
SF1-211ENST00000448404 PTPRMP28827 1452 aa19.3■□□□□ 0.68
SF1-211ENST00000448404 CEBPAP49715 358 aaPredicted RBP19.3■□□□□ 0.68
SF1-211ENST00000448404 NBR1Q14596 966 aa19.29■□□□□ 0.68
SF1-211ENST00000448404 CANXP27824 592 aaKnown RBP19.29■□□□□ 0.68
SF1-211ENST00000448404 NKTRP30414 1462 aaKnown RBP19.29■□□□□ 0.68
SF1-211ENST00000448404 CFAP53Q96M91 514 aa19.27■□□□□ 0.68
SF1-211ENST00000448404 SHPRHQ149N8 1683 aa19.27■□□□□ 0.67
SF1-211ENST00000448404 ESF1Q9H501 851 aaKnown RBP19.27■□□□□ 0.67
SF1-211ENST00000448404 CLTCQ00610 1675 aaKnown RBP19.26■□□□□ 0.67
SF1-211ENST00000448404 IGHDP01880 384 aa19.26■□□□□ 0.67
SF1-211ENST00000448404 RLBP1P12271 317 aa19.26■□□□□ 0.67
SF1-211ENST00000448404 METP08581 1390 aa19.25■□□□□ 0.67
SF1-211ENST00000448404 ALKQ9UM73 1620 aa19.24■□□□□ 0.67
SF1-211ENST00000448404 ANP32AP39687 249 aaKnown RBP19.24■□□□□ 0.67
SF1-211ENST00000448404 NOP58Q9Y2X3 529 aaKnown RBP19.24■□□□□ 0.67
SF1-211ENST00000448404 KDM2BQ8NHM5 1336 aa19.24■□□□□ 0.67
SF1-211ENST00000448404 CD163L1Q9NR16 1453 aa19.24■□□□□ 0.67
SF1-211ENST00000448404 TCERG1O14776 1098 aaKnown RBP19.24■□□□□ 0.67
SF1-211ENST00000448404 BACH2Q9BYV9 841 aa19.23■□□□□ 0.67
SF1-211ENST00000448404 TERF2IPQ9NYB0 399 aa19.23■□□□□ 0.67
SF1-211ENST00000448404 RIMS2Q9UQ26 1411 aa19.23■□□□□ 0.67
SF1-211ENST00000448404 A2ML1A8K2U0 1454 aa19.23■□□□□ 0.67
SF1-211ENST00000448404 HMOX1P09601 288 aa19.22■□□□□ 0.67
SF1-211ENST00000448404 NME9Q86XW9 330 aa19.22■□□□□ 0.67
SF1-211ENST00000448404 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.22■□□□□ 0.67
SF1-211ENST00000448404 ABCC11Q96J66 1382 aa19.22■□□□□ 0.67
SF1-211ENST00000448404 ZFYVE9O95405 1425 aa19.21■□□□□ 0.67
SF1-211ENST00000448404 EMILIN1Q9Y6C2 1016 aa19.21■□□□□ 0.67
SF1-211ENST00000448404 ZMYM3Q14202 1370 aa19.21■□□□□ 0.67
SF1-211ENST00000448404 RARSP54136 660 aaKnown RBP19.21■□□□□ 0.67
SF1-211ENST00000448404 THUMPD2Q9BTF0 503 aaKnown RBP19.21■□□□□ 0.67
SF1-211ENST00000448404 SOX12O15370 315 aa19.2■□□□□ 0.66
SF1-211ENST00000448404 DEKP35659 375 aaKnown RBP19.2■□□□□ 0.66
SF1-211ENST00000448404 HDGFL2Q7Z4V5 671 aaPredicted RBP19.2■□□□□ 0.66
SF1-211ENST00000448404 IPO9Q96P70 1041 aaKnown RBP19.2■□□□□ 0.66
SF1-211ENST00000448404 SLC4A3P48751 1232 aa19.19■□□□□ 0.66
SF1-211ENST00000448404 RRS1Q15050 365 aaKnown RBP19.18■□□□□ 0.66
SF1-211ENST00000448404 SLC26A8Q96RN1 970 aa19.18■□□□□ 0.66
SF1-211ENST00000448404 LAS1LQ9Y4W2 734 aaKnown RBP19.17■□□□□ 0.66
SF1-211ENST00000448404 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
SF1-211ENST00000448404 EXOSC9Q06265 439 aaKnown RBP19.17■□□□□ 0.66
SF1-211ENST00000448404 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms