RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 EYA1Q99502 592 aa3.48□□□□□ -1.85
SNHG3-203ENST00000447507 SPOCK3Q9BQ16 436 aa3.48□□□□□ -1.85
SNHG3-203ENST00000447507 ARID1BQ8NFD5 2236 aaPredicted RBP3.48□□□□□ -1.85
SNHG3-203ENST00000447507 COBLO75128 1261 aa3.47□□□□□ -1.85
SNHG3-203ENST00000447507 IRS1P35568 1242 aa3.47□□□□□ -1.85
SNHG3-203ENST00000447507 MLLT3P42568 568 aaPredicted RBP3.47□□□□□ -1.85
SNHG3-203ENST00000447507 RBM46Q8TBY0 533 aaKnown RBP3.47□□□□□ -1.85
SNHG3-203ENST00000447507 ARHGEF1Q92888 912 aaKnown RBP3.47□□□□□ -1.85
SNHG3-203ENST00000447507 RTN4Q9NQC3 1192 aaKnown RBP3.47□□□□□ -1.85
SNHG3-203ENST00000447507 TLL1O43897 1013 aa3.46□□□□□ -1.86
SNHG3-203ENST00000447507 SLURP2P0DP57 97 aa3.46□□□□□ -1.86
SNHG3-203ENST00000447507 PTGDRQ13258 359 aa3.46□□□□□ -1.86
SNHG3-203ENST00000447507 KMT5BQ4FZB7 885 aa3.46□□□□□ -1.86
SNHG3-203ENST00000447507 BLOC1S3Q6QNY0 202 aa3.46□□□□□ -1.86
SNHG3-203ENST00000447507 KCNV2Q8TDN2 545 aa3.46□□□□□ -1.86
SNHG3-203ENST00000447507 TMEM134Q9H6X4 195 aa3.46□□□□□ -1.86
SNHG3-203ENST00000447507 ACTN4O43707 911 aaKnown RBP3.45□□□□□ -1.86
SNHG3-203ENST00000447507 PROCP04070 461 aa3.45□□□□□ -1.86
SNHG3-203ENST00000447507 CFHP08603 1231 aa3.45□□□□□ -1.86
SNHG3-203ENST00000447507 CYP4X1Q8N118 509 aa3.45□□□□□ -1.86
SNHG3-203ENST00000447507 ADGRG1Q9Y653 693 aa3.45□□□□□ -1.86
SNHG3-203ENST00000447507 NUTM2FA1L443 756 aa3.44□□□□□ -1.86
SNHG3-203ENST00000447507 RCCD1A6NED2 376 aa3.44□□□□□ -1.86
SNHG3-203ENST00000447507 VEGFBP49765 207 aa3.44□□□□□ -1.86
SNHG3-203ENST00000447507 FOXC1Q12948 553 aa3.44□□□□□ -1.86
SNHG3-203ENST00000447507 PLA2G4EQ3MJ16 856 aa3.44□□□□□ -1.86
SNHG3-203ENST00000447507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.43□□□□□ -1.86
SNHG3-203ENST00000447507 FCHSD2O94868 740 aa3.43□□□□□ -1.86
SNHG3-203ENST00000447507 S1PR4O95977 384 aa3.43□□□□□ -1.86
SNHG3-203ENST00000447507 ADH1BP00325 375 aa3.43□□□□□ -1.86
SNHG3-203ENST00000447507 P3H3Q8IVL6 736 aa3.43□□□□□ -1.86
SNHG3-203ENST00000447507 TSHZ2Q9NRE2 1034 aa3.43□□□□□ -1.86
SNHG3-203ENST00000447507 NR1I2O75469 434 aa3.42□□□□□ -1.86
SNHG3-203ENST00000447507 FAM161AQ3B820 660 aa3.42□□□□□ -1.86
SNHG3-203ENST00000447507 PPEF1O14829 653 aaPredicted RBP3.41□□□□□ -1.86
SNHG3-203ENST00000447507 OATP04181 439 aa3.41□□□□□ -1.86
SNHG3-203ENST00000447507 SLC10A3P09131 477 aa3.41□□□□□ -1.86
SNHG3-203ENST00000447507 GALNT6Q8NCL4 622 aa3.41□□□□□ -1.86
SNHG3-203ENST00000447507 PXYLP1Q8TE99 480 aa3.41□□□□□ -1.86
SNHG3-203ENST00000447507 SLC6A16Q9GZN6 736 aa3.41□□□□□ -1.86
SNHG3-203ENST00000447507 ITGB2P05107 769 aa3.4□□□□□ -1.87
SNHG3-203ENST00000447507 HIC1Q14526 733 aa3.4□□□□□ -1.87
SNHG3-203ENST00000447507 RSPH4AQ5TD94 716 aa3.4□□□□□ -1.87
SNHG3-203ENST00000447507 SCARF2Q96GP6 870 aaPredicted RBP3.4□□□□□ -1.87
SNHG3-203ENST00000447507 SEMA3EO15041 775 aa3.39□□□□□ -1.87
SNHG3-203ENST00000447507 METTL3Q86U44 580 aaKnown RBP3.39□□□□□ -1.87
SNHG3-203ENST00000447507 YBX3P16989 372 aaKnown RBP eCLIP3.38□□□□□ -1.87
SNHG3-203ENST00000447507 PUS10Q3MIT2 529 aaKnown RBP3.38□□□□□ -1.87
SNHG3-203ENST00000447507 PLA2G2CQ5R387 149 aa3.38□□□□□ -1.87
SNHG3-203ENST00000447507 SCUBE3Q8IX30 993 aa3.38□□□□□ -1.87
SNHG3-203ENST00000447507 SPSB2Q99619 263 aa3.38□□□□□ -1.87
SNHG3-203ENST00000447507 GNPATO15228 680 aa3.37□□□□□ -1.87
SNHG3-203ENST00000447507 SMPD1P17405 629 aa3.37□□□□□ -1.87
SNHG3-203ENST00000447507 SMYD5Q6GMV2 418 aa3.37□□□□□ -1.87
SNHG3-203ENST00000447507 RDH13Q8NBN7 331 aa3.37□□□□□ -1.87
SNHG3-203ENST00000447507 TTC24A2A3L6 582 aaPredicted RBP3.36□□□□□ -1.87
SNHG3-203ENST00000447507 TESPA1A2RU30 521 aaPredicted RBP3.36□□□□□ -1.87
SNHG3-203ENST00000447507 DDX11L8A8MPP1 907 aa3.36□□□□□ -1.87
SNHG3-203ENST00000447507 FMNL1O95466 1100 aaPredicted RBP3.36□□□□□ -1.87
SNHG3-203ENST00000447507 RPIAP49247 311 aa3.36□□□□□ -1.87
SNHG3-203ENST00000447507 FUT2Q10981 343 aa3.36□□□□□ -1.87
SNHG3-203ENST00000447507 MORN1Q5T089 497 aa3.36□□□□□ -1.87
SNHG3-203ENST00000447507 SULF1Q8IWU6 871 aa3.36□□□□□ -1.87
SNHG3-203ENST00000447507 DAXXQ9UER7 740 aaPredicted RBP3.36□□□□□ -1.87
SNHG3-203ENST00000447507 FCF1Q9Y324 198 aaKnown RBP3.36□□□□□ -1.87
SNHG3-203ENST00000447507 GPR37O15354 613 aa3.35□□□□□ -1.87
SNHG3-203ENST00000447507 ATP6V1AP38606 617 aa3.35□□□□□ -1.87
SNHG3-203ENST00000447507 BAG6P46379 1132 aa3.35□□□□□ -1.87
SNHG3-203ENST00000447507 RBM26Q5T8P6 1007 aaKnown RBP3.35□□□□□ -1.87
SNHG3-203ENST00000447507 THAP11Q96EK4 314 aa3.35□□□□□ -1.87
SNHG3-203ENST00000447507 ARHGEF15O94989 841 aa3.34□□□□□ -1.87
SNHG3-203ENST00000447507 CD2BP2O95400 341 aaKnown RBP3.34□□□□□ -1.87
SNHG3-203ENST00000447507 FECHP22830 423 aa3.34□□□□□ -1.87
SNHG3-203ENST00000447507 GCGRP47871 477 aa3.34□□□□□ -1.87
SNHG3-203ENST00000447507 MARSP56192 900 aaKnown RBP3.34□□□□□ -1.87
SNHG3-203ENST00000447507 MSS51Q4VC12 460 aa3.34□□□□□ -1.87
SNHG3-203ENST00000447507 ZNF385CQ66K41 422 aaPredicted RBP3.34□□□□□ -1.87
SNHG3-203ENST00000447507 NLRP7Q8WX94 980 aa3.34□□□□□ -1.87
SNHG3-203ENST00000447507 DCAF5Q96JK2 942 aa3.34□□□□□ -1.87
SNHG3-203ENST00000447507 PRDM9Q9NQV7 894 aa3.34□□□□□ -1.87
SNHG3-203ENST00000447507 SLC27A5Q9Y2P5 690 aa3.34□□□□□ -1.87
SNHG3-203ENST00000447507 SALL2Q9Y467 1007 aaPredicted RBP3.34□□□□□ -1.87
SNHG3-203ENST00000447507 ZBTB24O43167 697 aaPredicted RBP3.33□□□□□ -1.88
SNHG3-203ENST00000447507 GRIPAP1Q4V328 841 aa3.33□□□□□ -1.88
SNHG3-203ENST00000447507 GPIHBP1Q8IV16 184 aa3.33□□□□□ -1.88
SNHG3-203ENST00000447507 FAM160A2Q8N612 972 aaPredicted RBP3.33□□□□□ -1.88
SNHG3-203ENST00000447507 Q3C1V9 767 aa3.32□□□□□ -1.88
SNHG3-203ENST00000447507 BRICD5Q6PL45 260 aa3.32□□□□□ -1.88
SNHG3-203ENST00000447507 RNF19BQ6ZMZ0 732 aa3.32□□□□□ -1.88
SNHG3-203ENST00000447507 SNIP1Q8TAD8 396 aaKnown RBP3.32□□□□□ -1.88
SNHG3-203ENST00000447507 PHOX2BQ99453 314 aa3.32□□□□□ -1.88
SNHG3-203ENST00000447507 WNT7AO00755 349 aa3.31□□□□□ -1.88
SNHG3-203ENST00000447507 TRIM32Q13049 653 aa3.31□□□□□ -1.88
SNHG3-203ENST00000447507 SVOPQ8N4V2 548 aa3.31□□□□□ -1.88
SNHG3-203ENST00000447507 CD46P15529 392 aa3.3□□□□□ -1.88
SNHG3-203ENST00000447507 MMP16P51512 607 aa3.3□□□□□ -1.88
SNHG3-203ENST00000447507 PLCB2Q00722 1185 aa3.3□□□□□ -1.88
SNHG3-203ENST00000447507 FZD5Q13467 585 aa3.3□□□□□ -1.88
SNHG3-203ENST00000447507 REPIN1Q9BWE0 567 aaKnown RBP3.3□□□□□ -1.88
SNHG3-203ENST00000447507 KDM4AO75164 1064 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms