RNA–Protein interactions for RNA: ENST00000445537.6

PTPRO-204, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRO, Length 4,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-204ENST00000445537 CAMSAP1Q5T5Y3 1602 aa6.95□□□□□ -1.3
PTPRO-204ENST00000445537 CC2D1BQ5T0F9 858 aaKnown RBP6.95□□□□□ -1.3
PTPRO-204ENST00000445537 DNMT1P26358 1616 aaKnown RBP6.95□□□□□ -1.3
PTPRO-204ENST00000445537 C1orf141Q5JVX7 400 aa6.95□□□□□ -1.3
PTPRO-204ENST00000445537 ZNF330Q9Y3S2 320 aaPredicted RBP6.95□□□□□ -1.3
PTPRO-204ENST00000445537 PIK3R4Q99570 1358 aa6.95□□□□□ -1.3
PTPRO-204ENST00000445537 PTPRTO14522 1441 aa6.95□□□□□ -1.3
PTPRO-204ENST00000445537 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
PTPRO-204ENST00000445537 ARHGAP31Q2M1Z3 1444 aa6.95□□□□□ -1.3
PTPRO-204ENST00000445537 NBPF1Q3BBV0 1214 aa6.94□□□□□ -1.3
PTPRO-204ENST00000445537 ADGRL2O95490 1459 aa6.94□□□□□ -1.3
PTPRO-204ENST00000445537 CDC42BPAQ5VT25 1732 aa6.94□□□□□ -1.3
PTPRO-204ENST00000445537 ADGBQ8N7X0 1667 aa6.94□□□□□ -1.3
PTPRO-204ENST00000445537 DDX10Q13206 875 aaKnown RBP6.94□□□□□ -1.3
PTPRO-204ENST00000445537 NBPF8Q3BBV2 869 aa6.94□□□□□ -1.3
PTPRO-204ENST00000445537 NBPF14Q5TI25 921 aa6.94□□□□□ -1.3
PTPRO-204ENST00000445537 TMX4Q9H1E5 349 aaPredicted RBP6.94□□□□□ -1.3
PTPRO-204ENST00000445537 ABCC3O15438 1527 aa6.93□□□□□ -1.3
PTPRO-204ENST00000445537 EXOC5O00471 708 aa6.93□□□□□ -1.3
PTPRO-204ENST00000445537 DDX54Q8TDD1 881 aaKnown RBP6.93□□□□□ -1.3
PTPRO-204ENST00000445537 MAPK8IP2Q13387 824 aaPredicted RBP6.93□□□□□ -1.3
PTPRO-204ENST00000445537 FER1L4A9Z1Z3 1794 aa6.93□□□□□ -1.3
PTPRO-204ENST00000445537 KTN1Q86UP2 1357 aaKnown RBP6.93□□□□□ -1.3
PTPRO-204ENST00000445537 JCADQ9P266 1359 aa6.93□□□□□ -1.3
PTPRO-204ENST00000445537 KDM5CP41229 1560 aa6.92□□□□□ -1.3
PTPRO-204ENST00000445537 TATP17735 454 aaPredicted RBP6.92□□□□□ -1.3
PTPRO-204ENST00000445537 BAG6P46379 1132 aa6.92□□□□□ -1.3
PTPRO-204ENST00000445537 CABLES1Q8TDN4 633 aa6.92□□□□□ -1.3
PTPRO-204ENST00000445537 HSPA5P11021 654 aaKnown RBP6.92□□□□□ -1.3
PTPRO-204ENST00000445537 SMG6Q86US8 1419 aaKnown RBP6.92□□□□□ -1.3
PTPRO-204ENST00000445537 CDC42BPBQ9Y5S2 1711 aa6.92□□□□□ -1.3
PTPRO-204ENST00000445537 CHRNA2Q15822 529 aa6.92□□□□□ -1.3
PTPRO-204ENST00000445537 BCL11BQ9C0K0 894 aaPredicted RBP6.91□□□□□ -1.3
PTPRO-204ENST00000445537 MAST1Q9Y2H9 1570 aa6.91□□□□□ -1.3
PTPRO-204ENST00000445537 DDX17Q92841 729 aaKnown RBP6.91□□□□□ -1.3
PTPRO-204ENST00000445537 BTG4Q9NY30 223 aa6.91□□□□□ -1.3
PTPRO-204ENST00000445537 ARHGEF10O15013 1369 aa6.91□□□□□ -1.3
PTPRO-204ENST00000445537 GTF2E1P29083 439 aaPredicted RBP6.91□□□□□ -1.3
PTPRO-204ENST00000445537 CLTCQ00610 1675 aaKnown RBP6.91□□□□□ -1.3
PTPRO-204ENST00000445537 ACEP12821 1306 aa6.91□□□□□ -1.3
PTPRO-204ENST00000445537 GGNBP2Q9H3C7 697 aa6.91□□□□□ -1.3
PTPRO-204ENST00000445537 SPATA31A6Q5VVP1 1343 aa6.9□□□□□ -1.3
PTPRO-204ENST00000445537 ABCA6Q8N139 1617 aa6.9□□□□□ -1.3
PTPRO-204ENST00000445537 USP47Q96K76 1375 aa6.9□□□□□ -1.3
PTPRO-204ENST00000445537 CEP170BQ9Y4F5 1589 aaPredicted RBP6.9□□□□□ -1.3
PTPRO-204ENST00000445537 U2AF1L5P0DN76 240 aaPredicted RBP6.9□□□□□ -1.31
PTPRO-204ENST00000445537 CANXP27824 592 aaKnown RBP6.9□□□□□ -1.31
PTPRO-204ENST00000445537 U2AF1Q01081 240 aaKnown RBP eCLIP6.9□□□□□ -1.31
PTPRO-204ENST00000445537 BRINP3Q76B58 766 aa6.9□□□□□ -1.31
PTPRO-204ENST00000445537 SLC12A5Q9H2X9 1139 aa6.9□□□□□ -1.31
PTPRO-204ENST00000445537 TEFQ10587 303 aa6.9□□□□□ -1.31
PTPRO-204ENST00000445537 TTC5Q8N0Z6 440 aa6.9□□□□□ -1.31
PTPRO-204ENST00000445537 PLA2R1Q13018 1463 aa6.89□□□□□ -1.31
PTPRO-204ENST00000445537 RBM6P78332 1123 aaKnown RBP6.89□□□□□ -1.31
PTPRO-204ENST00000445537 DDB1Q16531 1140 aa6.89□□□□□ -1.31
PTPRO-204ENST00000445537 PELP1Q8IZL8 1130 aaKnown RBP6.89□□□□□ -1.31
PTPRO-204ENST00000445537 LAS1LQ9Y4W2 734 aaKnown RBP6.89□□□□□ -1.31
PTPRO-204ENST00000445537 NEUROD2Q15784 382 aa6.89□□□□□ -1.31
PTPRO-204ENST00000445537 ZBTB47Q9UFB7 747 aaPredicted RBP6.89□□□□□ -1.31
PTPRO-204ENST00000445537 YTHDC2Q9H6S0 1430 aaKnown RBP6.89□□□□□ -1.31
PTPRO-204ENST00000445537 CHMP4AQ9BY43 222 aa6.88□□□□□ -1.31
PTPRO-204ENST00000445537 ZRANB1Q9UGI0 708 aa6.88□□□□□ -1.31
PTPRO-204ENST00000445537 AFF2P51816 1311 aa6.88□□□□□ -1.31
PTPRO-204ENST00000445537 ZNF316A6NFI3 1004 aaPredicted RBP6.88□□□□□ -1.31
PTPRO-204ENST00000445537 PANK3Q9H999 370 aa6.88□□□□□ -1.31
PTPRO-204ENST00000445537 SPG7Q9UQ90 795 aa6.88□□□□□ -1.31
PTPRO-204ENST00000445537 BCORL1Q5H9F3 1711 aa6.88□□□□□ -1.31
PTPRO-204ENST00000445537 C11orf95C9JLR9 678 aaPredicted RBP6.88□□□□□ -1.31
PTPRO-204ENST00000445537 KIDINS220Q9ULH0 1771 aa6.88□□□□□ -1.31
PTPRO-204ENST00000445537 FAM98CQ17RN3 349 aaKnown RBP6.87□□□□□ -1.31
PTPRO-204ENST00000445537 SIRT1Q96EB6 747 aa6.87□□□□□ -1.31
PTPRO-204ENST00000445537 SALL2Q9Y467 1007 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-204ENST00000445537 ABCC11Q96J66 1382 aa6.87□□□□□ -1.31
PTPRO-204ENST00000445537 TRPM2O94759 1503 aa6.87□□□□□ -1.31
PTPRO-204ENST00000445537 PLXNC1O60486 1568 aa6.87□□□□□ -1.31
PTPRO-204ENST00000445537 PLEKHO1Q53GL0 409 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-204ENST00000445537 METP08581 1390 aa6.87□□□□□ -1.31
PTPRO-204ENST00000445537 CDCA7Q9BWT1 371 aaPredicted RBP6.86□□□□□ -1.31
PTPRO-204ENST00000445537 RICTORQ6R327 1708 aa6.86□□□□□ -1.31
PTPRO-204ENST00000445537 CPS1P31327 1500 aa6.86□□□□□ -1.31
PTPRO-204ENST00000445537 INO80Q9ULG1 1556 aaPredicted RBP6.86□□□□□ -1.31
PTPRO-204ENST00000445537 TTC21AQ8NDW8 1320 aa6.86□□□□□ -1.31
PTPRO-204ENST00000445537 GCP02774 474 aa6.86□□□□□ -1.31
PTPRO-204ENST00000445537 MRS2Q9HD23 443 aa6.86□□□□□ -1.31
PTPRO-204ENST00000445537 WASHC2AQ641Q2 1341 aa6.86□□□□□ -1.31
PTPRO-204ENST00000445537 HSP90AB1P08238 724 aaKnown RBP6.86□□□□□ -1.31
PTPRO-204ENST00000445537 RBM42Q9BTD8 480 aaKnown RBP6.85□□□□□ -1.31
PTPRO-204ENST00000445537 FAM9BQ8IZU0 186 aa6.85□□□□□ -1.31
PTPRO-204ENST00000445537 PRDM15P57071 1507 aaPredicted RBP6.84□□□□□ -1.31
PTPRO-204ENST00000445537 DIAPH1O60610 1272 aaKnown RBP6.84□□□□□ -1.31
PTPRO-204ENST00000445537 APBA3O96018 575 aa6.84□□□□□ -1.31
PTPRO-204ENST00000445537 UNC5CLQ8IV45 518 aa6.84□□□□□ -1.31
PTPRO-204ENST00000445537 KRT27Q7Z3Y8 459 aa6.84□□□□□ -1.31
PTPRO-204ENST00000445537 EIF2AK4Q9P2K8 1649 aaKnown RBP6.84□□□□□ -1.31
PTPRO-204ENST00000445537 TCP11L2Q8N4U5 519 aa6.84□□□□□ -1.32
PTPRO-204ENST00000445537 REREQ9P2R6 1566 aa6.83□□□□□ -1.32
PTPRO-204ENST00000445537 CALD1Q05682 793 aaKnown RBP6.83□□□□□ -1.32
PTPRO-204ENST00000445537 LMOD3Q0VAK6 560 aa6.83□□□□□ -1.32
PTPRO-204ENST00000445537 BCL11AQ9H165 835 aa6.83□□□□□ -1.32
PTPRO-204ENST00000445537 KAT6BQ8WYB5 2073 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms