RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 NHSL1Q5SYE7 1610 aa27.35■■□□□ 1.97
LRRC42-204ENST00000444987 DISP3Q9P2K9 1392 aa27.35■■□□□ 1.97
LRRC42-204ENST00000444987 PLEKHH1Q9ULM0 1364 aa27.34■■□□□ 1.97
LRRC42-204ENST00000444987 JCADQ9P266 1359 aa27.32■■□□□ 1.96
LRRC42-204ENST00000444987 SIN3AQ96ST3 1273 aa27.31■■□□□ 1.96
LRRC42-204ENST00000444987 L3MBTL2Q969R5 705 aa27.3■■□□□ 1.96
LRRC42-204ENST00000444987 FMN2Q9NZ56 1722 aa27.3■■□□□ 1.96
LRRC42-204ENST00000444987 PRAM1Q96QH2 718 aa27.29■■□□□ 1.96
LRRC42-204ENST00000444987 ADGRB2O60241 1585 aa27.28■■□□□ 1.96
LRRC42-204ENST00000444987 POGKQ9P215 609 aa27.28■■□□□ 1.96
LRRC42-204ENST00000444987 TRAK1Q9UPV9 953 aa27.27■■□□□ 1.96
LRRC42-204ENST00000444987 SHPRHQ149N8 1683 aa27.27■■□□□ 1.96
LRRC42-204ENST00000444987 NEUROD1Q13562 356 aa27.26■■□□□ 1.95
LRRC42-204ENST00000444987 ARHGEF28Q8N1W1 1705 aaKnown RBP27.25■■□□□ 1.95
LRRC42-204ENST00000444987 ORAI2Q96SN7 254 aa27.23■■□□□ 1.95
LRRC42-204ENST00000444987 SPATA31A6Q5VVP1 1343 aa27.22■■□□□ 1.95
LRRC42-204ENST00000444987 LRRC59Q96AG4 307 aaKnown RBP27.22■■□□□ 1.95
LRRC42-204ENST00000444987 KIF1AQ12756 1690 aa27.21■■□□□ 1.95
LRRC42-204ENST00000444987 ESCO1Q5FWF5 840 aa27.2■■□□□ 1.94
LRRC42-204ENST00000444987 EIF3AQ14152 1382 aaKnown RBP27.2■■□□□ 1.94
LRRC42-204ENST00000444987 TRPM1Q7Z4N2 1603 aa27.19■■□□□ 1.94
LRRC42-204ENST00000444987 SOS2Q07890 1332 aaPredicted RBP27.18■■□□□ 1.94
LRRC42-204ENST00000444987 ANKARQ7Z5J8 1434 aa27.18■■□□□ 1.94
LRRC42-204ENST00000444987 SAFB2Q14151 953 aaKnown RBP eCLIP27.18■■□□□ 1.94
LRRC42-204ENST00000444987 NPHP3Q7Z494 1330 aa27.17■■□□□ 1.94
LRRC42-204ENST00000444987 NBPF1Q3BBV0 1214 aa27.16■■□□□ 1.94
LRRC42-204ENST00000444987 TONSLQ96HA7 1378 aa27.15■■□□□ 1.94
LRRC42-204ENST00000444987 PHF23Q9BUL5 403 aaPredicted RBP27.15■■□□□ 1.94
LRRC42-204ENST00000444987 RGPD8O14715 1765 aaPredicted RBP27.13■■□□□ 1.93
LRRC42-204ENST00000444987 NUTM2FA1L443 756 aa27.12■■□□□ 1.93
LRRC42-204ENST00000444987 DDX17Q92841 729 aaKnown RBP27.12■■□□□ 1.93
LRRC42-204ENST00000444987 MINK1Q8N4C8 1332 aaPredicted RBP27.12■■□□□ 1.93
LRRC42-204ENST00000444987 TULP4Q9NRJ4 1543 aa27.11■■□□□ 1.93
LRRC42-204ENST00000444987 USP32Q8NFA0 1604 aa27.1■■□□□ 1.93
LRRC42-204ENST00000444987 WASLO00401 505 aaPredicted RBP27.1■■□□□ 1.93
LRRC42-204ENST00000444987 PXDNQ92626 1479 aa27.1■■□□□ 1.93
LRRC42-204ENST00000444987 CLSPNQ9HAW4 1339 aa27.1■■□□□ 1.93
LRRC42-204ENST00000444987 PNPLA6Q8IY17 1366 aa27.09■■□□□ 1.93
LRRC42-204ENST00000444987 PCGF6Q9BYE7 350 aa27.09■■□□□ 1.93
LRRC42-204ENST00000444987 FOXO3O43524 673 aa27.08■■□□□ 1.93
LRRC42-204ENST00000444987 PHF8Q9UPP1 1060 aa27.08■■□□□ 1.93
LRRC42-204ENST00000444987 HIRIP3Q9BW71 556 aaPredicted RBP27.07■■□□□ 1.92
LRRC42-204ENST00000444987 ROCK2O75116 1388 aaKnown RBP27.07■■□□□ 1.92
LRRC42-204ENST00000444987 COL22A1Q8NFW1 1626 aaPredicted RBP27.06■■□□□ 1.92
LRRC42-204ENST00000444987 LRP6O75581 1613 aa27.05■■□□□ 1.92
LRRC42-204ENST00000444987 CENPJQ9HC77 1338 aaPredicted RBP27.05■■□□□ 1.92
LRRC42-204ENST00000444987 GPRASP1Q5JY77 1395 aa27.05■■□□□ 1.92
LRRC42-204ENST00000444987 ITSN1Q15811 1721 aa27.04■■□□□ 1.92
LRRC42-204ENST00000444987 NBPF8Q3BBV2 869 aa27.02■■□□□ 1.92
LRRC42-204ENST00000444987 QRICH2Q9H0J4 1663 aa27.01■■□□□ 1.92
LRRC42-204ENST00000444987 PSME1Q06323 249 aa27.01■■□□□ 1.91
LRRC42-204ENST00000444987 ILDR2Q71H61 639 aa27.01■■□□□ 1.91
LRRC42-204ENST00000444987 RALGAPBQ86X10 1494 aa27■■□□□ 1.91
LRRC42-204ENST00000444987 MEX3CQ5U5Q3 659 aaKnown RBP27■■□□□ 1.91
LRRC42-204ENST00000444987 PRR36Q9H6K5 1346 aa26.99■■□□□ 1.91
LRRC42-204ENST00000444987 KRT28Q7Z3Y7 464 aa26.99■■□□□ 1.91
LRRC42-204ENST00000444987 TIMELESSQ9UNS1 1208 aa26.99■■□□□ 1.91
LRRC42-204ENST00000444987 ATP7BP35670 1465 aa26.99■■□□□ 1.91
LRRC42-204ENST00000444987 CDK19Q9BWU1 502 aa26.98■■□□□ 1.91
LRRC42-204ENST00000444987 RGS17Q9UGC6 210 aaPredicted RBP26.98■■□□□ 1.91
LRRC42-204ENST00000444987 SBNO1A3KN83 1393 aa26.97■■□□□ 1.91
LRRC42-204ENST00000444987 SPATA31A3Q5VYP0 1347 aa26.96■■□□□ 1.91
LRRC42-204ENST00000444987 NUTM2BA6NNL0 878 aaPredicted RBP26.96■■□□□ 1.91
LRRC42-204ENST00000444987 NUTM2EB1AL46 878 aaPredicted RBP26.96■■□□□ 1.91
LRRC42-204ENST00000444987 NUTM2AQ8IVF1 878 aaPredicted RBP26.96■■□□□ 1.91
LRRC42-204ENST00000444987 NUDT16Q96DE0 195 aaKnown RBP26.96■■□□□ 1.91
LRRC42-204ENST00000444987 TOPAZ1Q8N9V7 1692 aa26.95■■□□□ 1.91
LRRC42-204ENST00000444987 XPCQ01831 940 aaPredicted RBP26.95■■□□□ 1.9
LRRC42-204ENST00000444987 TNS3Q68CZ2 1445 aa26.93■■□□□ 1.9
LRRC42-204ENST00000444987 PMFBP1Q8TBY8 1022 aa26.93■■□□□ 1.9
LRRC42-204ENST00000444987 ZNF772Q68DY9 489 aaPredicted RBP26.92■■□□□ 1.9
LRRC42-204ENST00000444987 CARD11Q9BXL7 1154 aa26.92■■□□□ 1.9
LRRC42-204ENST00000444987 CCDC61Q9Y6R9 512 aa26.92■■□□□ 1.9
LRRC42-204ENST00000444987 ARHGEF10O15013 1369 aa26.91■■□□□ 1.9
LRRC42-204ENST00000444987 TRPM3Q9HCF6 1732 aaPredicted RBP26.9■■□□□ 1.9
LRRC42-204ENST00000444987 EVC2Q86UK5 1308 aa26.9■■□□□ 1.9
LRRC42-204ENST00000444987 SBNO2Q9Y2G9 1366 aa26.89■■□□□ 1.9
LRRC42-204ENST00000444987 NGDNQ8NEJ9 315 aaKnown RBP26.89■■□□□ 1.9
LRRC42-204ENST00000444987 PLEKHG3A1L390 1219 aa26.88■■□□□ 1.89
LRRC42-204ENST00000444987 MARF1Q9Y4F3 1742 aaKnown RBP26.87■■□□□ 1.89
LRRC42-204ENST00000444987 POLR3AO14802 1390 aaPredicted RBP26.87■■□□□ 1.89
LRRC42-204ENST00000444987 SRPK2P78362 688 aaKnown RBP26.87■■□□□ 1.89
LRRC42-204ENST00000444987 POTEAQ6S8J7 498 aa26.85■■□□□ 1.89
LRRC42-204ENST00000444987 ALS2Q96Q42 1657 aa26.85■■□□□ 1.89
LRRC42-204ENST00000444987 SOCS7O14512 581 aa26.83■■□□□ 1.89
LRRC42-204ENST00000444987 AFF2P51816 1311 aa26.83■■□□□ 1.89
LRRC42-204ENST00000444987 ADAMTS2O95450 1211 aa26.82■■□□□ 1.88
LRRC42-204ENST00000444987 C8orf37Q96NL8 207 aa26.82■■□□□ 1.88
LRRC42-204ENST00000444987 PPIP5K1Q6PFW1 1433 aa26.82■■□□□ 1.88
LRRC42-204ENST00000444987 CCER1Q8TC90 406 aaPredicted RBP26.81■■□□□ 1.88
LRRC42-204ENST00000444987 CABP2Q9NPB3 220 aa26.81■■□□□ 1.88
LRRC42-204ENST00000444987 SLC24A1O60721 1099 aa26.8■■□□□ 1.88
LRRC42-204ENST00000444987 NGLY1Q96IV0 654 aa26.8■■□□□ 1.88
LRRC42-204ENST00000444987 ACEP12821 1306 aa26.8■■□□□ 1.88
LRRC42-204ENST00000444987 BRD4O60885 1362 aaPredicted RBP26.8■■□□□ 1.88
LRRC42-204ENST00000444987 ABCA3Q99758 1704 aa26.79■■□□□ 1.88
LRRC42-204ENST00000444987 FNBP4Q8N3X1 1017 aaPredicted RBP26.78■■□□□ 1.88
LRRC42-204ENST00000444987 ATAD2Q6PL18 1390 aa26.77■■□□□ 1.88
LRRC42-204ENST00000444987 LMOD2Q6P5Q4 547 aa26.77■■□□□ 1.88
LRRC42-204ENST00000444987 HAP1P54257 671 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms