RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 JCADQ9P266 1359 aa19.95■□□□□ 0.78
LTBR-202ENST00000440421 DDX17Q92841 729 aaKnown RBP19.94■□□□□ 0.78
LTBR-202ENST00000440421 ORAI2Q96SN7 254 aa19.94■□□□□ 0.78
LTBR-202ENST00000440421 ADGRB1O14514 1584 aa19.94■□□□□ 0.78
LTBR-202ENST00000440421 SAFB2Q14151 953 aaKnown RBP eCLIP19.93■□□□□ 0.78
LTBR-202ENST00000440421 PRAM1Q96QH2 718 aa19.93■□□□□ 0.78
LTBR-202ENST00000440421 SIN3AQ96ST3 1273 aa19.93■□□□□ 0.78
LTBR-202ENST00000440421 NHSL1Q5SYE7 1610 aa19.93■□□□□ 0.78
LTBR-202ENST00000440421 NUTM2FA1L443 756 aa19.92■□□□□ 0.78
LTBR-202ENST00000440421 SIRT1Q96EB6 747 aa19.92■□□□□ 0.78
LTBR-202ENST00000440421 TRAK1Q9UPV9 953 aa19.92■□□□□ 0.78
LTBR-202ENST00000440421 POGKQ9P215 609 aa19.91■□□□□ 0.78
LTBR-202ENST00000440421 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
LTBR-202ENST00000440421 ESCO1Q5FWF5 840 aa19.89■□□□□ 0.77
LTBR-202ENST00000440421 DLC1Q96QB1 1528 aa19.89■□□□□ 0.77
LTBR-202ENST00000440421 FMN2Q9NZ56 1722 aa19.87■□□□□ 0.77
LTBR-202ENST00000440421 SHPRHQ149N8 1683 aa19.87■□□□□ 0.77
LTBR-202ENST00000440421 L3MBTL2Q969R5 705 aa19.86■□□□□ 0.77
LTBR-202ENST00000440421 SPATA31A6Q5VVP1 1343 aa19.85■□□□□ 0.77
LTBR-202ENST00000440421 LRRC59Q96AG4 307 aaKnown RBP19.85■□□□□ 0.77
LTBR-202ENST00000440421 NUTM2BA6NNL0 878 aaPredicted RBP19.83■□□□□ 0.77
LTBR-202ENST00000440421 NUTM2EB1AL46 878 aaPredicted RBP19.83■□□□□ 0.77
LTBR-202ENST00000440421 NUTM2AQ8IVF1 878 aaPredicted RBP19.83■□□□□ 0.77
LTBR-202ENST00000440421 HIRIP3Q9BW71 556 aaPredicted RBP19.83■□□□□ 0.77
LTBR-202ENST00000440421 LRP6O75581 1613 aa19.83■□□□□ 0.76
LTBR-202ENST00000440421 KIAA1210Q9ULL0 1709 aa19.82■□□□□ 0.76
LTBR-202ENST00000440421 MINK1Q8N4C8 1332 aaPredicted RBP19.82■□□□□ 0.76
LTBR-202ENST00000440421 NBPF1Q3BBV0 1214 aa19.82■□□□□ 0.76
LTBR-202ENST00000440421 RGS17Q9UGC6 210 aaPredicted RBP19.82■□□□□ 0.76
LTBR-202ENST00000440421 SOS2Q07890 1332 aaPredicted RBP19.81■□□□□ 0.76
LTBR-202ENST00000440421 FOXO3O43524 673 aa19.81■□□□□ 0.76
LTBR-202ENST00000440421 XPCQ01831 940 aaPredicted RBP19.81■□□□□ 0.76
LTBR-202ENST00000440421 MEX3CQ5U5Q3 659 aaKnown RBP19.81■□□□□ 0.76
LTBR-202ENST00000440421 NPHP3Q7Z494 1330 aa19.8■□□□□ 0.76
LTBR-202ENST00000440421 ARHGEF28Q8N1W1 1705 aaKnown RBP19.8■□□□□ 0.76
LTBR-202ENST00000440421 PNPLA6Q8IY17 1366 aa19.8■□□□□ 0.76
LTBR-202ENST00000440421 RGPD8O14715 1765 aaPredicted RBP19.8■□□□□ 0.76
LTBR-202ENST00000440421 ADGRB2O60241 1585 aa19.78■□□□□ 0.76
LTBR-202ENST00000440421 KIF1AQ12756 1690 aa19.76■□□□□ 0.75
LTBR-202ENST00000440421 PXDNQ92626 1479 aa19.76■□□□□ 0.75
LTBR-202ENST00000440421 PHF8Q9UPP1 1060 aa19.75■□□□□ 0.75
LTBR-202ENST00000440421 USP32Q8NFA0 1604 aa19.75■□□□□ 0.75
LTBR-202ENST00000440421 WASLO00401 505 aaPredicted RBP19.74■□□□□ 0.75
LTBR-202ENST00000440421 POTEAQ6S8J7 498 aa19.74■□□□□ 0.75
LTBR-202ENST00000440421 SOCS7O14512 581 aa19.73■□□□□ 0.75
LTBR-202ENST00000440421 ANKARQ7Z5J8 1434 aa19.73■□□□□ 0.75
LTBR-202ENST00000440421 KRT28Q7Z3Y7 464 aa19.72■□□□□ 0.75
LTBR-202ENST00000440421 PMFBP1Q8TBY8 1022 aa19.72■□□□□ 0.75
LTBR-202ENST00000440421 TRPM1Q7Z4N2 1603 aa19.72■□□□□ 0.75
LTBR-202ENST00000440421 PRR36Q9H6K5 1346 aa19.72■□□□□ 0.75
LTBR-202ENST00000440421 EIF3AQ14152 1382 aaKnown RBP19.71■□□□□ 0.75
LTBR-202ENST00000440421 TULP4Q9NRJ4 1543 aa19.71■□□□□ 0.75
LTBR-202ENST00000440421 ADAMTS2O95450 1211 aa19.7■□□□□ 0.74
LTBR-202ENST00000440421 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
LTBR-202ENST00000440421 PSME1Q06323 249 aa19.68■□□□□ 0.74
LTBR-202ENST00000440421 NBPF8Q3BBV2 869 aa19.68■□□□□ 0.74
LTBR-202ENST00000440421 C8orf37Q96NL8 207 aa19.68■□□□□ 0.74
LTBR-202ENST00000440421 CDK19Q9BWU1 502 aa19.68■□□□□ 0.74
LTBR-202ENST00000440421 PCGF6Q9BYE7 350 aa19.68■□□□□ 0.74
LTBR-202ENST00000440421 COL22A1Q8NFW1 1626 aaPredicted RBP19.68■□□□□ 0.74
LTBR-202ENST00000440421 ROCK2O75116 1388 aaKnown RBP19.68■□□□□ 0.74
LTBR-202ENST00000440421 SPATA31A3Q5VYP0 1347 aa19.67■□□□□ 0.74
LTBR-202ENST00000440421 CENPJQ9HC77 1338 aaPredicted RBP19.67■□□□□ 0.74
LTBR-202ENST00000440421 ZNF772Q68DY9 489 aaPredicted RBP19.66■□□□□ 0.74
LTBR-202ENST00000440421 AFF2P51816 1311 aa19.66■□□□□ 0.74
LTBR-202ENST00000440421 NUDT16Q96DE0 195 aaKnown RBP19.65■□□□□ 0.74
LTBR-202ENST00000440421 QRICH2Q9H0J4 1663 aa19.65■□□□□ 0.74
LTBR-202ENST00000440421 PLEKHG5O94827 1062 aa19.64■□□□□ 0.73
LTBR-202ENST00000440421 LMOD2Q6P5Q4 547 aa19.64■□□□□ 0.73
LTBR-202ENST00000440421 ATP7BP35670 1465 aa19.64■□□□□ 0.73
LTBR-202ENST00000440421 TNS3Q68CZ2 1445 aa19.63■□□□□ 0.73
LTBR-202ENST00000440421 NGLY1Q96IV0 654 aa19.63■□□□□ 0.73
LTBR-202ENST00000440421 ITSN1Q15811 1721 aa19.62■□□□□ 0.73
LTBR-202ENST00000440421 NGDNQ8NEJ9 315 aaKnown RBP19.62■□□□□ 0.73
LTBR-202ENST00000440421 SBNO1A3KN83 1393 aa19.61■□□□□ 0.73
LTBR-202ENST00000440421 GPRASP1Q5JY77 1395 aa19.61■□□□□ 0.73
LTBR-202ENST00000440421 SRPK2P78362 688 aaKnown RBP19.61■□□□□ 0.73
LTBR-202ENST00000440421 CABLES1Q8TDN4 633 aa19.59■□□□□ 0.73
LTBR-202ENST00000440421 CABP2Q9NPB3 220 aa19.59■□□□□ 0.73
LTBR-202ENST00000440421 TRPM3Q9HCF6 1732 aaPredicted RBP19.59■□□□□ 0.73
LTBR-202ENST00000440421 HAP1P54257 671 aaPredicted RBP19.58■□□□□ 0.72
LTBR-202ENST00000440421 CARD11Q9BXL7 1154 aa19.58■□□□□ 0.72
LTBR-202ENST00000440421 CCDC61Q9Y6R9 512 aa19.58■□□□□ 0.72
LTBR-202ENST00000440421 TOPAZ1Q8N9V7 1692 aa19.58■□□□□ 0.72
LTBR-202ENST00000440421 ARHGEF10O15013 1369 aa19.57■□□□□ 0.72
LTBR-202ENST00000440421 MARF1Q9Y4F3 1742 aaKnown RBP19.56■□□□□ 0.72
LTBR-202ENST00000440421 RALGAPBQ86X10 1494 aa19.56■□□□□ 0.72
LTBR-202ENST00000440421 PAK3O75914 559 aaPredicted RBP19.56■□□□□ 0.72
LTBR-202ENST00000440421 RXRBP28702 533 aa19.56■□□□□ 0.72
LTBR-202ENST00000440421 USP21Q9UK80 565 aa19.56■□□□□ 0.72
LTBR-202ENST00000440421 ACEP12821 1306 aa19.55■□□□□ 0.72
LTBR-202ENST00000440421 QTRT2Q9H974 415 aaKnown RBP19.55■□□□□ 0.72
LTBR-202ENST00000440421 EVC2Q86UK5 1308 aa19.53■□□□□ 0.72
LTBR-202ENST00000440421 ALS2Q96Q42 1657 aa19.53■□□□□ 0.72
LTBR-202ENST00000440421 PPIP5K1Q6PFW1 1433 aa19.53■□□□□ 0.72
LTBR-202ENST00000440421 FNBP4Q8N3X1 1017 aaPredicted RBP19.53■□□□□ 0.72
LTBR-202ENST00000440421 ABCA3Q99758 1704 aa19.52■□□□□ 0.72
LTBR-202ENST00000440421 PLEKHG3A1L390 1219 aa19.52■□□□□ 0.72
LTBR-202ENST00000440421 POLR3AO14802 1390 aaPredicted RBP19.52■□□□□ 0.72
LTBR-202ENST00000440421 RBM6P78332 1123 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms