RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
HSPG2-206ENST00000439717 POGKQ9P215 609 aa16.93■□□□□ 0.3
HSPG2-206ENST00000439717 MST1RQ04912 1400 aa16.93■□□□□ 0.3
HSPG2-206ENST00000439717 CDC42BPGQ6DT37 1551 aa16.93■□□□□ 0.3
HSPG2-206ENST00000439717 ROBO1Q9Y6N7 1651 aa16.92■□□□□ 0.3
HSPG2-206ENST00000439717 HSPA1LP34931 641 aa16.92■□□□□ 0.3
HSPG2-206ENST00000439717 TIMELESSQ9UNS1 1208 aa16.92■□□□□ 0.3
HSPG2-206ENST00000439717 TRPM1Q7Z4N2 1603 aa16.91■□□□□ 0.3
HSPG2-206ENST00000439717 NBPF8Q3BBV2 869 aa16.89■□□□□ 0.29
HSPG2-206ENST00000439717 ROCK2O75116 1388 aaKnown RBP16.89■□□□□ 0.29
HSPG2-206ENST00000439717 C1orf167Q5SNV9 1468 aa16.88■□□□□ 0.29
HSPG2-206ENST00000439717 ARHGEF28Q8N1W1 1705 aaKnown RBP16.88■□□□□ 0.29
HSPG2-206ENST00000439717 SAFB2Q14151 953 aaKnown RBP eCLIP16.88■□□□□ 0.29
HSPG2-206ENST00000439717 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
HSPG2-206ENST00000439717 ADGRB2O60241 1585 aa16.86■□□□□ 0.29
HSPG2-206ENST00000439717 GPRASP1Q5JY77 1395 aa16.86■□□□□ 0.29
HSPG2-206ENST00000439717 RALGAPBQ86X10 1494 aa16.86■□□□□ 0.29
HSPG2-206ENST00000439717 AHDC1Q5TGY3 1603 aaPredicted RBP16.84■□□□□ 0.29
HSPG2-206ENST00000439717 FMN2Q9NZ56 1722 aa16.84■□□□□ 0.29
HSPG2-206ENST00000439717 EIF3AQ14152 1382 aaKnown RBP16.83■□□□□ 0.28
HSPG2-206ENST00000439717 MINK1Q8N4C8 1332 aaPredicted RBP16.83■□□□□ 0.28
HSPG2-206ENST00000439717 CENPJQ9HC77 1338 aaPredicted RBP16.82■□□□□ 0.28
HSPG2-206ENST00000439717 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
HSPG2-206ENST00000439717 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
HSPG2-206ENST00000439717 WASLO00401 505 aaPredicted RBP16.81■□□□□ 0.28
HSPG2-206ENST00000439717 ESCO1Q5FWF5 840 aa16.81■□□□□ 0.28
HSPG2-206ENST00000439717 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
HSPG2-206ENST00000439717 CARD11Q9BXL7 1154 aa16.81■□□□□ 0.28
HSPG2-206ENST00000439717 ANKARQ7Z5J8 1434 aa16.8■□□□□ 0.28
HSPG2-206ENST00000439717 NUTM2FA1L443 756 aa16.8■□□□□ 0.28
HSPG2-206ENST00000439717 NHSL1Q5SYE7 1610 aa16.8■□□□□ 0.28
HSPG2-206ENST00000439717 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
HSPG2-206ENST00000439717 TULP4Q9NRJ4 1543 aa16.77■□□□□ 0.28
HSPG2-206ENST00000439717 NPHP3Q7Z494 1330 aa16.76■□□□□ 0.27
HSPG2-206ENST00000439717 QRICH2Q9H0J4 1663 aa16.76■□□□□ 0.27
HSPG2-206ENST00000439717 CDK19Q9BWU1 502 aa16.76■□□□□ 0.27
HSPG2-206ENST00000439717 JCADQ9P266 1359 aa16.76■□□□□ 0.27
HSPG2-206ENST00000439717 KIF1AQ12756 1690 aa16.75■□□□□ 0.27
HSPG2-206ENST00000439717 SOS2Q07890 1332 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-206ENST00000439717 LRRC59Q96AG4 307 aaKnown RBP16.75■□□□□ 0.27
HSPG2-206ENST00000439717 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
HSPG2-206ENST00000439717 DDX17Q92841 729 aaKnown RBP16.74■□□□□ 0.27
HSPG2-206ENST00000439717 PHF8Q9UPP1 1060 aa16.74■□□□□ 0.27
HSPG2-206ENST00000439717 PRR36Q9H6K5 1346 aa16.73■□□□□ 0.27
HSPG2-206ENST00000439717 FOXO3O43524 673 aa16.73■□□□□ 0.27
HSPG2-206ENST00000439717 SBNO2Q9Y2G9 1366 aa16.73■□□□□ 0.27
HSPG2-206ENST00000439717 EVC2Q86UK5 1308 aa16.72■□□□□ 0.27
HSPG2-206ENST00000439717 RGPD8O14715 1765 aaPredicted RBP16.72■□□□□ 0.27
HSPG2-206ENST00000439717 NUDT16Q96DE0 195 aaKnown RBP16.72■□□□□ 0.27
HSPG2-206ENST00000439717 ATP7BP35670 1465 aa16.72■□□□□ 0.27
HSPG2-206ENST00000439717 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
HSPG2-206ENST00000439717 PXDNQ92626 1479 aa16.7■□□□□ 0.26
HSPG2-206ENST00000439717 SLC24A1O60721 1099 aa16.7■□□□□ 0.26
HSPG2-206ENST00000439717 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
HSPG2-206ENST00000439717 CCDC61Q9Y6R9 512 aa16.7■□□□□ 0.26
HSPG2-206ENST00000439717 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
HSPG2-206ENST00000439717 PSME1Q06323 249 aa16.69■□□□□ 0.26
HSPG2-206ENST00000439717 PMFBP1Q8TBY8 1022 aa16.69■□□□□ 0.26
HSPG2-206ENST00000439717 ITSN1Q15811 1721 aa16.69■□□□□ 0.26
HSPG2-206ENST00000439717 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
HSPG2-206ENST00000439717 CABP2Q9NPB3 220 aa16.67■□□□□ 0.26
HSPG2-206ENST00000439717 MED1Q15648 1581 aaPredicted RBP16.67■□□□□ 0.26
HSPG2-206ENST00000439717 PNPLA6Q8IY17 1366 aa16.66■□□□□ 0.26
HSPG2-206ENST00000439717 USP47Q96K76 1375 aa16.66■□□□□ 0.26
HSPG2-206ENST00000439717 TOPAZ1Q8N9V7 1692 aa16.66■□□□□ 0.26
HSPG2-206ENST00000439717 ST20-MTHFSA0A0A6YYL1 179 aa16.66■□□□□ 0.26
HSPG2-206ENST00000439717 PLEKHG3A1L390 1219 aa16.66■□□□□ 0.26
HSPG2-206ENST00000439717 XPCQ01831 940 aaPredicted RBP16.66■□□□□ 0.26
HSPG2-206ENST00000439717 NGDNQ8NEJ9 315 aaKnown RBP16.66■□□□□ 0.26
HSPG2-206ENST00000439717 SBNO1A3KN83 1393 aa16.65■□□□□ 0.26
HSPG2-206ENST00000439717 SPATA31A3Q5VYP0 1347 aa16.64■□□□□ 0.25
HSPG2-206ENST00000439717 POLR3AO14802 1390 aaPredicted RBP16.64■□□□□ 0.25
HSPG2-206ENST00000439717 ATAD2Q6PL18 1390 aa16.64■□□□□ 0.25
HSPG2-206ENST00000439717 PPIP5K1Q6PFW1 1433 aa16.63■□□□□ 0.25
HSPG2-206ENST00000439717 PUS7Q96PZ0 661 aaKnown RBP16.63■□□□□ 0.25
HSPG2-206ENST00000439717 TESK2Q96S53 571 aa16.63■□□□□ 0.25
HSPG2-206ENST00000439717 ACEP12821 1306 aa16.62■□□□□ 0.25
HSPG2-206ENST00000439717 COL22A1Q8NFW1 1626 aaPredicted RBP16.62■□□□□ 0.25
HSPG2-206ENST00000439717 DISP3Q9P2K9 1392 aa16.62■□□□□ 0.25
HSPG2-206ENST00000439717 TNS3Q68CZ2 1445 aa16.62■□□□□ 0.25
HSPG2-206ENST00000439717 ARHGEF10O15013 1369 aa16.61■□□□□ 0.25
HSPG2-206ENST00000439717 CABP1Q9NZU7 370 aa16.6■□□□□ 0.25
HSPG2-206ENST00000439717 LRP6O75581 1613 aa16.59■□□□□ 0.25
HSPG2-206ENST00000439717 BRD4O60885 1362 aaPredicted RBP16.59■□□□□ 0.25
HSPG2-206ENST00000439717 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
HSPG2-206ENST00000439717 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
HSPG2-206ENST00000439717 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
HSPG2-206ENST00000439717 TMF1P82094 1093 aa16.58■□□□□ 0.24
HSPG2-206ENST00000439717 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
HSPG2-206ENST00000439717 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
HSPG2-206ENST00000439717 EIF4G2P78344 907 aaKnown RBP eCLIP16.57■□□□□ 0.24
HSPG2-206ENST00000439717 MEX3CQ5U5Q3 659 aaKnown RBP16.57■□□□□ 0.24
HSPG2-206ENST00000439717 CDCA8Q53HL2 280 aa16.56■□□□□ 0.24
HSPG2-206ENST00000439717 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
HSPG2-206ENST00000439717 PAK3O75914 559 aaPredicted RBP16.55■□□□□ 0.24
HSPG2-206ENST00000439717 LMOD2Q6P5Q4 547 aa16.55■□□□□ 0.24
HSPG2-206ENST00000439717 ALS2Q96Q42 1657 aa16.55■□□□□ 0.24
HSPG2-206ENST00000439717 NINLQ9Y2I6 1382 aa16.54■□□□□ 0.24
HSPG2-206ENST00000439717 USP6P35125 1406 aa16.53■□□□□ 0.24
HSPG2-206ENST00000439717 CPSF1Q10570 1443 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms