RNA–Protein interactions for RNA: ENST00000439704.1

NMD3P1-201, Transcript of NMD3 ribosome export adaptor pseudogene 1, humanhuman

BASIC

Gene NMD3P1, Length 1,488 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3P1-201ENST00000439704 NDUFV2P19404 249 aa7.8□□□□□ -1.16
NMD3P1-201ENST00000439704 PCDHGC3Q9UN70 934 aa7.8□□□□□ -1.16
NMD3P1-201ENST00000439704 SLC19A1P41440 591 aa7.78□□□□□ -1.16
NMD3P1-201ENST00000439704 MMP16P51512 607 aa7.78□□□□□ -1.16
NMD3P1-201ENST00000439704 TPRNQ4KMQ1 711 aa7.78□□□□□ -1.16
NMD3P1-201ENST00000439704 RSPH6AQ9H0K4 717 aa7.78□□□□□ -1.16
NMD3P1-201ENST00000439704 KDM4CQ9H3R0 1056 aa7.78□□□□□ -1.16
NMD3P1-201ENST00000439704 SPDYE5A6NIY4 337 aa7.77□□□□□ -1.17
NMD3P1-201ENST00000439704 C6orf229H3BNL8 230 aa7.77□□□□□ -1.17
NMD3P1-201ENST00000439704 SPTLC1O15269 473 aa7.77□□□□□ -1.17
NMD3P1-201ENST00000439704 RSBN1LQ6PCB5 846 aaPredicted RBP7.77□□□□□ -1.17
NMD3P1-201ENST00000439704 RIC3Q7Z5B4 369 aa7.77□□□□□ -1.17
NMD3P1-201ENST00000439704 RETREG3Q86VR2 466 aa7.77□□□□□ -1.17
NMD3P1-201ENST00000439704 SYMPKQ92797 1274 aaKnown RBP7.77□□□□□ -1.17
NMD3P1-201ENST00000439704 GPBP1L1Q9HC44 474 aaPredicted RBP7.76□□□□□ -1.17
NMD3P1-201ENST00000439704 PRDM9Q9NQV7 894 aa7.76□□□□□ -1.17
NMD3P1-201ENST00000439704 DXOO77932 396 aaKnown RBP7.75□□□□□ -1.17
NMD3P1-201ENST00000439704 EMID1Q96A84 441 aaPredicted RBP7.75□□□□□ -1.17
NMD3P1-201ENST00000439704 DDRGK1Q96HY6 314 aa7.75□□□□□ -1.17
NMD3P1-201ENST00000439704 ARXQ96QS3 562 aa7.75□□□□□ -1.17
NMD3P1-201ENST00000439704 IRX2Q9BZI1 471 aaPredicted RBP7.75□□□□□ -1.17
NMD3P1-201ENST00000439704 FCF1Q9Y324 198 aaKnown RBP7.75□□□□□ -1.17
NMD3P1-201ENST00000439704 MTMR2Q13614 643 aa7.75□□□□□ -1.17
NMD3P1-201ENST00000439704 MYSM1Q5VVJ2 828 aa7.75□□□□□ -1.17
NMD3P1-201ENST00000439704 LIAT1Q6ZQX7 453 aa7.75□□□□□ -1.17
NMD3P1-201ENST00000439704 RPIAP49247 311 aa7.74□□□□□ -1.17
NMD3P1-201ENST00000439704 TUSC1Q2TAM9 212 aa7.74□□□□□ -1.17
NMD3P1-201ENST00000439704 PLA2G2CQ5R387 149 aa7.74□□□□□ -1.17
NMD3P1-201ENST00000439704 PRPF38BQ5VTL8 546 aaKnown RBP7.74□□□□□ -1.17
NMD3P1-201ENST00000439704 SPRYD7Q5W111 196 aa7.74□□□□□ -1.17
NMD3P1-201ENST00000439704 PCDHB15Q9Y5E8 787 aa7.74□□□□□ -1.17
NMD3P1-201ENST00000439704 CD2BP2O95400 341 aaKnown RBP7.73□□□□□ -1.17
NMD3P1-201ENST00000439704 JUNDP17535 347 aa7.73□□□□□ -1.17
NMD3P1-201ENST00000439704 ZNF598Q86UK7 904 aaKnown RBP7.73□□□□□ -1.17
NMD3P1-201ENST00000439704 FAM117AQ9C073 453 aa7.73□□□□□ -1.17
NMD3P1-201ENST00000439704 LAPTM4AQ15012 233 aa7.72□□□□□ -1.17
NMD3P1-201ENST00000439704 DESI1Q6ICB0 168 aa7.72□□□□□ -1.17
NMD3P1-201ENST00000439704 ZBTB3Q9H5J0 574 aa7.72□□□□□ -1.17
NMD3P1-201ENST00000439704 ZBTB24O43167 697 aaPredicted RBP7.71□□□□□ -1.18
NMD3P1-201ENST00000439704 HRCP23327 699 aa7.71□□□□□ -1.18
NMD3P1-201ENST00000439704 PRR7Q8TB68 274 aa7.71□□□□□ -1.18
NMD3P1-201ENST00000439704 NEUROD2Q15784 382 aa7.7□□□□□ -1.18
NMD3P1-201ENST00000439704 LIMD1Q9UGP4 676 aa7.7□□□□□ -1.18
NMD3P1-201ENST00000439704 TIMELESSQ9UNS1 1208 aa7.7□□□□□ -1.18
NMD3P1-201ENST00000439704 GFRA3O60609 400 aa7.69□□□□□ -1.18
NMD3P1-201ENST00000439704 CLK2P49760 499 aaKnown RBP7.69□□□□□ -1.18
NMD3P1-201ENST00000439704 SKIV2LQ15477 1246 aaKnown RBP7.69□□□□□ -1.18
NMD3P1-201ENST00000439704 CCDC24Q8N4L8 307 aa7.69□□□□□ -1.18
NMD3P1-201ENST00000439704 POLR3EQ9NVU0 708 aa7.69□□□□□ -1.18
NMD3P1-201ENST00000439704 NUTM2BA6NNL0 878 aaPredicted RBP7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 NUTM2EB1AL46 878 aaPredicted RBP7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 LILRB3O75022 631 aa7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 CSPP1Q1MSJ5 1256 aa7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 ZNF697Q5TEC3 545 aa7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 NUTM2DQ5VT03 806 aaPredicted RBP7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 NUTM2AQ8IVF1 878 aaPredicted RBP7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 PLEKHG3A1L390 1219 aa7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 PTPRNQ16849 979 aa7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 SH3D19Q5HYK7 790 aa7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 NUDT12Q9BQG2 462 aa7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 PDZRN3Q9UPQ7 1066 aa7.68□□□□□ -1.18
NMD3P1-201ENST00000439704 BRPF1P55201 1214 aaPredicted RBP7.67□□□□□ -1.18
NMD3P1-201ENST00000439704 QPCTQ16769 361 aa7.67□□□□□ -1.18
NMD3P1-201ENST00000439704 CABLES1Q8TDN4 633 aa7.67□□□□□ -1.18
NMD3P1-201ENST00000439704 CFAP99D6REC4 459 aa7.66□□□□□ -1.18
NMD3P1-201ENST00000439704 NRG2O14511 850 aaPredicted RBP7.66□□□□□ -1.18
NMD3P1-201ENST00000439704 CCNYL3P0C7X3 344 aa7.66□□□□□ -1.18
NMD3P1-201ENST00000439704 LYPD8Q6UX82 237 aa7.66□□□□□ -1.18
NMD3P1-201ENST00000439704 EVA1BQ9NVM1 165 aa7.66□□□□□ -1.18
NMD3P1-201ENST00000439704 PRR20EP86478 221 aa7.65□□□□□ -1.18
NMD3P1-201ENST00000439704 PRR20CP86479 221 aa7.65□□□□□ -1.18
NMD3P1-201ENST00000439704 PRR20DP86480 221 aa7.65□□□□□ -1.18
NMD3P1-201ENST00000439704 PRR20BP86481 221 aa7.65□□□□□ -1.18
NMD3P1-201ENST00000439704 PRR20AP86496 221 aa7.65□□□□□ -1.18
NMD3P1-201ENST00000439704 TRIM32Q13049 653 aa7.65□□□□□ -1.18
NMD3P1-201ENST00000439704 TRIM67Q6ZTA4 783 aa7.65□□□□□ -1.18
NMD3P1-201ENST00000439704 GOPCQ9HD26 462 aa7.65□□□□□ -1.18
NMD3P1-201ENST00000439704 GDF9O60383 454 aa7.64□□□□□ -1.19
NMD3P1-201ENST00000439704 RTL5Q5HYW3 569 aaPredicted RBP7.63□□□□□ -1.19
NMD3P1-201ENST00000439704 PTCRAQ6ISU1 281 aaPredicted RBP7.63□□□□□ -1.19
NMD3P1-201ENST00000439704 PROCA1Q8NCQ7 364 aaPredicted RBP7.63□□□□□ -1.19
NMD3P1-201ENST00000439704 IL27Q8NEV9 243 aa7.63□□□□□ -1.19
NMD3P1-201ENST00000439704 ATP1B4Q9UN42 357 aaPredicted RBP7.63□□□□□ -1.19
NMD3P1-201ENST00000439704 KCNH2Q12809 1159 aa7.62□□□□□ -1.19
NMD3P1-201ENST00000439704 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.62□□□□□ -1.19
NMD3P1-201ENST00000439704 PKD2L1Q9P0L9 805 aa7.62□□□□□ -1.19
NMD3P1-201ENST00000439704 WNT7BP56706 349 aa7.62□□□□□ -1.19
NMD3P1-201ENST00000439704 FOXC1Q12948 553 aa7.62□□□□□ -1.19
NMD3P1-201ENST00000439704 HELBQ8NG08 1087 aaPredicted RBP7.62□□□□□ -1.19
NMD3P1-201ENST00000439704 WNT7AO00755 349 aa7.61□□□□□ -1.19
NMD3P1-201ENST00000439704 PPP2R2DQ66LE6 453 aa7.61□□□□□ -1.19
NMD3P1-201ENST00000439704 Q6ZNB5 142 aa7.61□□□□□ -1.19
NMD3P1-201ENST00000439704 TSC1Q92574 1164 aa7.61□□□□□ -1.19
NMD3P1-201ENST00000439704 TNFRSF10AO00220 468 aa7.6□□□□□ -1.19
NMD3P1-201ENST00000439704 CTHP32929 405 aa7.59□□□□□ -1.19
NMD3P1-201ENST00000439704 PCMTD1Q96MG8 357 aaPredicted RBP7.59□□□□□ -1.19
NMD3P1-201ENST00000439704 UNC93B1Q9H1C4 597 aa7.59□□□□□ -1.19
NMD3P1-201ENST00000439704 PER1O15534 1290 aaPredicted RBP7.58□□□□□ -1.2
NMD3P1-201ENST00000439704 F12P00748 615 aaPredicted RBP7.58□□□□□ -1.2
NMD3P1-201ENST00000439704 DGAT1O75907 488 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms