RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 C1orf167Q5SNV9 1468 aa15.07■□□□□ 0
MCF2L-216ENST00000439475 ASXL1Q8IXJ9 1541 aa15.07■□□□□ 0
MCF2L-216ENST00000439475 ESCO1Q5FWF5 840 aa15.06■□□□□ 0
MCF2L-216ENST00000439475 L3MBTL2Q969R5 705 aa15.05■□□□□ -0
MCF2L-216ENST00000439475 ORAI2Q96SN7 254 aa15.05■□□□□ -0
MCF2L-216ENST00000439475 PLEKHH1Q9ULM0 1364 aa15.05■□□□□ -0
MCF2L-216ENST00000439475 AHDC1Q5TGY3 1603 aaPredicted RBP15.05■□□□□ -0
MCF2L-216ENST00000439475 MED1Q15648 1581 aaPredicted RBP15.04■□□□□ -0
MCF2L-216ENST00000439475 DLC1Q96QB1 1528 aa15.04■□□□□ -0
MCF2L-216ENST00000439475 SAFB2Q14151 953 aaKnown RBP eCLIP15.04■□□□□ -0
MCF2L-216ENST00000439475 SPATA31A6Q5VVP1 1343 aa15.03■□□□□ -0
MCF2L-216ENST00000439475 NUTM2FA1L443 756 aa15.03■□□□□ -0
MCF2L-216ENST00000439475 CDC42BPGQ6DT37 1551 aa15.02■□□□□ -0
MCF2L-216ENST00000439475 ADGRB1O14514 1584 aa15.02□□□□□ -0.01
MCF2L-216ENST00000439475 NPHP3Q7Z494 1330 aa15.01□□□□□ -0.01
MCF2L-216ENST00000439475 COL16A1Q07092 1604 aaPredicted RBP15□□□□□ -0.01
MCF2L-216ENST00000439475 MEX3CQ5U5Q3 659 aaKnown RBP15□□□□□ -0.01
MCF2L-216ENST00000439475 KIAA1210Q9ULL0 1709 aa15□□□□□ -0.01
MCF2L-216ENST00000439475 DDX17Q92841 729 aaKnown RBP14.99□□□□□ -0.01
MCF2L-216ENST00000439475 NHSL1Q5SYE7 1610 aa14.99□□□□□ -0.01
MCF2L-216ENST00000439475 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
MCF2L-216ENST00000439475 SOS2Q07890 1332 aaPredicted RBP14.98□□□□□ -0.01
MCF2L-216ENST00000439475 MINK1Q8N4C8 1332 aaPredicted RBP14.98□□□□□ -0.01
MCF2L-216ENST00000439475 FOXO3O43524 673 aa14.98□□□□□ -0.01
MCF2L-216ENST00000439475 NBPF1Q3BBV0 1214 aa14.98□□□□□ -0.01
MCF2L-216ENST00000439475 TONSLQ96HA7 1378 aa14.98□□□□□ -0.01
MCF2L-216ENST00000439475 PHF8Q9UPP1 1060 aa14.97□□□□□ -0.01
MCF2L-216ENST00000439475 NUTM2BA6NNL0 878 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-216ENST00000439475 NUTM2EB1AL46 878 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-216ENST00000439475 WASLO00401 505 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-216ENST00000439475 PSME1Q06323 249 aa14.96□□□□□ -0.01
MCF2L-216ENST00000439475 ILDR2Q71H61 639 aa14.96□□□□□ -0.01
MCF2L-216ENST00000439475 NUTM2AQ8IVF1 878 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-216ENST00000439475 HIRIP3Q9BW71 556 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-216ENST00000439475 PCGF6Q9BYE7 350 aa14.96□□□□□ -0.01
MCF2L-216ENST00000439475 FMN2Q9NZ56 1722 aa14.96□□□□□ -0.01
MCF2L-216ENST00000439475 SHPRHQ149N8 1683 aa14.95□□□□□ -0.02
MCF2L-216ENST00000439475 KRT28Q7Z3Y7 464 aa14.94□□□□□ -0.02
MCF2L-216ENST00000439475 ANKARQ7Z5J8 1434 aa14.93□□□□□ -0.02
MCF2L-216ENST00000439475 ZNF772Q68DY9 489 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-216ENST00000439475 PNPLA6Q8IY17 1366 aa14.92□□□□□ -0.02
MCF2L-216ENST00000439475 KIF1AQ12756 1690 aa14.92□□□□□ -0.02
MCF2L-216ENST00000439475 CENPJQ9HC77 1338 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-216ENST00000439475 ADGRB2O60241 1585 aa14.91□□□□□ -0.02
MCF2L-216ENST00000439475 ROCK2O75116 1388 aaKnown RBP14.91□□□□□ -0.02
MCF2L-216ENST00000439475 XPCQ01831 940 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-216ENST00000439475 PMFBP1Q8TBY8 1022 aa14.91□□□□□ -0.02
MCF2L-216ENST00000439475 CDK19Q9BWU1 502 aa14.91□□□□□ -0.02
MCF2L-216ENST00000439475 ARHGEF28Q8N1W1 1705 aaKnown RBP14.91□□□□□ -0.02
MCF2L-216ENST00000439475 RGPD8O14715 1765 aaPredicted RBP14.9□□□□□ -0.02
MCF2L-216ENST00000439475 NGDNQ8NEJ9 315 aaKnown RBP14.9□□□□□ -0.02
MCF2L-216ENST00000439475 RGS17Q9UGC6 210 aaPredicted RBP14.9□□□□□ -0.02
MCF2L-216ENST00000439475 GPRASP1Q5JY77 1395 aa14.89□□□□□ -0.03
MCF2L-216ENST00000439475 NUDT16Q96DE0 195 aaKnown RBP14.89□□□□□ -0.03
MCF2L-216ENST00000439475 SOCS7O14512 581 aa14.88□□□□□ -0.03
MCF2L-216ENST00000439475 NBPF8Q3BBV2 869 aa14.88□□□□□ -0.03
MCF2L-216ENST00000439475 CCDC61Q9Y6R9 512 aa14.88□□□□□ -0.03
MCF2L-216ENST00000439475 SPATA31A3Q5VYP0 1347 aa14.88□□□□□ -0.03
MCF2L-216ENST00000439475 CLSPNQ9HAW4 1339 aa14.88□□□□□ -0.03
MCF2L-216ENST00000439475 TULP4Q9NRJ4 1543 aa14.87□□□□□ -0.03
MCF2L-216ENST00000439475 ADAMTS2O95450 1211 aa14.87□□□□□ -0.03
MCF2L-216ENST00000439475 SRPK2P78362 688 aaKnown RBP14.87□□□□□ -0.03
MCF2L-216ENST00000439475 LMOD2Q6P5Q4 547 aa14.87□□□□□ -0.03
MCF2L-216ENST00000439475 NGLY1Q96IV0 654 aa14.87□□□□□ -0.03
MCF2L-216ENST00000439475 C8orf37Q96NL8 207 aa14.87□□□□□ -0.03
MCF2L-216ENST00000439475 CARD11Q9BXL7 1154 aa14.87□□□□□ -0.03
MCF2L-216ENST00000439475 TRPM1Q7Z4N2 1603 aa14.87□□□□□ -0.03
MCF2L-216ENST00000439475 PXDNQ92626 1479 aa14.87□□□□□ -0.03
MCF2L-216ENST00000439475 LRP6O75581 1613 aa14.86□□□□□ -0.03
MCF2L-216ENST00000439475 HAP1P54257 671 aaPredicted RBP14.86□□□□□ -0.03
MCF2L-216ENST00000439475 TIMELESSQ9UNS1 1208 aa14.86□□□□□ -0.03
MCF2L-216ENST00000439475 PRR36Q9H6K5 1346 aa14.86□□□□□ -0.03
MCF2L-216ENST00000439475 SBNO1A3KN83 1393 aa14.85□□□□□ -0.03
MCF2L-216ENST00000439475 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
MCF2L-216ENST00000439475 EVC2Q86UK5 1308 aa14.85□□□□□ -0.03
MCF2L-216ENST00000439475 AFF2P51816 1311 aa14.84□□□□□ -0.03
MCF2L-216ENST00000439475 ARHGEF10O15013 1369 aa14.84□□□□□ -0.03
MCF2L-216ENST00000439475 USP32Q8NFA0 1604 aa14.83□□□□□ -0.04
MCF2L-216ENST00000439475 PLEKHG3A1L390 1219 aa14.82□□□□□ -0.04
MCF2L-216ENST00000439475 SLC24A1O60721 1099 aa14.82□□□□□ -0.04
MCF2L-216ENST00000439475 PAK3O75914 559 aaPredicted RBP14.82□□□□□ -0.04
MCF2L-216ENST00000439475 CCER1Q8TC90 406 aaPredicted RBP14.82□□□□□ -0.04
MCF2L-216ENST00000439475 CABP2Q9NPB3 220 aa14.82□□□□□ -0.04
MCF2L-216ENST00000439475 ITSN1Q15811 1721 aa14.82□□□□□ -0.04
MCF2L-216ENST00000439475 TNS3Q68CZ2 1445 aa14.82□□□□□ -0.04
MCF2L-216ENST00000439475 COL22A1Q8NFW1 1626 aaPredicted RBP14.81□□□□□ -0.04
MCF2L-216ENST00000439475 RXRBP28702 533 aa14.81□□□□□ -0.04
MCF2L-216ENST00000439475 QTRT2Q9H974 415 aaKnown RBP14.8□□□□□ -0.04
MCF2L-216ENST00000439475 USP21Q9UK80 565 aa14.8□□□□□ -0.04
MCF2L-216ENST00000439475 ATP7BP35670 1465 aa14.8□□□□□ -0.04
MCF2L-216ENST00000439475 QRICH2Q9H0J4 1663 aa14.8□□□□□ -0.04
MCF2L-216ENST00000439475 ACEP12821 1306 aa14.79□□□□□ -0.04
MCF2L-216ENST00000439475 RALGAPBQ86X10 1494 aa14.79□□□□□ -0.04
MCF2L-216ENST00000439475 FNBP4Q8N3X1 1017 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-216ENST00000439475 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
MCF2L-216ENST00000439475 TRPC5Q9UL62 973 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-216ENST00000439475 RBM6P78332 1123 aaKnown RBP14.77□□□□□ -0.05
MCF2L-216ENST00000439475 CABP1Q9NZU7 370 aa14.77□□□□□ -0.05
MCF2L-216ENST00000439475 PPIP5K1Q6PFW1 1433 aa14.76□□□□□ -0.05
MCF2L-216ENST00000439475 POLR3AO14802 1390 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms