RNA–Protein interactions for RNA: ENST00000437994.6

CD109-203, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,401 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-203ENST00000437994 NUP155O75694 1391 aa9.68□□□□□ -0.86
CD109-203ENST00000437994 POLR3GO15318 223 aaPredicted RBP9.68□□□□□ -0.86
CD109-203ENST00000437994 GTF2E1P29083 439 aaPredicted RBP9.67□□□□□ -0.86
CD109-203ENST00000437994 VPS37DQ86XT2 251 aa9.67□□□□□ -0.86
CD109-203ENST00000437994 PDCL2Q8N4E4 241 aa9.67□□□□□ -0.86
CD109-203ENST00000437994 PAK3O75914 559 aaPredicted RBP9.67□□□□□ -0.86
CD109-203ENST00000437994 SLC3A2P08195 630 aaKnown RBP9.67□□□□□ -0.86
CD109-203ENST00000437994 HSPA5P11021 654 aaKnown RBP9.67□□□□□ -0.86
CD109-203ENST00000437994 CCDC7Q96M83 1385 aa9.67□□□□□ -0.86
CD109-203ENST00000437994 CT47B1P0C2W7 299 aaPredicted RBP9.67□□□□□ -0.86
CD109-203ENST00000437994 SMC3Q9UQE7 1217 aa9.67□□□□□ -0.86
CD109-203ENST00000437994 GOLGA6L10A0A0M3HER8 536 aa9.67□□□□□ -0.86
CD109-203ENST00000437994 KIF2AO00139 706 aaPredicted RBP9.67□□□□□ -0.86
CD109-203ENST00000437994 CCDC91Q7Z6B0 441 aa9.66□□□□□ -0.86
CD109-203ENST00000437994 RILPL2Q969X0 211 aa9.66□□□□□ -0.86
CD109-203ENST00000437994 ANO2Q9NQ90 1003 aa9.66□□□□□ -0.86
CD109-203ENST00000437994 SPATA24Q86W54 205 aa9.66□□□□□ -0.86
CD109-203ENST00000437994 C9orf78Q9NZ63 289 aaPredicted RBP9.66□□□□□ -0.86
CD109-203ENST00000437994 EVC2Q86UK5 1308 aa9.66□□□□□ -0.86
CD109-203ENST00000437994 ZNF396Q96N95 335 aaPredicted RBP9.66□□□□□ -0.86
CD109-203ENST00000437994 SLC4A10Q6U841 1118 aa9.66□□□□□ -0.86
CD109-203ENST00000437994 HECW1Q76N89 1606 aa9.65□□□□□ -0.86
CD109-203ENST00000437994 RALYLQ86SE5 291 aaKnown RBP9.65□□□□□ -0.86
CD109-203ENST00000437994 IFIT2P09913 472 aaKnown RBP9.65□□□□□ -0.86
CD109-203ENST00000437994 MAP9Q49MG5 647 aa9.65□□□□□ -0.86
CD109-203ENST00000437994 NFXL1Q6ZNB6 911 aa9.65□□□□□ -0.86
CD109-203ENST00000437994 AMPHP49418 695 aa9.65□□□□□ -0.86
CD109-203ENST00000437994 PDS5BQ9NTI5 1447 aa9.65□□□□□ -0.86
CD109-203ENST00000437994 CNTLNQ9NXG0 1405 aa9.65□□□□□ -0.86
CD109-203ENST00000437994 RRBP1Q9P2E9 1410 aaKnown RBP9.65□□□□□ -0.87
CD109-203ENST00000437994 RRP9O43818 475 aaKnown RBP9.65□□□□□ -0.87
CD109-203ENST00000437994 ANKRD45Q5TZF3 282 aa9.65□□□□□ -0.87
CD109-203ENST00000437994 AXDND1Q5T1B0 1012 aaPredicted RBP9.64□□□□□ -0.87
CD109-203ENST00000437994 CBFA2T2O43439 604 aa9.64□□□□□ -0.87
CD109-203ENST00000437994 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
CD109-203ENST00000437994 ENOX2Q16206 610 aaKnown RBP9.64□□□□□ -0.87
CD109-203ENST00000437994 ITSN2Q9NZM3 1697 aa9.64□□□□□ -0.87
CD109-203ENST00000437994 PLEKHH2Q8IVE3 1493 aa9.64□□□□□ -0.87
CD109-203ENST00000437994 PPM1EQ8WY54 764 aa9.64□□□□□ -0.87
CD109-203ENST00000437994 HMGB2P26583 209 aaKnown RBP9.64□□□□□ -0.87
CD109-203ENST00000437994 ANKRD1Q15327 319 aa9.64□□□□□ -0.87
CD109-203ENST00000437994 PDE4AP27815 886 aa9.63□□□□□ -0.87
CD109-203ENST00000437994 ZNF330Q9Y3S2 320 aaPredicted RBP9.63□□□□□ -0.87
CD109-203ENST00000437994 TTC5Q8N0Z6 440 aa9.63□□□□□ -0.87
CD109-203ENST00000437994 CLASRPQ8N2M8 674 aaKnown RBP9.63□□□□□ -0.87
CD109-203ENST00000437994 API5Q9BZZ5 524 aaKnown RBP9.63□□□□□ -0.87
CD109-203ENST00000437994 STAC3Q96MF2 364 aa9.63□□□□□ -0.87
CD109-203ENST00000437994 PKD2Q13563 968 aa9.63□□□□□ -0.87
CD109-203ENST00000437994 STAMBPO95630 424 aa9.63□□□□□ -0.87
CD109-203ENST00000437994 CCAR1Q8IX12 1150 aaKnown RBP9.62□□□□□ -0.87
CD109-203ENST00000437994 SMG6Q86US8 1419 aaKnown RBP9.62□□□□□ -0.87
CD109-203ENST00000437994 HMGB1P09429 215 aaKnown RBP9.62□□□□□ -0.87
CD109-203ENST00000437994 NOL8Q76FK4 1167 aaKnown RBP9.62□□□□□ -0.87
CD109-203ENST00000437994 CDK5RAP3Q96JB5 506 aa9.62□□□□□ -0.87
CD109-203ENST00000437994 TSPY26PQ9H489 355 aa9.62□□□□□ -0.87
CD109-203ENST00000437994 GBP3Q9H0R5 595 aa9.62□□□□□ -0.87
CD109-203ENST00000437994 CCDC88BA6NC98 1476 aa9.61□□□□□ -0.87
CD109-203ENST00000437994 CNTROBQ8N137 903 aa9.61□□□□□ -0.87
CD109-203ENST00000437994 CWC22Q9HCG8 908 aaKnown RBP9.61□□□□□ -0.87
CD109-203ENST00000437994 CCDC192P0DO97 292 aa9.61□□□□□ -0.87
CD109-203ENST00000437994 HMGB1P1B2RPK0 211 aaPredicted RBP9.61□□□□□ -0.87
CD109-203ENST00000437994 G3BP1Q13283 466 aaKnown RBP eCLIP9.61□□□□□ -0.87
CD109-203ENST00000437994 USP47Q96K76 1375 aa9.61□□□□□ -0.87
CD109-203ENST00000437994 ZFYVE27Q5T4F4 411 aa9.61□□□□□ -0.87
CD109-203ENST00000437994 RAPGEF2Q9Y4G8 1499 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 LUZP1Q86V48 1076 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 LRRCC1Q9C099 1032 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 SIN3AQ96ST3 1273 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 MPHOSPH9Q99550 1183 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 COG3Q96JB2 828 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 KIF21AQ7Z4S6 1674 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 HSP90AB3PQ58FF7 597 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 AEBP1Q8IUX7 1158 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 CCDC112Q8NEF3 446 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 CFAP57Q96MR6 1250 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 TRIM5Q9C035 493 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 MICALCLQ6ZW33 695 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 IL27Q8NEV9 243 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 SDF4Q9BRK5 362 aa9.6□□□□□ -0.87
CD109-203ENST00000437994 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
CD109-203ENST00000437994 CCDC181Q5TID7 509 aa9.59□□□□□ -0.87
CD109-203ENST00000437994 ERC1Q8IUD2 1116 aa9.59□□□□□ -0.87
CD109-203ENST00000437994 SOX12O15370 315 aa9.59□□□□□ -0.87
CD109-203ENST00000437994 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
CD109-203ENST00000437994 PPFIBP1Q86W92 1011 aa9.59□□□□□ -0.87
CD109-203ENST00000437994 PKNOX2Q96KN3 472 aa9.59□□□□□ -0.87
CD109-203ENST00000437994 FYCO1Q9BQS8 1478 aa9.59□□□□□ -0.87
CD109-203ENST00000437994 RBM33Q96EV2 1170 aaKnown RBP9.59□□□□□ -0.87
CD109-203ENST00000437994 SEPT11Q9NVA2 429 aaKnown RBP9.59□□□□□ -0.87
CD109-203ENST00000437994 PDILTQ8N807 584 aa9.58□□□□□ -0.88
CD109-203ENST00000437994 NGDNQ8NEJ9 315 aaKnown RBP9.58□□□□□ -0.88
CD109-203ENST00000437994 ANKRD18BA2A2Z9 1011 aa9.58□□□□□ -0.88
CD109-203ENST00000437994 CDKL5O76039 1030 aa9.58□□□□□ -0.88
CD109-203ENST00000437994 EFCAB2Q5VUJ9 269 aa9.58□□□□□ -0.88
CD109-203ENST00000437994 GIMAP7Q8NHV1 300 aa9.58□□□□□ -0.88
CD109-203ENST00000437994 DDX12PQ92771 950 aa9.58□□□□□ -0.88
CD109-203ENST00000437994 TEFQ10587 303 aa9.58□□□□□ -0.88
CD109-203ENST00000437994 PLEKHH1Q9ULM0 1364 aa9.58□□□□□ -0.88
CD109-203ENST00000437994 CDC45O75419 566 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms