RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 RGS17Q9UGC6 210 aaPredicted RBP26.65■■□□□ 1.86
HMGN1-207ENST00000436324 SOCS7O14512 581 aa26.64■■□□□ 1.86
HMGN1-207ENST00000436324 SIRT1Q96EB6 747 aa26.63■■□□□ 1.85
HMGN1-207ENST00000436324 KNDC1Q76NI1 1749 aa26.62■■□□□ 1.85
HMGN1-207ENST00000436324 LAMC1P11047 1609 aa26.62■■□□□ 1.85
HMGN1-207ENST00000436324 ESCO1Q5FWF5 840 aa26.62■■□□□ 1.85
HMGN1-207ENST00000436324 STAC3Q96MF2 364 aa26.62■■□□□ 1.85
HMGN1-207ENST00000436324 PRAM1Q96QH2 718 aa26.62■■□□□ 1.85
HMGN1-207ENST00000436324 NUTM2BA6NNL0 878 aaPredicted RBP26.61■■□□□ 1.85
HMGN1-207ENST00000436324 NUTM2EB1AL46 878 aaPredicted RBP26.61■■□□□ 1.85
HMGN1-207ENST00000436324 NUTM2AQ8IVF1 878 aaPredicted RBP26.61■■□□□ 1.85
HMGN1-207ENST00000436324 LRRC59Q96AG4 307 aaKnown RBP26.61■■□□□ 1.85
HMGN1-207ENST00000436324 TRAK1Q9UPV9 953 aa26.61■■□□□ 1.85
HMGN1-207ENST00000436324 SPATA31A6Q5VVP1 1343 aa26.61■■□□□ 1.85
HMGN1-207ENST00000436324 MEX3CQ5U5Q3 659 aaKnown RBP26.6■■□□□ 1.85
HMGN1-207ENST00000436324 POGKQ9P215 609 aa26.6■■□□□ 1.85
HMGN1-207ENST00000436324 NHSL1Q5SYE7 1610 aa26.6■■□□□ 1.85
HMGN1-207ENST00000436324 CDC42BPGQ6DT37 1551 aa26.59■■□□□ 1.85
HMGN1-207ENST00000436324 LRP6O75581 1613 aa26.57■■□□□ 1.84
HMGN1-207ENST00000436324 ADGRB1O14514 1584 aa26.55■■□□□ 1.84
HMGN1-207ENST00000436324 SHPRHQ149N8 1683 aa26.54■■□□□ 1.84
HMGN1-207ENST00000436324 POTEAQ6S8J7 498 aa26.54■■□□□ 1.84
HMGN1-207ENST00000436324 SIN3AQ96ST3 1273 aa26.54■■□□□ 1.84
HMGN1-207ENST00000436324 FOXO3O43524 673 aa26.52■■□□□ 1.84
HMGN1-207ENST00000436324 XPCQ01831 940 aaPredicted RBP26.52■■□□□ 1.84
HMGN1-207ENST00000436324 SOS2Q07890 1332 aaPredicted RBP26.52■■□□□ 1.84
HMGN1-207ENST00000436324 PNPLA6Q8IY17 1366 aa26.52■■□□□ 1.84
HMGN1-207ENST00000436324 DLC1Q96QB1 1528 aa26.51■■□□□ 1.83
HMGN1-207ENST00000436324 NEUROD1Q13562 356 aa26.51■■□□□ 1.83
HMGN1-207ENST00000436324 NPHP3Q7Z494 1330 aa26.5■■□□□ 1.83
HMGN1-207ENST00000436324 HIRIP3Q9BW71 556 aaPredicted RBP26.5■■□□□ 1.83
HMGN1-207ENST00000436324 MINK1Q8N4C8 1332 aaPredicted RBP26.49■■□□□ 1.83
HMGN1-207ENST00000436324 TRIM26Q12899 539 aaPredicted RBP26.49■■□□□ 1.83
HMGN1-207ENST00000436324 FMN2Q9NZ56 1722 aa26.47■■□□□ 1.83
HMGN1-207ENST00000436324 L3MBTL2Q969R5 705 aa26.46■■□□□ 1.83
HMGN1-207ENST00000436324 NBPF1Q3BBV0 1214 aa26.44■■□□□ 1.82
HMGN1-207ENST00000436324 ADAMTS2O95450 1211 aa26.43■■□□□ 1.82
HMGN1-207ENST00000436324 PHF8Q9UPP1 1060 aa26.43■■□□□ 1.82
HMGN1-207ENST00000436324 C8orf37Q96NL8 207 aa26.41■■□□□ 1.82
HMGN1-207ENST00000436324 PXDNQ92626 1479 aa26.41■■□□□ 1.82
HMGN1-207ENST00000436324 ZNF772Q68DY9 489 aaPredicted RBP26.4■■□□□ 1.82
HMGN1-207ENST00000436324 KRT28Q7Z3Y7 464 aa26.4■■□□□ 1.82
HMGN1-207ENST00000436324 PMFBP1Q8TBY8 1022 aa26.39■■□□□ 1.82
HMGN1-207ENST00000436324 AFF2P51816 1311 aa26.39■■□□□ 1.81
HMGN1-207ENST00000436324 WASLO00401 505 aaPredicted RBP26.38■■□□□ 1.81
HMGN1-207ENST00000436324 RGPD8O14715 1765 aaPredicted RBP26.35■■□□□ 1.81
HMGN1-207ENST00000436324 ADGRB2O60241 1585 aa26.35■■□□□ 1.81
HMGN1-207ENST00000436324 KIF1AQ12756 1690 aa26.34■■□□□ 1.81
HMGN1-207ENST00000436324 ANKARQ7Z5J8 1434 aa26.34■■□□□ 1.81
HMGN1-207ENST00000436324 PSME1Q06323 249 aa26.34■■□□□ 1.81
HMGN1-207ENST00000436324 NGLY1Q96IV0 654 aa26.34■■□□□ 1.81
HMGN1-207ENST00000436324 PRR36Q9H6K5 1346 aa26.34■■□□□ 1.81
HMGN1-207ENST00000436324 ARHGEF28Q8N1W1 1705 aaKnown RBP26.34■■□□□ 1.81
HMGN1-207ENST00000436324 KIAA1210Q9ULL0 1709 aa26.33■■□□□ 1.81
HMGN1-207ENST00000436324 SPATA31A3Q5VYP0 1347 aa26.33■■□□□ 1.81
HMGN1-207ENST00000436324 PLEKHG5O94827 1062 aa26.32■■□□□ 1.8
HMGN1-207ENST00000436324 USP32Q8NFA0 1604 aa26.31■■□□□ 1.8
HMGN1-207ENST00000436324 EIF3AQ14152 1382 aaKnown RBP26.31■■□□□ 1.8
HMGN1-207ENST00000436324 LMOD2Q6P5Q4 547 aa26.3■■□□□ 1.8
HMGN1-207ENST00000436324 CDK19Q9BWU1 502 aa26.29■■□□□ 1.8
HMGN1-207ENST00000436324 TULP4Q9NRJ4 1543 aa26.29■■□□□ 1.8
HMGN1-207ENST00000436324 RXRBP28702 533 aa26.27■■□□□ 1.8
HMGN1-207ENST00000436324 NUDT16Q96DE0 195 aaKnown RBP26.27■■□□□ 1.8
HMGN1-207ENST00000436324 QTRT2Q9H974 415 aaKnown RBP26.27■■□□□ 1.8
HMGN1-207ENST00000436324 COL22A1Q8NFW1 1626 aaPredicted RBP26.27■■□□□ 1.8
HMGN1-207ENST00000436324 NGDNQ8NEJ9 315 aaKnown RBP26.26■■□□□ 1.79
HMGN1-207ENST00000436324 TNS3Q68CZ2 1445 aa26.24■■□□□ 1.79
HMGN1-207ENST00000436324 CENPJQ9HC77 1338 aaPredicted RBP26.24■■□□□ 1.79
HMGN1-207ENST00000436324 SBNO1A3KN83 1393 aa26.23■■□□□ 1.79
HMGN1-207ENST00000436324 HAP1P54257 671 aaPredicted RBP26.23■■□□□ 1.79
HMGN1-207ENST00000436324 NBPF8Q3BBV2 869 aa26.23■■□□□ 1.79
HMGN1-207ENST00000436324 CABLES1Q8TDN4 633 aa26.23■■□□□ 1.79
HMGN1-207ENST00000436324 USP21Q9UK80 565 aa26.23■■□□□ 1.79
HMGN1-207ENST00000436324 GPRASP1Q5JY77 1395 aa26.22■■□□□ 1.79
HMGN1-207ENST00000436324 ROCK2O75116 1388 aaKnown RBP26.21■■□□□ 1.79
HMGN1-207ENST00000436324 TONSLQ96HA7 1378 aa26.2■■□□□ 1.78
HMGN1-207ENST00000436324 ATP7BP35670 1465 aa26.19■■□□□ 1.78
HMGN1-207ENST00000436324 FNBP4Q8N3X1 1017 aaPredicted RBP26.19■■□□□ 1.78
HMGN1-207ENST00000436324 PAK3O75914 559 aaPredicted RBP26.18■■□□□ 1.78
HMGN1-207ENST00000436324 SRPK2P78362 688 aaKnown RBP26.18■■□□□ 1.78
HMGN1-207ENST00000436324 ARHGEF10O15013 1369 aa26.18■■□□□ 1.78
HMGN1-207ENST00000436324 TRPM1Q7Z4N2 1603 aa26.17■■□□□ 1.78
HMGN1-207ENST00000436324 CABP2Q9NPB3 220 aa26.17■■□□□ 1.78
HMGN1-207ENST00000436324 RBM6P78332 1123 aaKnown RBP26.16■■□□□ 1.78
HMGN1-207ENST00000436324 CCDC61Q9Y6R9 512 aa26.15■■□□□ 1.78
HMGN1-207ENST00000436324 TRPC5Q9UL62 973 aaPredicted RBP26.14■■□□□ 1.78
HMGN1-207ENST00000436324 ACEP12821 1306 aa26.13■■□□□ 1.77
HMGN1-207ENST00000436324 TRPM3Q9HCF6 1732 aaPredicted RBP26.11■■□□□ 1.77
HMGN1-207ENST00000436324 QRICH2Q9H0J4 1663 aa26.1■■□□□ 1.77
HMGN1-207ENST00000436324 ITSN1Q15811 1721 aa26.1■■□□□ 1.77
HMGN1-207ENST00000436324 BCL9LQ86UU0 1499 aa26.1■■□□□ 1.77
HMGN1-207ENST00000436324 PLEKHG3A1L390 1219 aa26.09■■□□□ 1.77
HMGN1-207ENST00000436324 CARD11Q9BXL7 1154 aa26.09■■□□□ 1.77
HMGN1-207ENST00000436324 MARF1Q9Y4F3 1742 aaKnown RBP26.08■■□□□ 1.77
HMGN1-207ENST00000436324 ATRNO75882 1429 aa26.08■■□□□ 1.77
HMGN1-207ENST00000436324 CDK12Q9NYV4 1490 aaPredicted RBP26.08■■□□□ 1.77
HMGN1-207ENST00000436324 NUTM2GQ5VZR2 741 aa26.07■■□□□ 1.76
HMGN1-207ENST00000436324 PCGF6Q9BYE7 350 aa26.07■■□□□ 1.76
HMGN1-207ENST00000436324 EVC2Q86UK5 1308 aa26.07■■□□□ 1.76
HMGN1-207ENST00000436324 POLR3AO14802 1390 aaPredicted RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms