RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.47□□□□□ -1.21
CHD8-202ENST00000430710 CDC45O75419 566 aa7.47□□□□□ -1.21
CHD8-202ENST00000430710 STRN4Q9NRL3 753 aa7.47□□□□□ -1.21
CHD8-202ENST00000430710 MIA2Q96PC5 1412 aa7.47□□□□□ -1.21
CHD8-202ENST00000430710 CCDC73Q6ZRK6 1079 aa7.47□□□□□ -1.21
CHD8-202ENST00000430710 RNF214Q8ND24 703 aa7.47□□□□□ -1.21
CHD8-202ENST00000430710 LRRFIP1Q32MZ4 808 aaKnown RBP7.47□□□□□ -1.21
CHD8-202ENST00000430710 API5Q9BZZ5 524 aaKnown RBP7.47□□□□□ -1.21
CHD8-202ENST00000430710 CIZ1Q9ULV3 898 aaPredicted RBP7.47□□□□□ -1.21
CHD8-202ENST00000430710 NINLQ9Y2I6 1382 aa7.47□□□□□ -1.21
CHD8-202ENST00000430710 CHMP3Q9Y3E7 222 aa7.47□□□□□ -1.21
CHD8-202ENST00000430710 AKNAQ7Z591 1439 aa7.47□□□□□ -1.21
CHD8-202ENST00000430710 KIF7Q2M1P5 1343 aa7.47□□□□□ -1.21
CHD8-202ENST00000430710 DCTN1Q14203 1278 aa7.46□□□□□ -1.21
CHD8-202ENST00000430710 RRP12Q5JTH9 1297 aaKnown RBP7.46□□□□□ -1.22
CHD8-202ENST00000430710 ZSCAN30Q86W11 494 aa7.46□□□□□ -1.22
CHD8-202ENST00000430710 RABEP1Q15276 862 aa7.46□□□□□ -1.22
CHD8-202ENST00000430710 CCDC191Q8NCU4 936 aa7.46□□□□□ -1.22
CHD8-202ENST00000430710 TSPYL1Q9H0U9 437 aa7.46□□□□□ -1.22
CHD8-202ENST00000430710 MCM4P33991 863 aa7.46□□□□□ -1.22
CHD8-202ENST00000430710 TRIM5Q9C035 493 aa7.46□□□□□ -1.22
CHD8-202ENST00000430710 LNPKQ9C0E8 428 aa7.46□□□□□ -1.22
CHD8-202ENST00000430710 VPS37CA5D8V6 355 aaPredicted RBP7.46□□□□□ -1.22
CHD8-202ENST00000430710 RUNDC1Q96C34 613 aa7.46□□□□□ -1.22
CHD8-202ENST00000430710 ANO2Q9NQ90 1003 aa7.46□□□□□ -1.22
CHD8-202ENST00000430710 TDRD9Q8NDG6 1382 aaKnown RBP7.46□□□□□ -1.22
CHD8-202ENST00000430710 TAF7LQ5H9L4 462 aa7.45□□□□□ -1.22
CHD8-202ENST00000430710 USP8P40818 1118 aa7.45□□□□□ -1.22
CHD8-202ENST00000430710 PATL2C9JE40 543 aaKnown RBP7.45□□□□□ -1.22
CHD8-202ENST00000430710 TRIM29Q14134 588 aa7.45□□□□□ -1.22
CHD8-202ENST00000430710 SAMD1Q6SPF0 538 aaPredicted RBP7.45□□□□□ -1.22
CHD8-202ENST00000430710 FHOD3Q2V2M9 1422 aa7.45□□□□□ -1.22
CHD8-202ENST00000430710 KIF3BO15066 747 aa7.45□□□□□ -1.22
CHD8-202ENST00000430710 PDE3AQ14432 1141 aa7.45□□□□□ -1.22
CHD8-202ENST00000430710 KIF21BO75037 1637 aa7.44□□□□□ -1.22
CHD8-202ENST00000430710 AKAP17AQ02040 695 aaKnown RBP7.44□□□□□ -1.22
CHD8-202ENST00000430710 CCDC112Q8NEF3 446 aa7.44□□□□□ -1.22
CHD8-202ENST00000430710 PRPF40AO75400 957 aaKnown RBP7.44□□□□□ -1.22
CHD8-202ENST00000430710 CCDC47Q96A33 483 aaKnown RBP7.44□□□□□ -1.22
CHD8-202ENST00000430710 KAT6BQ8WYB5 2073 aa7.44□□□□□ -1.22
CHD8-202ENST00000430710 PDCP20941 246 aa7.43□□□□□ -1.22
CHD8-202ENST00000430710 OLFM4Q6UX06 510 aa7.43□□□□□ -1.22
CHD8-202ENST00000430710 DEF6Q9H4E7 631 aa7.43□□□□□ -1.22
CHD8-202ENST00000430710 DISP3Q9P2K9 1392 aa7.43□□□□□ -1.22
CHD8-202ENST00000430710 SYNE3Q6ZMZ3 975 aa7.43□□□□□ -1.22
CHD8-202ENST00000430710 PANK1Q8TE04 598 aa7.43□□□□□ -1.22
CHD8-202ENST00000430710 PSME1Q06323 249 aa7.43□□□□□ -1.22
CHD8-202ENST00000430710 PCMTD1Q96MG8 357 aaPredicted RBP7.43□□□□□ -1.22
CHD8-202ENST00000430710 CCDC192P0DO97 292 aa7.43□□□□□ -1.22
CHD8-202ENST00000430710 CAPN15O75808 1086 aa7.43□□□□□ -1.22
CHD8-202ENST00000430710 EIF3JO75822 258 aaKnown RBP7.43□□□□□ -1.22
CHD8-202ENST00000430710 K7ELQ4 463 aaPredicted RBP7.42□□□□□ -1.22
CHD8-202ENST00000430710 AMPHP49418 695 aa7.42□□□□□ -1.22
CHD8-202ENST00000430710 NUTM2GQ5VZR2 741 aa7.42□□□□□ -1.22
CHD8-202ENST00000430710 CPLX1O14810 134 aa7.42□□□□□ -1.22
CHD8-202ENST00000430710 RAD21O60216 631 aa7.42□□□□□ -1.22
CHD8-202ENST00000430710 PRM3Q9NNZ6 103 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 TOMM22Q9NS69 142 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 KINO60870 393 aaKnown RBP7.41□□□□□ -1.22
CHD8-202ENST00000430710 CALCOCO1Q9P1Z2 691 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 PDZRN3Q9UPQ7 1066 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 SDF4Q9BRK5 362 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 ERC2O15083 957 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 KIAA0754O94854 1291 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 PSMA5P28066 241 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 PROSER2Q86WR7 435 aaPredicted RBP7.41□□□□□ -1.22
CHD8-202ENST00000430710 WDR70Q9NW82 654 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 EVC2Q86UK5 1308 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 RUSC2Q8N2Y8 1516 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 HNRNPMP52272 730 aaKnown RBP eCLIP7.41□□□□□ -1.22
CHD8-202ENST00000430710 PDE4CQ08493 712 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 HSP90AB4PQ58FF6 505 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 SPC24Q8NBT2 197 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 MYO6Q9UM54 1294 aa7.41□□□□□ -1.22
CHD8-202ENST00000430710 WDR97A6NE52 1622 aa7.4□□□□□ -1.22
CHD8-202ENST00000430710 ZMYND15Q9H091 742 aa7.4□□□□□ -1.22
CHD8-202ENST00000430710 IFIT2P09913 472 aaKnown RBP7.4□□□□□ -1.22
CHD8-202ENST00000430710 CAGE1Q8TC20 777 aa7.4□□□□□ -1.22
CHD8-202ENST00000430710 GCC1Q96CN9 775 aa7.4□□□□□ -1.22
CHD8-202ENST00000430710 ELL2O00472 640 aaPredicted RBP7.4□□□□□ -1.22
CHD8-202ENST00000430710 WDR33Q9C0J8 1336 aaKnown RBP7.4□□□□□ -1.22
CHD8-202ENST00000430710 FGD6Q6ZV73 1430 aa7.4□□□□□ -1.22
CHD8-202ENST00000430710 RRBP1Q9P2E9 1410 aaKnown RBP7.4□□□□□ -1.22
CHD8-202ENST00000430710 ERLIN1O75477 346 aa7.4□□□□□ -1.22
CHD8-202ENST00000430710 SMARCE1Q969G3 411 aa7.4□□□□□ -1.22
CHD8-202ENST00000430710 RIPK4P57078 832 aa7.4□□□□□ -1.23
CHD8-202ENST00000430710 RBM33Q96EV2 1170 aaKnown RBP7.4□□□□□ -1.23
CHD8-202ENST00000430710 LRRC9Q6ZRR7 1453 aa7.4□□□□□ -1.23
CHD8-202ENST00000430710 MARCH6O60337 910 aa7.4□□□□□ -1.23
CHD8-202ENST00000430710 CT47B1P0C2W7 299 aaPredicted RBP7.4□□□□□ -1.23
CHD8-202ENST00000430710 PDILTQ8N807 584 aa7.39□□□□□ -1.23
CHD8-202ENST00000430710 ECM2O94769 699 aaPredicted RBP7.39□□□□□ -1.23
CHD8-202ENST00000430710 SMC2O95347 1197 aa7.39□□□□□ -1.23
CHD8-202ENST00000430710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.39□□□□□ -1.237e-6■■■■□ 19.6
CHD8-202ENST00000430710 NGLY1Q96IV0 654 aa7.39□□□□□ -1.23
CHD8-202ENST00000430710 KIF2AO00139 706 aaPredicted RBP7.39□□□□□ -1.23
CHD8-202ENST00000430710 NEK4P51957 841 aa7.39□□□□□ -1.23
CHD8-202ENST00000430710 BCL11BQ9C0K0 894 aaPredicted RBP7.39□□□□□ -1.23
CHD8-202ENST00000430710 PRDM2Q13029 1718 aa7.39□□□□□ -1.23
CHD8-202ENST00000430710 DYNC1I1O14576 645 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms