RNA–Protein interactions for RNA: ENST00000430433.5

MRPL55-221, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-221ENST00000430433 NHSL1Q5SYE7 1610 aa16.46■□□□□ 0.23
MRPL55-221ENST00000430433 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
MRPL55-221ENST00000430433 DDX17Q92841 729 aaKnown RBP16.46■□□□□ 0.23
MRPL55-221ENST00000430433 SIRT1Q96EB6 747 aa16.46■□□□□ 0.23
MRPL55-221ENST00000430433 ORAI2Q96SN7 254 aa16.46■□□□□ 0.23
MRPL55-221ENST00000430433 SAFB2Q14151 953 aaKnown RBP eCLIP16.45■□□□□ 0.22
MRPL55-221ENST00000430433 PRAM1Q96QH2 718 aa16.45■□□□□ 0.22
MRPL55-221ENST00000430433 POGKQ9P215 609 aa16.45■□□□□ 0.22
MRPL55-221ENST00000430433 ADGRB1O14514 1584 aa16.45■□□□□ 0.22
MRPL55-221ENST00000430433 NUTM2FA1L443 756 aa16.44■□□□□ 0.22
MRPL55-221ENST00000430433 DLC1Q96QB1 1528 aa16.44■□□□□ 0.22
MRPL55-221ENST00000430433 SPATA31A6Q5VVP1 1343 aa16.44■□□□□ 0.22
MRPL55-221ENST00000430433 SHPRHQ149N8 1683 aa16.43■□□□□ 0.22
MRPL55-221ENST00000430433 ESCO1Q5FWF5 840 aa16.43■□□□□ 0.22
MRPL55-221ENST00000430433 LRRC59Q96AG4 307 aaKnown RBP16.43■□□□□ 0.22
MRPL55-221ENST00000430433 TRAK1Q9UPV9 953 aa16.43■□□□□ 0.22
MRPL55-221ENST00000430433 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
MRPL55-221ENST00000430433 FMN2Q9NZ56 1722 aa16.41■□□□□ 0.22
MRPL55-221ENST00000430433 SIN3AQ96ST3 1273 aa16.4■□□□□ 0.22
MRPL55-221ENST00000430433 LRP6O75581 1613 aa16.39■□□□□ 0.21
MRPL55-221ENST00000430433 NUTM2BA6NNL0 878 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-221ENST00000430433 NUTM2EB1AL46 878 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-221ENST00000430433 NEUROD1Q13562 356 aa16.39■□□□□ 0.21
MRPL55-221ENST00000430433 NUTM2AQ8IVF1 878 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-221ENST00000430433 NPHP3Q7Z494 1330 aa16.39■□□□□ 0.21
MRPL55-221ENST00000430433 SOS2Q07890 1332 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-221ENST00000430433 PNPLA6Q8IY17 1366 aa16.38■□□□□ 0.21
MRPL55-221ENST00000430433 SOCS7O14512 581 aa16.37■□□□□ 0.21
MRPL55-221ENST00000430433 FOXO3O43524 673 aa16.37■□□□□ 0.21
MRPL55-221ENST00000430433 RGS17Q9UGC6 210 aaPredicted RBP16.37■□□□□ 0.21
MRPL55-221ENST00000430433 MINK1Q8N4C8 1332 aaPredicted RBP16.37■□□□□ 0.21
MRPL55-221ENST00000430433 KIAA1210Q9ULL0 1709 aa16.36■□□□□ 0.21
MRPL55-221ENST00000430433 L3MBTL2Q969R5 705 aa16.36■□□□□ 0.21
MRPL55-221ENST00000430433 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-221ENST00000430433 ADGRB2O60241 1585 aa16.35■□□□□ 0.21
MRPL55-221ENST00000430433 XPCQ01831 940 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-221ENST00000430433 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
MRPL55-221ENST00000430433 ARHGEF28Q8N1W1 1705 aaKnown RBP16.33■□□□□ 0.21
MRPL55-221ENST00000430433 NBPF1Q3BBV0 1214 aa16.33■□□□□ 0.2
MRPL55-221ENST00000430433 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.2
MRPL55-221ENST00000430433 EIF3AQ14152 1382 aaKnown RBP16.33■□□□□ 0.2
MRPL55-221ENST00000430433 PXDNQ92626 1479 aa16.33■□□□□ 0.2
MRPL55-221ENST00000430433 POTEAQ6S8J7 498 aa16.32■□□□□ 0.2
MRPL55-221ENST00000430433 ANKARQ7Z5J8 1434 aa16.32■□□□□ 0.2
MRPL55-221ENST00000430433 RGPD8O14715 1765 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-221ENST00000430433 WASLO00401 505 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-221ENST00000430433 ADAMTS2O95450 1211 aa16.29■□□□□ 0.2
MRPL55-221ENST00000430433 ZNF772Q68DY9 489 aaPredicted RBP16.29■□□□□ 0.2
MRPL55-221ENST00000430433 C8orf37Q96NL8 207 aa16.29■□□□□ 0.2
MRPL55-221ENST00000430433 USP32Q8NFA0 1604 aa16.29■□□□□ 0.2
MRPL55-221ENST00000430433 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
MRPL55-221ENST00000430433 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
MRPL55-221ENST00000430433 AFF2P51816 1311 aa16.27■□□□□ 0.2
MRPL55-221ENST00000430433 PSME1Q06323 249 aa16.27■□□□□ 0.2
MRPL55-221ENST00000430433 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
MRPL55-221ENST00000430433 COL22A1Q8NFW1 1626 aaPredicted RBP16.27■□□□□ 0.19
MRPL55-221ENST00000430433 TONSLQ96HA7 1378 aa16.26■□□□□ 0.19
MRPL55-221ENST00000430433 PRR36Q9H6K5 1346 aa16.26■□□□□ 0.19
MRPL55-221ENST00000430433 ROCK2O75116 1388 aaKnown RBP16.26■□□□□ 0.19
MRPL55-221ENST00000430433 SPATA31A3Q5VYP0 1347 aa16.25■□□□□ 0.19
MRPL55-221ENST00000430433 CENPJQ9HC77 1338 aaPredicted RBP16.25■□□□□ 0.19
MRPL55-221ENST00000430433 NGLY1Q96IV0 654 aa16.25■□□□□ 0.19
MRPL55-221ENST00000430433 TRPM1Q7Z4N2 1603 aa16.25■□□□□ 0.19
MRPL55-221ENST00000430433 LMOD2Q6P5Q4 547 aa16.24■□□□□ 0.19
MRPL55-221ENST00000430433 CDK19Q9BWU1 502 aa16.24■□□□□ 0.19
MRPL55-221ENST00000430433 TNS3Q68CZ2 1445 aa16.24■□□□□ 0.19
MRPL55-221ENST00000430433 GPRASP1Q5JY77 1395 aa16.24■□□□□ 0.19
MRPL55-221ENST00000430433 NGDNQ8NEJ9 315 aaKnown RBP16.23■□□□□ 0.19
MRPL55-221ENST00000430433 SBNO1A3KN83 1393 aa16.23■□□□□ 0.19
MRPL55-221ENST00000430433 ATP7BP35670 1465 aa16.22■□□□□ 0.19
MRPL55-221ENST00000430433 NUDT16Q96DE0 195 aaKnown RBP16.22■□□□□ 0.19
MRPL55-221ENST00000430433 ITSN1Q15811 1721 aa16.22■□□□□ 0.19
MRPL55-221ENST00000430433 PLEKHG5O94827 1062 aa16.21■□□□□ 0.19
MRPL55-221ENST00000430433 HAP1P54257 671 aaPredicted RBP16.21■□□□□ 0.19
MRPL55-221ENST00000430433 NBPF8Q3BBV2 869 aa16.21■□□□□ 0.19
MRPL55-221ENST00000430433 QRICH2Q9H0J4 1663 aa16.21■□□□□ 0.18
MRPL55-221ENST00000430433 SRPK2P78362 688 aaKnown RBP16.2■□□□□ 0.18
MRPL55-221ENST00000430433 ARHGEF10O15013 1369 aa16.2■□□□□ 0.18
MRPL55-221ENST00000430433 RXRBP28702 533 aa16.19■□□□□ 0.18
MRPL55-221ENST00000430433 PCGF6Q9BYE7 350 aa16.18■□□□□ 0.18
MRPL55-221ENST00000430433 USP21Q9UK80 565 aa16.18■□□□□ 0.18
MRPL55-221ENST00000430433 CCDC61Q9Y6R9 512 aa16.18■□□□□ 0.18
MRPL55-221ENST00000430433 PAK3O75914 559 aaPredicted RBP16.17■□□□□ 0.18
MRPL55-221ENST00000430433 CABLES1Q8TDN4 633 aa16.17■□□□□ 0.18
MRPL55-221ENST00000430433 QTRT2Q9H974 415 aaKnown RBP16.17■□□□□ 0.18
MRPL55-221ENST00000430433 TRPM3Q9HCF6 1732 aaPredicted RBP16.16■□□□□ 0.18
MRPL55-221ENST00000430433 MARF1Q9Y4F3 1742 aaKnown RBP16.16■□□□□ 0.18
MRPL55-221ENST00000430433 TOPAZ1Q8N9V7 1692 aa16.16■□□□□ 0.18
MRPL55-221ENST00000430433 CABP2Q9NPB3 220 aa16.16■□□□□ 0.18
MRPL55-221ENST00000430433 FNBP4Q8N3X1 1017 aaPredicted RBP16.15■□□□□ 0.18
MRPL55-221ENST00000430433 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
MRPL55-221ENST00000430433 RALGAPBQ86X10 1494 aa16.15■□□□□ 0.18
MRPL55-221ENST00000430433 RBM6P78332 1123 aaKnown RBP16.14■□□□□ 0.17
MRPL55-221ENST00000430433 ACEP12821 1306 aa16.14■□□□□ 0.17
MRPL55-221ENST00000430433 EVC2Q86UK5 1308 aa16.14■□□□□ 0.17
MRPL55-221ENST00000430433 PPIP5K1Q6PFW1 1433 aa16.13■□□□□ 0.17
MRPL55-221ENST00000430433 PLEKHG3A1L390 1219 aa16.13■□□□□ 0.17
MRPL55-221ENST00000430433 TRPC5Q9UL62 973 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-221ENST00000430433 ALS2Q96Q42 1657 aa16.13■□□□□ 0.17
MRPL55-221ENST00000430433 POLR3AO14802 1390 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms