RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 SPATA31A6Q5VVP1 1343 aa13.11□□□□□ -0.31
LINC00963-204ENST00000427778 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
LINC00963-204ENST00000427778 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
LINC00963-204ENST00000427778 ZNF326Q5BKZ1 582 aaKnown RBP13.09□□□□□ -0.31
LINC00963-204ENST00000427778 PRAG1Q86YV5 1406 aa13.09□□□□□ -0.31
LINC00963-204ENST00000427778 PROSER2Q86WR7 435 aaPredicted RBP13.08□□□□□ -0.32
LINC00963-204ENST00000427778 RBM33Q96EV2 1170 aaKnown RBP13.08□□□□□ -0.32
LINC00963-204ENST00000427778 BCANQ96GW7 911 aa13.08□□□□□ -0.32
LINC00963-204ENST00000427778 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
LINC00963-204ENST00000427778 PTPRUQ92729 1446 aa13.06□□□□□ -0.32
LINC00963-204ENST00000427778 VGFO15240 615 aaPredicted RBP13.06□□□□□ -0.32
LINC00963-204ENST00000427778 NHSL1Q5SYE7 1610 aa13.06□□□□□ -0.32
LINC00963-204ENST00000427778 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
LINC00963-204ENST00000427778 RGS12O14924 1447 aa13.05□□□□□ -0.32
LINC00963-204ENST00000427778 RXRBP28702 533 aa13.05□□□□□ -0.32
LINC00963-204ENST00000427778 SLAIN2Q9P270 581 aa13.05□□□□□ -0.32
LINC00963-204ENST00000427778 METP08581 1390 aa13.04□□□□□ -0.32
LINC00963-204ENST00000427778 MYOM2P54296 1465 aa13.04□□□□□ -0.32
LINC00963-204ENST00000427778 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
LINC00963-204ENST00000427778 LAMC1P11047 1609 aa13.03□□□□□ -0.32
LINC00963-204ENST00000427778 PTCH1Q13635 1447 aa13.03□□□□□ -0.32
LINC00963-204ENST00000427778 PIK3C2GO75747 1445 aa13.02□□□□□ -0.33
LINC00963-204ENST00000427778 DCCP43146 1447 aa13.02□□□□□ -0.33
LINC00963-204ENST00000427778 AMOTL2Q9Y2J4 779 aa13.01□□□□□ -0.33
LINC00963-204ENST00000427778 KNDC1Q76NI1 1749 aa13.01□□□□□ -0.33
LINC00963-204ENST00000427778 NALCNQ8IZF0 1738 aa13.01□□□□□ -0.33
LINC00963-204ENST00000427778 ASXL1Q8IXJ9 1541 aa12.99□□□□□ -0.33
LINC00963-204ENST00000427778 EVX2Q03828 476 aa12.99□□□□□ -0.33
LINC00963-204ENST00000427778 TECPR2O15040 1411 aa12.98□□□□□ -0.33
LINC00963-204ENST00000427778 ADGRL3Q9HAR2 1447 aa12.98□□□□□ -0.33
LINC00963-204ENST00000427778 AFF2P51816 1311 aa12.98□□□□□ -0.33
LINC00963-204ENST00000427778 ADGRF5Q8IZF2 1346 aa12.98□□□□□ -0.33
LINC00963-204ENST00000427778 EP400Q96L91 3159 aa12.97□□□□□ -0.33
LINC00963-204ENST00000427778 C19orf44Q9H6X5 657 aa12.97□□□□□ -0.33
LINC00963-204ENST00000427778 RGL3Q3MIN7 710 aa12.96□□□□□ -0.33
LINC00963-204ENST00000427778 ATAD2Q6PL18 1390 aa12.95□□□□□ -0.34
LINC00963-204ENST00000427778 NUTM2BA6NNL0 878 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-204ENST00000427778 NUTM2EB1AL46 878 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-204ENST00000427778 CADPS2Q86UW7 1296 aa12.95□□□□□ -0.34
LINC00963-204ENST00000427778 NUTM2AQ8IVF1 878 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-204ENST00000427778 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
LINC00963-204ENST00000427778 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
LINC00963-204ENST00000427778 C14orf37Q86TY3 774 aa12.94□□□□□ -0.34
LINC00963-204ENST00000427778 LRP5O75197 1615 aa12.94□□□□□ -0.34
LINC00963-204ENST00000427778 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
LINC00963-204ENST00000427778 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
LINC00963-204ENST00000427778 MARF1Q9Y4F3 1742 aaKnown RBP12.93□□□□□ -0.34
LINC00963-204ENST00000427778 ABCC11Q96J66 1382 aa12.93□□□□□ -0.34
LINC00963-204ENST00000427778 ADGRB1O14514 1584 aa12.92□□□□□ -0.34
LINC00963-204ENST00000427778 RBM6P78332 1123 aaKnown RBP12.92□□□□□ -0.34
LINC00963-204ENST00000427778 MST1RQ04912 1400 aa12.92□□□□□ -0.34
LINC00963-204ENST00000427778 C14orf93Q9H972 538 aaKnown RBP12.92□□□□□ -0.34
LINC00963-204ENST00000427778 KIAA1210Q9ULL0 1709 aa12.92□□□□□ -0.34
LINC00963-204ENST00000427778 YTHDC2Q9H6S0 1430 aaKnown RBP12.91□□□□□ -0.34
LINC00963-204ENST00000427778 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
LINC00963-204ENST00000427778 ATF3P18847 181 aa12.91□□□□□ -0.34
LINC00963-204ENST00000427778 ZRANB1Q9UGI0 708 aa12.91□□□□□ -0.34
LINC00963-204ENST00000427778 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
LINC00963-204ENST00000427778 DLC1Q96QB1 1528 aa12.9□□□□□ -0.34
LINC00963-204ENST00000427778 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
LINC00963-204ENST00000427778 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
LINC00963-204ENST00000427778 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
LINC00963-204ENST00000427778 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
LINC00963-204ENST00000427778 BRINP3Q76B58 766 aa12.89□□□□□ -0.35
LINC00963-204ENST00000427778 C8orf37Q96NL8 207 aa12.89□□□□□ -0.35
LINC00963-204ENST00000427778 TRIM26Q12899 539 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-204ENST00000427778 SIRT1Q96EB6 747 aa12.88□□□□□ -0.35
LINC00963-204ENST00000427778 QTRT2Q9H974 415 aaKnown RBP12.88□□□□□ -0.35
LINC00963-204ENST00000427778 FMN2Q9NZ56 1722 aa12.87□□□□□ -0.35
LINC00963-204ENST00000427778 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
LINC00963-204ENST00000427778 C1orf167Q5SNV9 1468 aa12.86□□□□□ -0.35
LINC00963-204ENST00000427778 PNPLA6Q8IY17 1366 aa12.86□□□□□ -0.35
LINC00963-204ENST00000427778 CFAP70Q5T0N1 1121 aa12.86□□□□□ -0.35
LINC00963-204ENST00000427778 NGLY1Q96IV0 654 aa12.86□□□□□ -0.35
LINC00963-204ENST00000427778 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.85□□□□□ -0.35
LINC00963-204ENST00000427778 COL22A1Q8NFW1 1626 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-204ENST00000427778 TMEM132EQ6IEE7 984 aa12.85□□□□□ -0.35
LINC00963-204ENST00000427778 DCAF11Q8TEB1 546 aa12.85□□□□□ -0.35
LINC00963-204ENST00000427778 BRWD3Q6RI45 1802 aa12.85□□□□□ -0.35
LINC00963-204ENST00000427778 ARHGEF28Q8N1W1 1705 aaKnown RBP12.85□□□□□ -0.35
LINC00963-204ENST00000427778 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-204ENST00000427778 PLEKHH1Q9ULM0 1364 aa12.82□□□□□ -0.36
LINC00963-204ENST00000427778 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
LINC00963-204ENST00000427778 STK26Q9P289 416 aa12.82□□□□□ -0.36
LINC00963-204ENST00000427778 KIF1AQ12756 1690 aa12.81□□□□□ -0.36
LINC00963-204ENST00000427778 ATRNO75882 1429 aa12.8□□□□□ -0.36
LINC00963-204ENST00000427778 RGPD8O14715 1765 aaPredicted RBP12.8□□□□□ -0.36
LINC00963-204ENST00000427778 WAPLQ7Z5K2 1190 aa12.8□□□□□ -0.36
LINC00963-204ENST00000427778 KDM2AQ9Y2K7 1162 aa12.8□□□□□ -0.36
LINC00963-204ENST00000427778 TRPM1Q7Z4N2 1603 aa12.79□□□□□ -0.36
LINC00963-204ENST00000427778 USP32Q8NFA0 1604 aa12.78□□□□□ -0.36
LINC00963-204ENST00000427778 ADAMTS2O95450 1211 aa12.78□□□□□ -0.36
LINC00963-204ENST00000427778 USP21Q9UK80 565 aa12.78□□□□□ -0.36
LINC00963-204ENST00000427778 TRPC5Q9UL62 973 aaPredicted RBP12.78□□□□□ -0.36
LINC00963-204ENST00000427778 CCDC125Q86Z20 511 aa12.77□□□□□ -0.37
LINC00963-204ENST00000427778 PRAM1Q96QH2 718 aa12.77□□□□□ -0.37
LINC00963-204ENST00000427778 ANKARQ7Z5J8 1434 aa12.77□□□□□ -0.37
LINC00963-204ENST00000427778 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
LINC00963-204ENST00000427778 DDX17Q92841 729 aaKnown RBP12.76□□□□□ -0.37
LINC00963-204ENST00000427778 SOS2Q07890 1332 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms