RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 C1orf167Q5SNV9 1468 aa21.58■■□□□ 1.05
RTN4-210ENST00000427710 NUTM2FA1L443 756 aa21.58■■□□□ 1.05
RTN4-210ENST00000427710 RGPD8O14715 1765 aaPredicted RBP21.57■■□□□ 1.04
RTN4-210ENST00000427710 TRAK1Q9UPV9 953 aa21.57■■□□□ 1.04
RTN4-210ENST00000427710 NHSL1Q5SYE7 1610 aa21.57■■□□□ 1.04
RTN4-210ENST00000427710 PRAM1Q96QH2 718 aa21.56■■□□□ 1.04
RTN4-210ENST00000427710 ORAI2Q96SN7 254 aa21.56■■□□□ 1.04
RTN4-210ENST00000427710 CDC42BPGQ6DT37 1551 aa21.56■■□□□ 1.04
RTN4-210ENST00000427710 ILDR2Q71H61 639 aa21.54■■□□□ 1.04
RTN4-210ENST00000427710 L3MBTL2Q969R5 705 aa21.54■■□□□ 1.04
RTN4-210ENST00000427710 STAC3Q96MF2 364 aa21.54■■□□□ 1.04
RTN4-210ENST00000427710 FMN2Q9NZ56 1722 aa21.54■■□□□ 1.04
RTN4-210ENST00000427710 DLC1Q96QB1 1528 aa21.52■■□□□ 1.04
RTN4-210ENST00000427710 SIRT1Q96EB6 747 aa21.52■■□□□ 1.04
RTN4-210ENST00000427710 POGKQ9P215 609 aa21.52■■□□□ 1.04
RTN4-210ENST00000427710 ARHGEF28Q8N1W1 1705 aaKnown RBP21.52■■□□□ 1.03
RTN4-210ENST00000427710 KIAA1210Q9ULL0 1709 aa21.52■■□□□ 1.03
RTN4-210ENST00000427710 JCADQ9P266 1359 aa21.5■■□□□ 1.03
RTN4-210ENST00000427710 NBPF1Q3BBV0 1214 aa21.5■■□□□ 1.03
RTN4-210ENST00000427710 ESCO1Q5FWF5 840 aa21.49■■□□□ 1.03
RTN4-210ENST00000427710 PHF23Q9BUL5 403 aaPredicted RBP21.49■■□□□ 1.03
RTN4-210ENST00000427710 SHPRHQ149N8 1683 aa21.49■■□□□ 1.03
RTN4-210ENST00000427710 HIRIP3Q9BW71 556 aaPredicted RBP21.47■■□□□ 1.03
RTN4-210ENST00000427710 MINK1Q8N4C8 1332 aaPredicted RBP21.47■■□□□ 1.03
RTN4-210ENST00000427710 PCGF6Q9BYE7 350 aa21.44■■□□□ 1.02
RTN4-210ENST00000427710 XPCQ01831 940 aaPredicted RBP21.43■■□□□ 1.02
RTN4-210ENST00000427710 LRP6O75581 1613 aa21.43■■□□□ 1.02
RTN4-210ENST00000427710 NUTM2BA6NNL0 878 aaPredicted RBP21.42■■□□□ 1.02
RTN4-210ENST00000427710 NUTM2EB1AL46 878 aaPredicted RBP21.42■■□□□ 1.02
RTN4-210ENST00000427710 TRPM1Q7Z4N2 1603 aa21.42■■□□□ 1.02
RTN4-210ENST00000427710 NUTM2AQ8IVF1 878 aaPredicted RBP21.42■■□□□ 1.02
RTN4-210ENST00000427710 USP32Q8NFA0 1604 aa21.42■■□□□ 1.02
RTN4-210ENST00000427710 ADGRB2O60241 1585 aa21.41■■□□□ 1.02
RTN4-210ENST00000427710 FOXO3O43524 673 aa21.41■■□□□ 1.02
RTN4-210ENST00000427710 RGS17Q9UGC6 210 aaPredicted RBP21.41■■□□□ 1.02
RTN4-210ENST00000427710 LRRC59Q96AG4 307 aaKnown RBP21.4■■□□□ 1.02
RTN4-210ENST00000427710 SOS2Q07890 1332 aaPredicted RBP21.39■■□□□ 1.01
RTN4-210ENST00000427710 PNPLA6Q8IY17 1366 aa21.38■■□□□ 1.01
RTN4-210ENST00000427710 KIF1AQ12756 1690 aa21.38■■□□□ 1.01
RTN4-210ENST00000427710 NBPF8Q3BBV2 869 aa21.38■■□□□ 1.01
RTN4-210ENST00000427710 SPATA31A6Q5VVP1 1343 aa21.37■■□□□ 1.01
RTN4-210ENST00000427710 PXDNQ92626 1479 aa21.37■■□□□ 1.01
RTN4-210ENST00000427710 NPHP3Q7Z494 1330 aa21.36■■□□□ 1.01
RTN4-210ENST00000427710 MEX3CQ5U5Q3 659 aaKnown RBP21.36■■□□□ 1.01
RTN4-210ENST00000427710 PHF8Q9UPP1 1060 aa21.36■■□□□ 1.01
RTN4-210ENST00000427710 PRR36Q9H6K5 1346 aa21.35■■□□□ 1.01
RTN4-210ENST00000427710 WASLO00401 505 aaPredicted RBP21.35■■□□□ 1.01
RTN4-210ENST00000427710 PMFBP1Q8TBY8 1022 aa21.35■■□□□ 1.01
RTN4-210ENST00000427710 TONSLQ96HA7 1378 aa21.35■■□□□ 1.01
RTN4-210ENST00000427710 QRICH2Q9H0J4 1663 aa21.34■■□□□ 1.01
RTN4-210ENST00000427710 TULP4Q9NRJ4 1543 aa21.32■■□□□ 1
RTN4-210ENST00000427710 ANKARQ7Z5J8 1434 aa21.31■■□□□ 1
RTN4-210ENST00000427710 POTEAQ6S8J7 498 aa21.31■■□□□ 1
RTN4-210ENST00000427710 KRT28Q7Z3Y7 464 aa21.31■■□□□ 1
RTN4-210ENST00000427710 ROCK2O75116 1388 aaKnown RBP21.31■■□□□ 1
RTN4-210ENST00000427710 CDK19Q9BWU1 502 aa21.3■■□□□ 1
RTN4-210ENST00000427710 CENPJQ9HC77 1338 aaPredicted RBP21.29■■□□□ 1
RTN4-210ENST00000427710 ADAMTS2O95450 1211 aa21.28■■□□□ 1
RTN4-210ENST00000427710 ITSN1Q15811 1721 aa21.28■■□□□ 1
RTN4-210ENST00000427710 COL22A1Q8NFW1 1626 aaPredicted RBP21.28■■□□□ 1
RTN4-210ENST00000427710 PLEKHG5O94827 1062 aa21.27■■□□□ 1
RTN4-210ENST00000427710 NUDT16Q96DE0 195 aaKnown RBP21.27■■□□□ 1
RTN4-210ENST00000427710 ATP7BP35670 1465 aa21.26■□□□□ 0.99
RTN4-210ENST00000427710 EIF3AQ14152 1382 aaKnown RBP21.26■□□□□ 0.99
RTN4-210ENST00000427710 PSME1Q06323 249 aa21.26■□□□□ 0.99
RTN4-210ENST00000427710 C8orf37Q96NL8 207 aa21.25■□□□□ 0.99
RTN4-210ENST00000427710 SPATA31A3Q5VYP0 1347 aa21.25■□□□□ 0.99
RTN4-210ENST00000427710 TOPAZ1Q8N9V7 1692 aa21.24■□□□□ 0.99
RTN4-210ENST00000427710 TRPM3Q9HCF6 1732 aaPredicted RBP21.24■□□□□ 0.99
RTN4-210ENST00000427710 MARF1Q9Y4F3 1742 aaKnown RBP21.24■□□□□ 0.99
RTN4-210ENST00000427710 LMOD2Q6P5Q4 547 aa21.23■□□□□ 0.99
RTN4-210ENST00000427710 AFF2P51816 1311 aa21.23■□□□□ 0.99
RTN4-210ENST00000427710 NGDNQ8NEJ9 315 aaKnown RBP21.22■□□□□ 0.99
RTN4-210ENST00000427710 CABP2Q9NPB3 220 aa21.22■□□□□ 0.99
RTN4-210ENST00000427710 TNS3Q68CZ2 1445 aa21.21■□□□□ 0.99
RTN4-210ENST00000427710 RALGAPBQ86X10 1494 aa21.21■□□□□ 0.99
RTN4-210ENST00000427710 CARD11Q9BXL7 1154 aa21.21■□□□□ 0.99
RTN4-210ENST00000427710 GPRASP1Q5JY77 1395 aa21.21■□□□□ 0.99
RTN4-210ENST00000427710 SOCS7O14512 581 aa21.2■□□□□ 0.98
RTN4-210ENST00000427710 SRPK2P78362 688 aaKnown RBP21.2■□□□□ 0.98
RTN4-210ENST00000427710 CABLES1Q8TDN4 633 aa21.19■□□□□ 0.98
RTN4-210ENST00000427710 ABCA3Q99758 1704 aa21.18■□□□□ 0.98
RTN4-210ENST00000427710 NGLY1Q96IV0 654 aa21.18■□□□□ 0.98
RTN4-210ENST00000427710 SBNO1A3KN83 1393 aa21.18■□□□□ 0.98
RTN4-210ENST00000427710 ALS2Q96Q42 1657 aa21.18■□□□□ 0.98
RTN4-210ENST00000427710 ZNF772Q68DY9 489 aaPredicted RBP21.17■□□□□ 0.98
RTN4-210ENST00000427710 PAK3O75914 559 aaPredicted RBP21.16■□□□□ 0.98
RTN4-210ENST00000427710 CCDC61Q9Y6R9 512 aa21.16■□□□□ 0.98
RTN4-210ENST00000427710 ACEP12821 1306 aa21.15■□□□□ 0.98
RTN4-210ENST00000427710 PPIP5K1Q6PFW1 1433 aa21.13■□□□□ 0.97
RTN4-210ENST00000427710 CCER1Q8TC90 406 aaPredicted RBP21.13■□□□□ 0.97
RTN4-210ENST00000427710 EVC2Q86UK5 1308 aa21.12■□□□□ 0.97
RTN4-210ENST00000427710 HAP1P54257 671 aaPredicted RBP21.12■□□□□ 0.97
RTN4-210ENST00000427710 ARHGEF10O15013 1369 aa21.11■□□□□ 0.97
RTN4-210ENST00000427710 PLEKHG3A1L390 1219 aa21.11■□□□□ 0.97
RTN4-210ENST00000427710 POLR3AO14802 1390 aaPredicted RBP21.1■□□□□ 0.97
RTN4-210ENST00000427710 NUTM2GQ5VZR2 741 aa21.1■□□□□ 0.97
RTN4-210ENST00000427710 QTRT2Q9H974 415 aaKnown RBP21.1■□□□□ 0.97
RTN4-210ENST00000427710 CABP1Q9NZU7 370 aa21.1■□□□□ 0.97
RTN4-210ENST00000427710 USP21Q9UK80 565 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms