RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 SLAIN2Q9P270 581 aa32.41■■■□□ 2.78
SDHAP1-204ENST00000427415 TRAK1Q9UPV9 953 aa32.41■■■□□ 2.78
SDHAP1-204ENST00000427415 PLEKHH1Q9ULM0 1364 aa32.41■■■□□ 2.78
SDHAP1-204ENST00000427415 PRAM1Q96QH2 718 aa32.38■■■□□ 2.77
SDHAP1-204ENST00000427415 NBPF1Q3BBV0 1214 aa32.37■■■□□ 2.77
SDHAP1-204ENST00000427415 POGKQ9P215 609 aa32.37■■■□□ 2.77
SDHAP1-204ENST00000427415 MST1RQ04912 1400 aa32.35■■■□□ 2.77
SDHAP1-204ENST00000427415 ROCK2O75116 1388 aaKnown RBP32.33■■■□□ 2.77
SDHAP1-204ENST00000427415 TIMELESSQ9UNS1 1208 aa32.33■■■□□ 2.77
SDHAP1-204ENST00000427415 NBPF8Q3BBV2 869 aa32.32■■■□□ 2.76
SDHAP1-204ENST00000427415 RALGAPBQ86X10 1494 aa32.31■■■□□ 2.76
SDHAP1-204ENST00000427415 SAFB2Q14151 953 aaKnown RBP eCLIP32.31■■■□□ 2.76
SDHAP1-204ENST00000427415 ADGRB2O60241 1585 aa32.31■■■□□ 2.76
SDHAP1-204ENST00000427415 FMN2Q9NZ56 1722 aa32.3■■■□□ 2.76
SDHAP1-204ENST00000427415 C1orf167Q5SNV9 1468 aa32.27■■■□□ 2.76
SDHAP1-204ENST00000427415 GPRASP1Q5JY77 1395 aa32.26■■■□□ 2.75
SDHAP1-204ENST00000427415 HSPA1LP34931 641 aa32.25■■■□□ 2.75
SDHAP1-204ENST00000427415 PHLPP1O60346 1717 aa32.23■■■□□ 2.75
SDHAP1-204ENST00000427415 BRINP3Q76B58 766 aa32.22■■■□□ 2.75
SDHAP1-204ENST00000427415 QRICH2Q9H0J4 1663 aa32.21■■■□□ 2.75
SDHAP1-204ENST00000427415 EIF3AQ14152 1382 aaKnown RBP32.21■■■□□ 2.75
SDHAP1-204ENST00000427415 MINK1Q8N4C8 1332 aaPredicted RBP32.21■■■□□ 2.75
SDHAP1-204ENST00000427415 AHDC1Q5TGY3 1603 aaPredicted RBP32.2■■■□□ 2.75
SDHAP1-204ENST00000427415 CARD11Q9BXL7 1154 aa32.18■■■□□ 2.74
SDHAP1-204ENST00000427415 CENPJQ9HC77 1338 aaPredicted RBP32.18■■■□□ 2.74
SDHAP1-204ENST00000427415 NHSL1Q5SYE7 1610 aa32.18■■■□□ 2.74
SDHAP1-204ENST00000427415 RGPD8O14715 1765 aaPredicted RBP32.17■■■□□ 2.74
SDHAP1-204ENST00000427415 HIRIP3Q9BW71 556 aaPredicted RBP32.16■■■□□ 2.74
SDHAP1-204ENST00000427415 ANKARQ7Z5J8 1434 aa32.14■■■□□ 2.74
SDHAP1-204ENST00000427415 NUTM2FA1L443 756 aa32.13■■■□□ 2.73
SDHAP1-204ENST00000427415 KIF1AQ12756 1690 aa32.13■■■□□ 2.73
SDHAP1-204ENST00000427415 COL16A1Q07092 1604 aaPredicted RBP32.12■■■□□ 2.73
SDHAP1-204ENST00000427415 TULP4Q9NRJ4 1543 aa32.12■■■□□ 2.73
SDHAP1-204ENST00000427415 WASLO00401 505 aaPredicted RBP32.11■■■□□ 2.73
SDHAP1-204ENST00000427415 ORAI2Q96SN7 254 aa32.11■■■□□ 2.73
SDHAP1-204ENST00000427415 ESCO1Q5FWF5 840 aa32.1■■■□□ 2.73
SDHAP1-204ENST00000427415 USP32Q8NFA0 1604 aa32.1■■■□□ 2.73
SDHAP1-204ENST00000427415 ITSN1Q15811 1721 aa32.09■■■□□ 2.73
SDHAP1-204ENST00000427415 NPHP3Q7Z494 1330 aa32.01■■■□□ 2.72
SDHAP1-204ENST00000427415 CDK19Q9BWU1 502 aa32.01■■■□□ 2.71
SDHAP1-204ENST00000427415 ATP7BP35670 1465 aa32.01■■■□□ 2.71
SDHAP1-204ENST00000427415 SBNO2Q9Y2G9 1366 aa32■■■□□ 2.71
SDHAP1-204ENST00000427415 DDX17Q92841 729 aaKnown RBP31.99■■■□□ 2.71
SDHAP1-204ENST00000427415 PHF8Q9UPP1 1060 aa31.99■■■□□ 2.71
SDHAP1-204ENST00000427415 TOPAZ1Q8N9V7 1692 aa31.99■■■□□ 2.71
SDHAP1-204ENST00000427415 JCADQ9P266 1359 aa31.98■■■□□ 2.71
SDHAP1-204ENST00000427415 SHPRHQ149N8 1683 aa31.98■■■□□ 2.71
SDHAP1-204ENST00000427415 PRR36Q9H6K5 1346 aa31.98■■■□□ 2.71
SDHAP1-204ENST00000427415 EVC2Q86UK5 1308 aa31.97■■■□□ 2.71
SDHAP1-204ENST00000427415 SRPK2P78362 688 aaKnown RBP31.95■■■□□ 2.71
SDHAP1-204ENST00000427415 SOS2Q07890 1332 aaPredicted RBP31.95■■■□□ 2.7
SDHAP1-204ENST00000427415 FOXO3O43524 673 aa31.94■■■□□ 2.7
SDHAP1-204ENST00000427415 NUDT16Q96DE0 195 aaKnown RBP31.94■■■□□ 2.7
SDHAP1-204ENST00000427415 PXDNQ92626 1479 aa31.94■■■□□ 2.7
SDHAP1-204ENST00000427415 USP47Q96K76 1375 aa31.94■■■□□ 2.7
SDHAP1-204ENST00000427415 LRRC59Q96AG4 307 aaKnown RBP31.93■■■□□ 2.7
SDHAP1-204ENST00000427415 PMFBP1Q8TBY8 1022 aa31.89■■■□□ 2.7
SDHAP1-204ENST00000427415 CCDC61Q9Y6R9 512 aa31.89■■■□□ 2.7
SDHAP1-204ENST00000427415 CABP2Q9NPB3 220 aa31.88■■■□□ 2.69
SDHAP1-204ENST00000427415 MED1Q15648 1581 aaPredicted RBP31.88■■■□□ 2.69
SDHAP1-204ENST00000427415 ST20-MTHFSA0A0A6YYL1 179 aa31.87■■■□□ 2.69
SDHAP1-204ENST00000427415 XPCQ01831 940 aaPredicted RBP31.86■■■□□ 2.69
SDHAP1-204ENST00000427415 SLC24A1O60721 1099 aa31.85■■■□□ 2.69
SDHAP1-204ENST00000427415 SPATA31A6Q5VVP1 1343 aa31.84■■■□□ 2.69
SDHAP1-204ENST00000427415 PSME1Q06323 249 aa31.84■■■□□ 2.69
SDHAP1-204ENST00000427415 KRT28Q7Z3Y7 464 aa31.84■■■□□ 2.69
SDHAP1-204ENST00000427415 NGDNQ8NEJ9 315 aaKnown RBP31.84■■■□□ 2.69
SDHAP1-204ENST00000427415 PPIP5K1Q6PFW1 1433 aa31.83■■■□□ 2.69
SDHAP1-204ENST00000427415 PNPLA6Q8IY17 1366 aa31.83■■■□□ 2.69
SDHAP1-204ENST00000427415 ATAD2Q6PL18 1390 aa31.82■■■□□ 2.69
SDHAP1-204ENST00000427415 TRPM3Q9HCF6 1732 aaPredicted RBP31.8■■■□□ 2.68
SDHAP1-204ENST00000427415 COL22A1Q8NFW1 1626 aaPredicted RBP31.8■■■□□ 2.68
SDHAP1-204ENST00000427415 TESK2Q96S53 571 aa31.8■■■□□ 2.68
SDHAP1-204ENST00000427415 SBNO1A3KN83 1393 aa31.8■■■□□ 2.68
SDHAP1-204ENST00000427415 PLEKHG3A1L390 1219 aa31.79■■■□□ 2.68
SDHAP1-204ENST00000427415 POLR3AO14802 1390 aaPredicted RBP31.79■■■□□ 2.68
SDHAP1-204ENST00000427415 TNS3Q68CZ2 1445 aa31.78■■■□□ 2.68
SDHAP1-204ENST00000427415 SPATA31A3Q5VYP0 1347 aa31.76■■■□□ 2.68
SDHAP1-204ENST00000427415 ACEP12821 1306 aa31.75■■■□□ 2.67
SDHAP1-204ENST00000427415 PUS7Q96PZ0 661 aaKnown RBP31.73■■■□□ 2.67
SDHAP1-204ENST00000427415 ALS2Q96Q42 1657 aa31.73■■■□□ 2.67
SDHAP1-204ENST00000427415 ARHGEF10O15013 1369 aa31.72■■■□□ 2.67
SDHAP1-204ENST00000427415 EIF4G2P78344 907 aaKnown RBP eCLIP31.72■■■□□ 2.67
SDHAP1-204ENST00000427415 TMF1P82094 1093 aa31.72■■■□□ 2.67
SDHAP1-204ENST00000427415 CABP1Q9NZU7 370 aa31.72■■■□□ 2.67
SDHAP1-204ENST00000427415 LRP6O75581 1613 aa31.71■■■□□ 2.67
SDHAP1-204ENST00000427415 AKAP12Q02952 1782 aa31.71■■■□□ 2.67
SDHAP1-204ENST00000427415 NUTM2BA6NNL0 878 aaPredicted RBP31.69■■■□□ 2.66
SDHAP1-204ENST00000427415 NUTM2EB1AL46 878 aaPredicted RBP31.69■■■□□ 2.66
SDHAP1-204ENST00000427415 NUTM2AQ8IVF1 878 aaPredicted RBP31.69■■■□□ 2.66
SDHAP1-204ENST00000427415 DISP3Q9P2K9 1392 aa31.68■■■□□ 2.66
SDHAP1-204ENST00000427415 LMOD2Q6P5Q4 547 aa31.67■■■□□ 2.66
SDHAP1-204ENST00000427415 BRD4O60885 1362 aaPredicted RBP31.67■■■□□ 2.66
SDHAP1-204ENST00000427415 PAK3O75914 559 aaPredicted RBP31.66■■■□□ 2.66
SDHAP1-204ENST00000427415 MEX3CQ5U5Q3 659 aaKnown RBP31.66■■■□□ 2.66
SDHAP1-204ENST00000427415 PHF23Q9BUL5 403 aaPredicted RBP31.66■■■□□ 2.66
SDHAP1-204ENST00000427415 CDCA8Q53HL2 280 aa31.65■■■□□ 2.66
SDHAP1-204ENST00000427415 USP6P35125 1406 aa31.65■■■□□ 2.66
SDHAP1-204ENST00000427415 HSPA5P11021 654 aaKnown RBP31.64■■■□□ 2.66
SDHAP1-204ENST00000427415 NINLQ9Y2I6 1382 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms