RNA–Protein interactions for RNA: ENST00000425424.3

SAPCD1-209, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SAPCD1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-209ENST00000425424 IQSEC2Q5JU85 1478 aa23.2■■□□□ 1.3
SAPCD1-209ENST00000425424 POGKQ9P215 609 aa23.2■■□□□ 1.3
SAPCD1-209ENST00000425424 DCCP43146 1447 aa23.19■■□□□ 1.3
SAPCD1-209ENST00000425424 TMEM94Q12767 1356 aa23.19■■□□□ 1.3
SAPCD1-209ENST00000425424 PROSER2Q86WR7 435 aaPredicted RBP23.19■■□□□ 1.3
SAPCD1-209ENST00000425424 ST20-MTHFSA0A0A6YYL1 179 aa23.17■■□□□ 1.3
SAPCD1-209ENST00000425424 WAPLQ7Z5K2 1190 aa23.17■■□□□ 1.3
SAPCD1-209ENST00000425424 HSPA5P11021 654 aaKnown RBP23.16■■□□□ 1.3
SAPCD1-209ENST00000425424 TESK2Q96S53 571 aa23.15■■□□□ 1.3
SAPCD1-209ENST00000425424 TULP4Q9NRJ4 1543 aa23.13■■□□□ 1.29
SAPCD1-209ENST00000425424 C19orf44Q9H6X5 657 aa23.11■■□□□ 1.29
SAPCD1-209ENST00000425424 MSH6P52701 1360 aa23.11■■□□□ 1.29
SAPCD1-209ENST00000425424 FMN2Q9NZ56 1722 aa23.11■■□□□ 1.29
SAPCD1-209ENST00000425424 SAFB2Q14151 953 aaKnown RBP eCLIP23.09■■□□□ 1.29
SAPCD1-209ENST00000425424 MINK1Q8N4C8 1332 aaPredicted RBP23.08■■□□□ 1.29
SAPCD1-209ENST00000425424 PUS7Q96PZ0 661 aaKnown RBP23.08■■□□□ 1.29
SAPCD1-209ENST00000425424 EVC2Q86UK5 1308 aa23.08■■□□□ 1.28
SAPCD1-209ENST00000425424 ANKARQ7Z5J8 1434 aa23.07■■□□□ 1.28
SAPCD1-209ENST00000425424 WASLO00401 505 aaPredicted RBP23.06■■□□□ 1.28
SAPCD1-209ENST00000425424 TMF1P82094 1093 aa23.06■■□□□ 1.28
SAPCD1-209ENST00000425424 C14orf37Q86TY3 774 aa23.05■■□□□ 1.28
SAPCD1-209ENST00000425424 RBM33Q96EV2 1170 aaKnown RBP23.04■■□□□ 1.28
SAPCD1-209ENST00000425424 DISP3Q9P2K9 1392 aa23.03■■□□□ 1.28
SAPCD1-209ENST00000425424 CDCA8Q53HL2 280 aa23.03■■□□□ 1.28
SAPCD1-209ENST00000425424 CADPS2Q86UW7 1296 aa23.03■■□□□ 1.28
SAPCD1-209ENST00000425424 ATP7BP35670 1465 aa23.03■■□□□ 1.28
SAPCD1-209ENST00000425424 TOPAZ1Q8N9V7 1692 aa23.03■■□□□ 1.28
SAPCD1-209ENST00000425424 USP32Q8NFA0 1604 aa23.02■■□□□ 1.28
SAPCD1-209ENST00000425424 HIRIP3Q9BW71 556 aaPredicted RBP23.02■■□□□ 1.28
SAPCD1-209ENST00000425424 ITSN1Q15811 1721 aa23.02■■□□□ 1.28
SAPCD1-209ENST00000425424 MST1RQ04912 1400 aa23.01■■□□□ 1.27
SAPCD1-209ENST00000425424 ATAD2Q6PL18 1390 aa23.01■■□□□ 1.27
SAPCD1-209ENST00000425424 ATF3P18847 181 aa23■■□□□ 1.27
SAPCD1-209ENST00000425424 CERKQ8TCT0 537 aa22.99■■□□□ 1.27
SAPCD1-209ENST00000425424 CDK19Q9BWU1 502 aa22.99■■□□□ 1.27
SAPCD1-209ENST00000425424 NINLQ9Y2I6 1382 aa22.98■■□□□ 1.27
SAPCD1-209ENST00000425424 C1orf167Q5SNV9 1468 aa22.97■■□□□ 1.27
SAPCD1-209ENST00000425424 SRPK2P78362 688 aaKnown RBP22.96■■□□□ 1.27
SAPCD1-209ENST00000425424 KIF1AQ12756 1690 aa22.95■■□□□ 1.26
SAPCD1-209ENST00000425424 MYOM1P52179 1685 aa22.94■■□□□ 1.26
SAPCD1-209ENST00000425424 PRR36Q9H6K5 1346 aa22.94■■□□□ 1.26
SAPCD1-209ENST00000425424 CCDC7Q96M83 1385 aa22.93■■□□□ 1.26
SAPCD1-209ENST00000425424 CABP2Q9NPB3 220 aa22.93■■□□□ 1.26
SAPCD1-209ENST00000425424 KIF7Q2M1P5 1343 aa22.92■■□□□ 1.26
SAPCD1-209ENST00000425424 NUDT16Q96DE0 195 aaKnown RBP22.92■■□□□ 1.26
SAPCD1-209ENST00000425424 CCDC61Q9Y6R9 512 aa22.92■■□□□ 1.26
SAPCD1-209ENST00000425424 C11orf95C9JLR9 678 aaPredicted RBP22.91■■□□□ 1.26
SAPCD1-209ENST00000425424 RGPD8O14715 1765 aaPredicted RBP22.91■■□□□ 1.26
SAPCD1-209ENST00000425424 WASHC2AQ641Q2 1341 aa22.9■■□□□ 1.26
SAPCD1-209ENST00000425424 PPIP5K1Q6PFW1 1433 aa22.9■■□□□ 1.26
SAPCD1-209ENST00000425424 TOM1O60784 492 aa22.89■■□□□ 1.25
SAPCD1-209ENST00000425424 SLAIN2Q9P270 581 aa22.89■■□□□ 1.25
SAPCD1-209ENST00000425424 PLEKHG3A1L390 1219 aa22.87■■□□□ 1.25
SAPCD1-209ENST00000425424 ZNF316A6NFI3 1004 aaPredicted RBP22.87■■□□□ 1.25
SAPCD1-209ENST00000425424 POLR3AO14802 1390 aaPredicted RBP22.87■■□□□ 1.25
SAPCD1-209ENST00000425424 ROBO1Q9Y6N7 1651 aa22.84■■□□□ 1.25
SAPCD1-209ENST00000425424 AKAP12Q02952 1782 aa22.84■■□□□ 1.25
SAPCD1-209ENST00000425424 NHSL1Q5SYE7 1610 aa22.84■■□□□ 1.25
SAPCD1-209ENST00000425424 CPSF1Q10570 1443 aaKnown RBP22.83■■□□□ 1.25
SAPCD1-209ENST00000425424 NUTM2FA1L443 756 aa22.83■■□□□ 1.25
SAPCD1-209ENST00000425424 PHF8Q9UPP1 1060 aa22.83■■□□□ 1.25
SAPCD1-209ENST00000425424 ANKRD36BQ8N2N9 1353 aa22.83■■□□□ 1.25
SAPCD1-209ENST00000425424 CD163L1Q9NR16 1453 aa22.83■■□□□ 1.25
SAPCD1-209ENST00000425424 ESCO1Q5FWF5 840 aa22.82■■□□□ 1.24
SAPCD1-209ENST00000425424 BRINP3Q76B58 766 aa22.82■■□□□ 1.24
SAPCD1-209ENST00000425424 MON2Q7Z3U7 1717 aa22.82■■□□□ 1.24
SAPCD1-209ENST00000425424 AHDC1Q5TGY3 1603 aaPredicted RBP22.82■■□□□ 1.24
SAPCD1-209ENST00000425424 BRD4O60885 1362 aaPredicted RBP22.81■■□□□ 1.24
SAPCD1-209ENST00000425424 CABP1Q9NZU7 370 aa22.81■■□□□ 1.24
SAPCD1-209ENST00000425424 UBAP1LF5GYI3 381 aa22.8■■□□□ 1.24
SAPCD1-209ENST00000425424 ORAI2Q96SN7 254 aa22.8■■□□□ 1.24
SAPCD1-209ENST00000425424 NRKQ7Z2Y5 1582 aa22.8■■□□□ 1.24
SAPCD1-209ENST00000425424 ZNF692Q9BU19 519 aaPredicted RBP22.78■■□□□ 1.24
SAPCD1-209ENST00000425424 TERF2IPQ9NYB0 399 aa22.78■■□□□ 1.24
SAPCD1-209ENST00000425424 A0A1W2PP64 1363 aa22.77■■□□□ 1.24
SAPCD1-209ENST00000425424 TMC1Q8TDI8 760 aa22.77■■□□□ 1.24
SAPCD1-209ENST00000425424 SLC12A5Q9H2X9 1139 aa22.77■■□□□ 1.24
SAPCD1-209ENST00000425424 ACEP12821 1306 aa22.77■■□□□ 1.24
SAPCD1-209ENST00000425424 NPHP3Q7Z494 1330 aa22.77■■□□□ 1.24
SAPCD1-209ENST00000425424 USP6P35125 1406 aa22.76■■□□□ 1.23
SAPCD1-209ENST00000425424 PXDNQ92626 1479 aa22.75■■□□□ 1.23
SAPCD1-209ENST00000425424 HDGFL2Q7Z4V5 671 aaPredicted RBP22.75■■□□□ 1.23
SAPCD1-209ENST00000425424 POLR3GLQ9BT43 218 aa22.75■■□□□ 1.23
SAPCD1-209ENST00000425424 EDC4Q6P2E9 1401 aaKnown RBP22.74■■□□□ 1.23
SAPCD1-209ENST00000425424 SSH2Q76I76 1423 aa22.74■■□□□ 1.23
SAPCD1-209ENST00000425424 TRPM3Q9HCF6 1732 aaPredicted RBP22.74■■□□□ 1.23
SAPCD1-209ENST00000425424 NGDNQ8NEJ9 315 aaKnown RBP22.74■■□□□ 1.23
SAPCD1-209ENST00000425424 PMFBP1Q8TBY8 1022 aa22.74■■□□□ 1.23
SAPCD1-209ENST00000425424 KTN1Q86UP2 1357 aaKnown RBP22.73■■□□□ 1.23
SAPCD1-209ENST00000425424 SOS2Q07890 1332 aaPredicted RBP22.71■■□□□ 1.23
SAPCD1-209ENST00000425424 SBNO1A3KN83 1393 aa22.71■■□□□ 1.23
SAPCD1-209ENST00000425424 FOXO3O43524 673 aa22.7■■□□□ 1.22
SAPCD1-209ENST00000425424 COL16A1Q07092 1604 aaPredicted RBP22.69■■□□□ 1.22
SAPCD1-209ENST00000425424 PANK3Q9H999 370 aa22.68■■□□□ 1.22
SAPCD1-209ENST00000425424 PHLPP1O60346 1717 aa22.68■■□□□ 1.22
SAPCD1-209ENST00000425424 USP54Q70EL1 1684 aa22.68■■□□□ 1.22
SAPCD1-209ENST00000425424 ALS2Q96Q42 1657 aa22.68■■□□□ 1.22
SAPCD1-209ENST00000425424 TTC21AQ8NDW8 1320 aa22.67■■□□□ 1.22
SAPCD1-209ENST00000425424 PIP4K2BP78356 416 aa22.67■■□□□ 1.22
SAPCD1-209ENST00000425424 PSME1Q06323 249 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms