RNA–Protein interactions for RNA: ENST00000424953.1

LINC02238-201, Transcript of long intergenic non-protein coding RNA 2238, humanhuman

TSL 5 BASIC

Gene LINC02238, Length 557 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02238-201ENST00000424953 SPSB2Q99619 263 aa9.89□□□□□ -0.83
LINC02238-201ENST00000424953 SALL2Q9Y467 1007 aaPredicted RBP9.89□□□□□ -0.83
LINC02238-201ENST00000424953 SYMPKQ92797 1274 aaKnown RBP9.88□□□□□ -0.83
LINC02238-201ENST00000424953 POLR3EQ9NVU0 708 aa9.88□□□□□ -0.83
LINC02238-201ENST00000424953 LIMD1Q9UGP4 676 aa9.88□□□□□ -0.83
LINC02238-201ENST00000424953 PCDHB15Q9Y5E8 787 aa9.88□□□□□ -0.83
LINC02238-201ENST00000424953 GJA5P36382 358 aa9.87□□□□□ -0.83
LINC02238-201ENST00000424953 CLK2P49760 499 aaKnown RBP9.87□□□□□ -0.83
LINC02238-201ENST00000424953 SH3D19Q5HYK7 790 aa9.87□□□□□ -0.83
LINC02238-201ENST00000424953 CSPP1Q1MSJ5 1256 aa9.86□□□□□ -0.83
LINC02238-201ENST00000424953 C6orf229H3BNL8 230 aa9.85□□□□□ -0.83
LINC02238-201ENST00000424953 SKIV2LQ15477 1246 aaKnown RBP9.85□□□□□ -0.83
LINC02238-201ENST00000424953 FAM160A2Q8N612 972 aaPredicted RBP9.85□□□□□ -0.83
LINC02238-201ENST00000424953 S1PR4O95977 384 aa9.84□□□□□ -0.83
LINC02238-201ENST00000424953 PPP1R18Q6NYC8 613 aa9.84□□□□□ -0.83
LINC02238-201ENST00000424953 USB1Q9BQ65 265 aaKnown RBP9.84□□□□□ -0.83
LINC02238-201ENST00000424953 SLC6A16Q9GZN6 736 aa9.84□□□□□ -0.83
LINC02238-201ENST00000424953 MTMR2Q13614 643 aa9.82□□□□□ -0.84
LINC02238-201ENST00000424953 TUSC1Q2TAM9 212 aa9.82□□□□□ -0.84
LINC02238-201ENST00000424953 MSS51Q4VC12 460 aa9.82□□□□□ -0.84
LINC02238-201ENST00000424953 PROCA1Q8NCQ7 364 aaPredicted RBP9.82□□□□□ -0.84
LINC02238-201ENST00000424953 CABLES1Q8TDN4 633 aa9.82□□□□□ -0.84
LINC02238-201ENST00000424953 PRDM9Q9NQV7 894 aa9.82□□□□□ -0.84
LINC02238-201ENST00000424953 ATP1B4Q9UN42 357 aaPredicted RBP9.82□□□□□ -0.84
LINC02238-201ENST00000424953 HRCP23327 699 aa9.81□□□□□ -0.84
LINC02238-201ENST00000424953 QPCTQ16769 361 aa9.81□□□□□ -0.84
LINC02238-201ENST00000424953 RETREG3Q86VR2 466 aa9.81□□□□□ -0.84
LINC02238-201ENST00000424953 ZBTB3Q9H5J0 574 aa9.81□□□□□ -0.84
LINC02238-201ENST00000424953 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.81□□□□□ -0.84
LINC02238-201ENST00000424953 GGCXP38435 758 aa9.8□□□□□ -0.84
LINC02238-201ENST00000424953 PRPF38BQ5VTL8 546 aaKnown RBP9.8□□□□□ -0.84
LINC02238-201ENST00000424953 GOPCQ9HD26 462 aa9.8□□□□□ -0.84
LINC02238-201ENST00000424953 PPEF1O14829 653 aaPredicted RBP9.79□□□□□ -0.84
LINC02238-201ENST00000424953 LILRB3O75022 631 aa9.79□□□□□ -0.84
LINC02238-201ENST00000424953 SPDYE5A6NIY4 337 aa9.78□□□□□ -0.84
LINC02238-201ENST00000424953 NUTM2BA6NNL0 878 aaPredicted RBP9.78□□□□□ -0.84
LINC02238-201ENST00000424953 NUTM2EB1AL46 878 aaPredicted RBP9.78□□□□□ -0.84
LINC02238-201ENST00000424953 RNF223E7ERA6 249 aa9.78□□□□□ -0.84
LINC02238-201ENST00000424953 NUTM2DQ5VT03 806 aaPredicted RBP9.78□□□□□ -0.84
LINC02238-201ENST00000424953 Q6ZNB5 142 aa9.78□□□□□ -0.84
LINC02238-201ENST00000424953 NUTM2AQ8IVF1 878 aaPredicted RBP9.78□□□□□ -0.84
LINC02238-201ENST00000424953 PRR7Q8TB68 274 aa9.78□□□□□ -0.84
LINC02238-201ENST00000424953 PCMTD1Q96MG8 357 aaPredicted RBP9.78□□□□□ -0.84
LINC02238-201ENST00000424953 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC02238-201ENST00000424953 LAPTM4AQ15012 233 aa9.77□□□□□ -0.85
LINC02238-201ENST00000424953 FBXO31Q5XUX0 539 aaPredicted RBP9.77□□□□□ -0.85
LINC02238-201ENST00000424953 CFAP99D6REC4 459 aa9.76□□□□□ -0.85
LINC02238-201ENST00000424953 MMP16P51512 607 aa9.76□□□□□ -0.85
LINC02238-201ENST00000424953 RTL5Q5HYW3 569 aaPredicted RBP9.76□□□□□ -0.85
LINC02238-201ENST00000424953 DXOO77932 396 aaKnown RBP9.75□□□□□ -0.85
LINC02238-201ENST00000424953 JUNDP17535 347 aa9.75□□□□□ -0.85
LINC02238-201ENST00000424953 ANKLE1Q8NAG6 615 aa9.74□□□□□ -0.85
LINC02238-201ENST00000424953 PRKD2Q9BZL6 878 aa9.74□□□□□ -0.85
LINC02238-201ENST00000424953 FCF1Q9Y324 198 aaKnown RBP9.73□□□□□ -0.85
LINC02238-201ENST00000424953 GFRA3O60609 400 aa9.72□□□□□ -0.85
LINC02238-201ENST00000424953 PPP2R2DQ66LE6 453 aa9.72□□□□□ -0.85
LINC02238-201ENST00000424953 TSC1Q92574 1164 aa9.72□□□□□ -0.85
LINC02238-201ENST00000424953 V9GY48 417 aaPredicted RBP9.72□□□□□ -0.85
LINC02238-201ENST00000424953 DESI1Q6ICB0 168 aa9.71□□□□□ -0.86
LINC02238-201ENST00000424953 PLA2G2CQ5R387 149 aa9.7□□□□□ -0.86
LINC02238-201ENST00000424953 CCDC24Q8N4L8 307 aa9.69□□□□□ -0.86
LINC02238-201ENST00000424953 RFC5P40937 340 aa9.68□□□□□ -0.86
LINC02238-201ENST00000424953 HELBQ8NG08 1087 aaPredicted RBP9.68□□□□□ -0.86
LINC02238-201ENST00000424953 EMID1Q96A84 441 aaPredicted RBP9.68□□□□□ -0.86
LINC02238-201ENST00000424953 NUDT12Q9BQG2 462 aa9.68□□□□□ -0.86
LINC02238-201ENST00000424953 PER1O15534 1290 aaPredicted RBP9.67□□□□□ -0.86
LINC02238-201ENST00000424953 PTPRNQ16849 979 aa9.67□□□□□ -0.86
LINC02238-201ENST00000424953 TMEM132AQ24JP5 1023 aa9.67□□□□□ -0.86
LINC02238-201ENST00000424953 LYPD8Q6UX82 237 aa9.67□□□□□ -0.86
LINC02238-201ENST00000424953 CCNYL3P0C7X3 344 aa9.66□□□□□ -0.86
LINC02238-201ENST00000424953 CTDSPL2Q05D32 466 aa9.66□□□□□ -0.86
LINC02238-201ENST00000424953 NRG2O14511 850 aaPredicted RBP9.65□□□□□ -0.86
LINC02238-201ENST00000424953 AP1G2O75843 785 aa9.65□□□□□ -0.86
LINC02238-201ENST00000424953 SLC19A1P41440 591 aa9.65□□□□□ -0.86
LINC02238-201ENST00000424953 LIAT1Q6ZQX7 453 aa9.65□□□□□ -0.86
LINC02238-201ENST00000424953 TRAF7Q6Q0C0 670 aa9.64□□□□□ -0.87
LINC02238-201ENST00000424953 EVA1BQ9NVM1 165 aa9.64□□□□□ -0.87
LINC02238-201ENST00000424953 PTCRAQ6ISU1 281 aaPredicted RBP9.63□□□□□ -0.87
LINC02238-201ENST00000424953 ZBTB24O43167 697 aaPredicted RBP9.62□□□□□ -0.87
LINC02238-201ENST00000424953 KCNH2Q12809 1159 aa9.62□□□□□ -0.87
LINC02238-201ENST00000424953 F12P00748 615 aaPredicted RBP9.61□□□□□ -0.87
LINC02238-201ENST00000424953 CTHP32929 405 aa9.61□□□□□ -0.87
LINC02238-201ENST00000424953 RPIAP49247 311 aa9.61□□□□□ -0.87
LINC02238-201ENST00000424953 TMEM259Q4ZIN3 620 aa9.61□□□□□ -0.87
LINC02238-201ENST00000424953 LRRN4Q8WUT4 740 aa9.61□□□□□ -0.87
LINC02238-201ENST00000424953 MAP10Q9P2G4 905 aa9.61□□□□□ -0.87
LINC02238-201ENST00000424953 USP17L8P0C7I0 530 aa9.6□□□□□ -0.87
LINC02238-201ENST00000424953 SPRYD7Q5W111 196 aa9.6□□□□□ -0.87
LINC02238-201ENST00000424953 UNC93B1Q9H1C4 597 aa9.59□□□□□ -0.87
LINC02238-201ENST00000424953 PDZRN3Q9UPQ7 1066 aa9.59□□□□□ -0.87
LINC02238-201ENST00000424953 TRIM32Q13049 653 aa9.58□□□□□ -0.88
LINC02238-201ENST00000424953 CD2BP2O95400 341 aaKnown RBP9.57□□□□□ -0.88
LINC02238-201ENST00000424953 ZNF598Q86UK7 904 aaKnown RBP9.57□□□□□ -0.88
LINC02238-201ENST00000424953 ZNF697Q5TEC3 545 aa9.56□□□□□ -0.88
LINC02238-201ENST00000424953 HMX1Q9NP08 348 aaPredicted RBP9.56□□□□□ -0.88
LINC02238-201ENST00000424953 LCE2BO14633 110 aa9.55□□□□□ -0.88
LINC02238-201ENST00000424953 NR6A1Q15406 480 aa9.55□□□□□ -0.88
LINC02238-201ENST00000424953 BANK1Q8NDB2 785 aa9.55□□□□□ -0.88
LINC02238-201ENST00000424953 BAP1Q92560 729 aa9.54□□□□□ -0.88
LINC02238-201ENST00000424953 LINC01559Q495D7 138 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms