RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 SIRT1Q96EB6 747 aa28.65■■■□□ 2.18
FBXO28-202ENST00000424254 CDC42BPGQ6DT37 1551 aa28.64■■■□□ 2.18
FBXO28-202ENST00000424254 ORAI2Q96SN7 254 aa28.64■■■□□ 2.17
FBXO28-202ENST00000424254 ADGRB1O14514 1584 aa28.64■■■□□ 2.17
FBXO28-202ENST00000424254 PRAM1Q96QH2 718 aa28.59■■■□□ 2.17
FBXO28-202ENST00000424254 RGS17Q9UGC6 210 aaPredicted RBP28.58■■■□□ 2.17
FBXO28-202ENST00000424254 NHSL1Q5SYE7 1610 aa28.58■■■□□ 2.17
FBXO28-202ENST00000424254 DLC1Q96QB1 1528 aa28.56■■■□□ 2.16
FBXO28-202ENST00000424254 NUTM2FA1L443 756 aa28.56■■■□□ 2.16
FBXO28-202ENST00000424254 TRIM26Q12899 539 aaPredicted RBP28.56■■■□□ 2.16
FBXO28-202ENST00000424254 SAFB2Q14151 953 aaKnown RBP eCLIP28.56■■■□□ 2.169e-6■■■□□ 17.7
FBXO28-202ENST00000424254 SPATA31A6Q5VVP1 1343 aa28.56■■■□□ 2.16
FBXO28-202ENST00000424254 TRAK1Q9UPV9 953 aa28.55■■■□□ 2.16
FBXO28-202ENST00000424254 ESCO1Q5FWF5 840 aa28.54■■■□□ 2.16
FBXO28-202ENST00000424254 LRP6O75581 1613 aa28.53■■■□□ 2.16
FBXO28-202ENST00000424254 LRRC59Q96AG4 307 aaKnown RBP28.53■■■□□ 2.16
FBXO28-202ENST00000424254 SIN3AQ96ST3 1273 aa28.52■■■□□ 2.16
FBXO28-202ENST00000424254 POGKQ9P215 609 aa28.52■■■□□ 2.16
FBXO28-202ENST00000424254 SOS2Q07890 1332 aaPredicted RBP28.5■■■□□ 2.15
FBXO28-202ENST00000424254 SHPRHQ149N8 1683 aa28.5■■■□□ 2.15
FBXO28-202ENST00000424254 SOCS7O14512 581 aa28.47■■■□□ 2.15
FBXO28-202ENST00000424254 PNPLA6Q8IY17 1366 aa28.47■■■□□ 2.15
FBXO28-202ENST00000424254 L3MBTL2Q969R5 705 aa28.46■■■□□ 2.15
FBXO28-202ENST00000424254 NUTM2BA6NNL0 878 aaPredicted RBP28.45■■■□□ 2.15
FBXO28-202ENST00000424254 NUTM2EB1AL46 878 aaPredicted RBP28.45■■■□□ 2.15
FBXO28-202ENST00000424254 NUTM2AQ8IVF1 878 aaPredicted RBP28.45■■■□□ 2.15
FBXO28-202ENST00000424254 FMN2Q9NZ56 1722 aa28.45■■■□□ 2.14
FBXO28-202ENST00000424254 NPHP3Q7Z494 1330 aa28.45■■■□□ 2.14
FBXO28-202ENST00000424254 FOXO3O43524 673 aa28.44■■■□□ 2.14
FBXO28-202ENST00000424254 NEUROD1Q13562 356 aa28.44■■■□□ 2.14
FBXO28-202ENST00000424254 HIRIP3Q9BW71 556 aaPredicted RBP28.43■■■□□ 2.14
FBXO28-202ENST00000424254 MEX3CQ5U5Q3 659 aaKnown RBP28.43■■■□□ 2.14
FBXO28-202ENST00000424254 POTEAQ6S8J7 498 aa28.43■■■□□ 2.14
FBXO28-202ENST00000424254 MINK1Q8N4C8 1332 aaPredicted RBP28.42■■■□□ 2.14
FBXO28-202ENST00000424254 XPCQ01831 940 aaPredicted RBP28.42■■■□□ 2.14
FBXO28-202ENST00000424254 NBPF1Q3BBV0 1214 aa28.42■■■□□ 2.14
FBXO28-202ENST00000424254 PXDNQ92626 1479 aa28.41■■■□□ 2.14
FBXO28-202ENST00000424254 ADGRB2O60241 1585 aa28.4■■■□□ 2.14
FBXO28-202ENST00000424254 PHF8Q9UPP1 1060 aa28.36■■■□□ 2.13
FBXO28-202ENST00000424254 KIAA1210Q9ULL0 1709 aa28.36■■■□□ 2.13
FBXO28-202ENST00000424254 ANKARQ7Z5J8 1434 aa28.35■■■□□ 2.13
FBXO28-202ENST00000424254 ARHGEF28Q8N1W1 1705 aaKnown RBP28.34■■■□□ 2.13
FBXO28-202ENST00000424254 WASLO00401 505 aaPredicted RBP28.33■■■□□ 2.13
FBXO28-202ENST00000424254 KIF1AQ12756 1690 aa28.32■■■□□ 2.12
FBXO28-202ENST00000424254 PRR36Q9H6K5 1346 aa28.32■■■□□ 2.12
FBXO28-202ENST00000424254 USP32Q8NFA0 1604 aa28.31■■■□□ 2.12
FBXO28-202ENST00000424254 KRT28Q7Z3Y7 464 aa28.3■■■□□ 2.12
FBXO28-202ENST00000424254 PMFBP1Q8TBY8 1022 aa28.29■■■□□ 2.12
FBXO28-202ENST00000424254 TULP4Q9NRJ4 1543 aa28.29■■■□□ 2.12
FBXO28-202ENST00000424254 EIF3AQ14152 1382 aaKnown RBP28.29■■■□□ 2.12
FBXO28-202ENST00000424254 ADAMTS2O95450 1211 aa28.28■■■□□ 2.12
FBXO28-202ENST00000424254 ZNF772Q68DY9 489 aaPredicted RBP28.28■■■□□ 2.12
FBXO28-202ENST00000424254 C8orf37Q96NL8 207 aa28.27■■■□□ 2.12
FBXO28-202ENST00000424254 SPATA31A3Q5VYP0 1347 aa28.27■■■□□ 2.12
FBXO28-202ENST00000424254 AFF2P51816 1311 aa28.26■■■□□ 2.11
FBXO28-202ENST00000424254 COL22A1Q8NFW1 1626 aaPredicted RBP28.25■■■□□ 2.11
FBXO28-202ENST00000424254 RGPD8O14715 1765 aaPredicted RBP28.25■■■□□ 2.11
FBXO28-202ENST00000424254 PSME1Q06323 249 aa28.22■■■□□ 2.11
FBXO28-202ENST00000424254 NBPF8Q3BBV2 869 aa28.22■■■□□ 2.11
FBXO28-202ENST00000424254 CDK19Q9BWU1 502 aa28.22■■■□□ 2.11
FBXO28-202ENST00000424254 CENPJQ9HC77 1338 aaPredicted RBP28.21■■■□□ 2.11
FBXO28-202ENST00000424254 ATP7BP35670 1465 aa28.21■■■□□ 2.11
FBXO28-202ENST00000424254 TNS3Q68CZ2 1445 aa28.21■■■□□ 2.11
FBXO28-202ENST00000424254 NUDT16Q96DE0 195 aaKnown RBP28.2■■■□□ 2.11
FBXO28-202ENST00000424254 TRPM1Q7Z4N2 1603 aa28.2■■■□□ 2.1
FBXO28-202ENST00000424254 SBNO1A3KN83 1393 aa28.2■■■□□ 2.1
FBXO28-202ENST00000424254 ROCK2O75116 1388 aaKnown RBP28.2■■■□□ 2.1
FBXO28-202ENST00000424254 NGLY1Q96IV0 654 aa28.19■■■□□ 2.1
FBXO28-202ENST00000424254 TONSLQ96HA7 1378 aa28.19■■■□□ 2.1
FBXO28-202ENST00000424254 NGDNQ8NEJ9 315 aaKnown RBP28.15■■■□□ 2.1
FBXO28-202ENST00000424254 GPRASP1Q5JY77 1395 aa28.14■■■□□ 2.1
FBXO28-202ENST00000424254 LMOD2Q6P5Q4 547 aa28.14■■■□□ 2.09
FBXO28-202ENST00000424254 RXRBP28702 533 aa28.13■■■□□ 2.09
FBXO28-202ENST00000424254 FNBP4Q8N3X1 1017 aaPredicted RBP28.12■■■□□ 2.09
FBXO28-202ENST00000424254 ARHGEF10O15013 1369 aa28.12■■■□□ 2.09
FBXO28-202ENST00000424254 CABLES1Q8TDN4 633 aa28.11■■■□□ 2.09
FBXO28-202ENST00000424254 QTRT2Q9H974 415 aaKnown RBP28.11■■■□□ 2.09
FBXO28-202ENST00000424254 CCDC61Q9Y6R9 512 aa28.11■■■□□ 2.09
FBXO28-202ENST00000424254 PLEKHG5O94827 1062 aa28.1■■■□□ 2.09
FBXO28-202ENST00000424254 USP21Q9UK80 565 aa28.1■■■□□ 2.09
FBXO28-202ENST00000424254 SRPK2P78362 688 aaKnown RBP28.09■■■□□ 2.09
FBXO28-202ENST00000424254 CABP2Q9NPB3 220 aa28.08■■■□□ 2.09
FBXO28-202ENST00000424254 TRPM3Q9HCF6 1732 aaPredicted RBP28.07■■■□□ 2.08
FBXO28-202ENST00000424254 PCGF6Q9BYE7 350 aa28.07■■■□□ 2.08
FBXO28-202ENST00000424254 QRICH2Q9H0J4 1663 aa28.07■■■□□ 2.08
FBXO28-202ENST00000424254 PLEKHG3A1L390 1219 aa28.06■■■□□ 2.08
FBXO28-202ENST00000424254 POLR3AO14802 1390 aaPredicted RBP28.05■■■□□ 2.08
FBXO28-202ENST00000424254 HAP1P54257 671 aaPredicted RBP28.05■■■□□ 2.08
FBXO28-202ENST00000424254 RALGAPBQ86X10 1494 aa28.05■■■□□ 2.08
FBXO28-202ENST00000424254 ACEP12821 1306 aa28.05■■■□□ 2.08
FBXO28-202ENST00000424254 TOPAZ1Q8N9V7 1692 aa28.05■■■□□ 2.08
FBXO28-202ENST00000424254 PAK3O75914 559 aaPredicted RBP28.04■■■□□ 2.08
FBXO28-202ENST00000424254 CARD11Q9BXL7 1154 aa28.04■■■□□ 2.08
FBXO28-202ENST00000424254 BCL9LQ86UU0 1499 aa28.04■■■□□ 2.08
FBXO28-202ENST00000424254 ITSN1Q15811 1721 aa28.04■■■□□ 2.08
FBXO28-202ENST00000424254 RBM6P78332 1123 aaKnown RBP28.03■■■□□ 2.08
FBXO28-202ENST00000424254 TRPC5Q9UL62 973 aaPredicted RBP28.02■■■□□ 2.08
FBXO28-202ENST00000424254 PPIP5K1Q6PFW1 1433 aa28.02■■■□□ 2.08
FBXO28-202ENST00000424254 CDK12Q9NYV4 1490 aaPredicted RBP28.01■■■□□ 2.08
FBXO28-202ENST00000424254 EVC2Q86UK5 1308 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms