RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 MED1Q15648 1581 aaPredicted RBP21.4■■□□□ 1.02
FAM3A-209ENST00000421517 DISP3Q9P2K9 1392 aa21.39■■□□□ 1.02
FAM3A-209ENST00000421517 NHSL1Q5SYE7 1610 aa21.39■■□□□ 1.01
FAM3A-209ENST00000421517 PLEKHH1Q9ULM0 1364 aa21.38■■□□□ 1.01
FAM3A-209ENST00000421517 SPATA31A6Q5VVP1 1343 aa21.36■■□□□ 1.01
FAM3A-209ENST00000421517 L3MBTL2Q969R5 705 aa21.36■■□□□ 1.01
FAM3A-209ENST00000421517 PRAM1Q96QH2 718 aa21.36■■□□□ 1.01
FAM3A-209ENST00000421517 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
FAM3A-209ENST00000421517 LRRC59Q96AG4 307 aaKnown RBP21.35■■□□□ 1.01
FAM3A-209ENST00000421517 SIN3AQ96ST3 1273 aa21.34■■□□□ 1.01
FAM3A-209ENST00000421517 SOS2Q07890 1332 aaPredicted RBP21.33■■□□□ 1.01
FAM3A-209ENST00000421517 POGKQ9P215 609 aa21.33■■□□□ 1.01
FAM3A-209ENST00000421517 SHPRHQ149N8 1683 aa21.32■■□□□ 1
FAM3A-209ENST00000421517 EIF3AQ14152 1382 aaKnown RBP21.32■■□□□ 1
FAM3A-209ENST00000421517 FMN2Q9NZ56 1722 aa21.32■■□□□ 1
FAM3A-209ENST00000421517 ANKARQ7Z5J8 1434 aa21.31■■□□□ 1
FAM3A-209ENST00000421517 ORAI2Q96SN7 254 aa21.31■■□□□ 1
FAM3A-209ENST00000421517 TRAK1Q9UPV9 953 aa21.31■■□□□ 1
FAM3A-209ENST00000421517 NPHP3Q7Z494 1330 aa21.3■■□□□ 1
FAM3A-209ENST00000421517 ESCO1Q5FWF5 840 aa21.28■■□□□ 1
FAM3A-209ENST00000421517 CLSPNQ9HAW4 1339 aa21.28■■□□□ 1
FAM3A-209ENST00000421517 KIF1AQ12756 1690 aa21.27■■□□□ 1
FAM3A-209ENST00000421517 ARHGEF28Q8N1W1 1705 aaKnown RBP21.26■□□□□ 0.99
FAM3A-209ENST00000421517 NEUROD1Q13562 356 aa21.26■□□□□ 0.99
FAM3A-209ENST00000421517 WASLO00401 505 aaPredicted RBP21.24■□□□□ 0.99
FAM3A-209ENST00000421517 NBPF1Q3BBV0 1214 aa21.24■□□□□ 0.99
FAM3A-209ENST00000421517 PHF23Q9BUL5 403 aaPredicted RBP21.23■□□□□ 0.99
FAM3A-209ENST00000421517 PXDNQ92626 1479 aa21.23■□□□□ 0.99
FAM3A-209ENST00000421517 GPRASP1Q5JY77 1395 aa21.23■□□□□ 0.99
FAM3A-209ENST00000421517 PNPLA6Q8IY17 1366 aa21.23■□□□□ 0.99
FAM3A-209ENST00000421517 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
FAM3A-209ENST00000421517 TULP4Q9NRJ4 1543 aa21.22■□□□□ 0.99
FAM3A-209ENST00000421517 TONSLQ96HA7 1378 aa21.22■□□□□ 0.99
FAM3A-209ENST00000421517 SAFB2Q14151 953 aaKnown RBP eCLIP21.2■□□□□ 0.98
FAM3A-209ENST00000421517 TIMELESSQ9UNS1 1208 aa21.2■□□□□ 0.98
FAM3A-209ENST00000421517 PHF8Q9UPP1 1060 aa21.2■□□□□ 0.98
FAM3A-209ENST00000421517 FOXO3O43524 673 aa21.19■□□□□ 0.98
FAM3A-209ENST00000421517 DDX17Q92841 729 aaKnown RBP21.19■□□□□ 0.98
FAM3A-209ENST00000421517 USP32Q8NFA0 1604 aa21.18■□□□□ 0.98
FAM3A-209ENST00000421517 COL22A1Q8NFW1 1626 aaPredicted RBP21.18■□□□□ 0.98
FAM3A-209ENST00000421517 PSME1Q06323 249 aa21.17■□□□□ 0.98
FAM3A-209ENST00000421517 MINK1Q8N4C8 1332 aaPredicted RBP21.17■□□□□ 0.98
FAM3A-209ENST00000421517 CENPJQ9HC77 1338 aaPredicted RBP21.17■□□□□ 0.98
FAM3A-209ENST00000421517 LRP6O75581 1613 aa21.17■□□□□ 0.98
FAM3A-209ENST00000421517 SBNO1A3KN83 1393 aa21.16■□□□□ 0.98
FAM3A-209ENST00000421517 ROCK2O75116 1388 aaKnown RBP21.16■□□□□ 0.98
FAM3A-209ENST00000421517 NUTM2FA1L443 756 aa21.16■□□□□ 0.98
FAM3A-209ENST00000421517 RGS17Q9UGC6 210 aaPredicted RBP21.16■□□□□ 0.98
FAM3A-209ENST00000421517 ILDR2Q71H61 639 aa21.15■□□□□ 0.98
FAM3A-209ENST00000421517 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.97
FAM3A-209ENST00000421517 SPATA31A3Q5VYP0 1347 aa21.13■□□□□ 0.97
FAM3A-209ENST00000421517 PRR36Q9H6K5 1346 aa21.13■□□□□ 0.97
FAM3A-209ENST00000421517 NBPF8Q3BBV2 869 aa21.13■□□□□ 0.97
FAM3A-209ENST00000421517 KRT28Q7Z3Y7 464 aa21.13■□□□□ 0.97
FAM3A-209ENST00000421517 ATP7BP35670 1465 aa21.13■□□□□ 0.97
FAM3A-209ENST00000421517 RALGAPBQ86X10 1494 aa21.13■□□□□ 0.97
FAM3A-209ENST00000421517 ZNF772Q68DY9 489 aaPredicted RBP21.12■□□□□ 0.97
FAM3A-209ENST00000421517 SBNO2Q9Y2G9 1366 aa21.11■□□□□ 0.97
FAM3A-209ENST00000421517 CDK19Q9BWU1 502 aa21.11■□□□□ 0.97
FAM3A-209ENST00000421517 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
FAM3A-209ENST00000421517 CCDC61Q9Y6R9 512 aa21.11■□□□□ 0.97
FAM3A-209ENST00000421517 RGPD8O14715 1765 aaPredicted RBP21.1■□□□□ 0.97
FAM3A-209ENST00000421517 ITSN1Q15811 1721 aa21.1■□□□□ 0.97
FAM3A-209ENST00000421517 NUDT16Q96DE0 195 aaKnown RBP21.1■□□□□ 0.97
FAM3A-209ENST00000421517 MEX3CQ5U5Q3 659 aaKnown RBP21.09■□□□□ 0.97
FAM3A-209ENST00000421517 TNS3Q68CZ2 1445 aa21.09■□□□□ 0.97
FAM3A-209ENST00000421517 ARHGEF10O15013 1369 aa21.09■□□□□ 0.97
FAM3A-209ENST00000421517 PLEKHG3A1L390 1219 aa21.08■□□□□ 0.97
FAM3A-209ENST00000421517 POLR3AO14802 1390 aaPredicted RBP21.08■□□□□ 0.96
FAM3A-209ENST00000421517 SOCS7O14512 581 aa21.06■□□□□ 0.96
FAM3A-209ENST00000421517 SLC24A1O60721 1099 aa21.06■□□□□ 0.96
FAM3A-209ENST00000421517 BRD4O60885 1362 aaPredicted RBP21.06■□□□□ 0.96
FAM3A-209ENST00000421517 TOPAZ1Q8N9V7 1692 aa21.05■□□□□ 0.96
FAM3A-209ENST00000421517 QRICH2Q9H0J4 1663 aa21.05■□□□□ 0.96
FAM3A-209ENST00000421517 NUTM2BA6NNL0 878 aaPredicted RBP21.05■□□□□ 0.96
FAM3A-209ENST00000421517 NUTM2EB1AL46 878 aaPredicted RBP21.05■□□□□ 0.96
FAM3A-209ENST00000421517 NUTM2AQ8IVF1 878 aaPredicted RBP21.05■□□□□ 0.96
FAM3A-209ENST00000421517 PMFBP1Q8TBY8 1022 aa21.05■□□□□ 0.96
FAM3A-209ENST00000421517 CARD11Q9BXL7 1154 aa21.05■□□□□ 0.96
FAM3A-209ENST00000421517 EVC2Q86UK5 1308 aa21.04■□□□□ 0.96
FAM3A-209ENST00000421517 XPCQ01831 940 aaPredicted RBP21.03■□□□□ 0.96
FAM3A-209ENST00000421517 FNBP4Q8N3X1 1017 aaPredicted RBP21.03■□□□□ 0.96
FAM3A-209ENST00000421517 NGDNQ8NEJ9 315 aaKnown RBP21.03■□□□□ 0.96
FAM3A-209ENST00000421517 TRPM3Q9HCF6 1732 aaPredicted RBP21.02■□□□□ 0.96
FAM3A-209ENST00000421517 POTEAQ6S8J7 498 aa21.02■□□□□ 0.96
FAM3A-209ENST00000421517 PUS7Q96PZ0 661 aaKnown RBP21.02■□□□□ 0.96
FAM3A-209ENST00000421517 SRPK2P78362 688 aaKnown RBP21■□□□□ 0.95
FAM3A-209ENST00000421517 AFF2P51816 1311 aa21■□□□□ 0.95
FAM3A-209ENST00000421517 ALS2Q96Q42 1657 aa20.99■□□□□ 0.95
FAM3A-209ENST00000421517 CDK12Q9NYV4 1490 aaPredicted RBP20.98■□□□□ 0.95
FAM3A-209ENST00000421517 ACEP12821 1306 aa20.98■□□□□ 0.95
FAM3A-209ENST00000421517 ATAD2Q6PL18 1390 aa20.97■□□□□ 0.95
FAM3A-209ENST00000421517 PPIP5K1Q6PFW1 1433 aa20.97■□□□□ 0.95
FAM3A-209ENST00000421517 NGLY1Q96IV0 654 aa20.97■□□□□ 0.95
FAM3A-209ENST00000421517 C8orf37Q96NL8 207 aa20.97■□□□□ 0.95
FAM3A-209ENST00000421517 MARF1Q9Y4F3 1742 aaKnown RBP20.96■□□□□ 0.95
FAM3A-209ENST00000421517 ADAMTS2O95450 1211 aa20.96■□□□□ 0.95
FAM3A-209ENST00000421517 CABP2Q9NPB3 220 aa20.96■□□□□ 0.95
FAM3A-209ENST00000421517 ZNF692Q9BU19 519 aaPredicted RBP20.94■□□□□ 0.94
FAM3A-209ENST00000421517 SLIT2O94813 1529 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms