RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 TRPM1Q7Z4N2 1603 aa25.71■■□□□ 1.71
MSL3-208ENST00000421368 TRAK1Q9UPV9 953 aa25.68■■□□□ 1.7
MSL3-208ENST00000421368 PHLPP1O60346 1717 aa25.67■■□□□ 1.7
MSL3-208ENST00000421368 TONSLQ96HA7 1378 aa25.67■■□□□ 1.7
MSL3-208ENST00000421368 FMN2Q9NZ56 1722 aa25.66■■□□□ 1.7
MSL3-208ENST00000421368 NBPF1Q3BBV0 1214 aa25.66■■□□□ 1.7
MSL3-208ENST00000421368 PRAM1Q96QH2 718 aa25.66■■□□□ 1.7
MSL3-208ENST00000421368 C1orf167Q5SNV9 1468 aa25.65■■□□□ 1.7
MSL3-208ENST00000421368 SAFB2Q14151 953 aaKnown RBP eCLIP25.63■■□□□ 1.69
MSL3-208ENST00000421368 AHDC1Q5TGY3 1603 aaPredicted RBP25.63■■□□□ 1.69
MSL3-208ENST00000421368 RGPD8O14715 1765 aaPredicted RBP25.62■■□□□ 1.69
MSL3-208ENST00000421368 BRINP3Q76B58 766 aa25.62■■□□□ 1.69
MSL3-208ENST00000421368 POGKQ9P215 609 aa25.62■■□□□ 1.69
MSL3-208ENST00000421368 NHSL1Q5SYE7 1610 aa25.62■■□□□ 1.69
MSL3-208ENST00000421368 ADGRB2O60241 1585 aa25.61■■□□□ 1.69
MSL3-208ENST00000421368 COL16A1Q07092 1604 aaPredicted RBP25.6■■□□□ 1.69
MSL3-208ENST00000421368 NBPF8Q3BBV2 869 aa25.6■■□□□ 1.69
MSL3-208ENST00000421368 CLSPNQ9HAW4 1339 aa25.59■■□□□ 1.69
MSL3-208ENST00000421368 ORAI2Q96SN7 254 aa25.54■■□□□ 1.68
MSL3-208ENST00000421368 USP32Q8NFA0 1604 aa25.53■■□□□ 1.68
MSL3-208ENST00000421368 NUTM2FA1L443 756 aa25.53■■□□□ 1.68
MSL3-208ENST00000421368 MINK1Q8N4C8 1332 aaPredicted RBP25.53■■□□□ 1.68
MSL3-208ENST00000421368 ROCK2O75116 1388 aaKnown RBP25.53■■□□□ 1.68
MSL3-208ENST00000421368 QRICH2Q9H0J4 1663 aa25.52■■□□□ 1.68
MSL3-208ENST00000421368 HIRIP3Q9BW71 556 aaPredicted RBP25.52■■□□□ 1.68
MSL3-208ENST00000421368 CCER1Q8TC90 406 aaPredicted RBP25.51■■□□□ 1.67
MSL3-208ENST00000421368 RALGAPBQ86X10 1494 aa25.51■■□□□ 1.67
MSL3-208ENST00000421368 GPRASP1Q5JY77 1395 aa25.5■■□□□ 1.67
MSL3-208ENST00000421368 KIF1AQ12756 1690 aa25.49■■□□□ 1.67
MSL3-208ENST00000421368 DDX17Q92841 729 aaKnown RBP25.49■■□□□ 1.67
MSL3-208ENST00000421368 MED1Q15648 1581 aaPredicted RBP25.48■■□□□ 1.67
MSL3-208ENST00000421368 ESCO1Q5FWF5 840 aa25.47■■□□□ 1.67
MSL3-208ENST00000421368 SHPRHQ149N8 1683 aa25.47■■□□□ 1.67
MSL3-208ENST00000421368 TULP4Q9NRJ4 1543 aa25.46■■□□□ 1.67
MSL3-208ENST00000421368 CENPJQ9HC77 1338 aaPredicted RBP25.45■■□□□ 1.66
MSL3-208ENST00000421368 ANKARQ7Z5J8 1434 aa25.45■■□□□ 1.66
MSL3-208ENST00000421368 WASLO00401 505 aaPredicted RBP25.44■■□□□ 1.66
MSL3-208ENST00000421368 JCADQ9P266 1359 aa25.44■■□□□ 1.66
MSL3-208ENST00000421368 ITSN1Q15811 1721 aa25.43■■□□□ 1.66
MSL3-208ENST00000421368 TIMELESSQ9UNS1 1208 aa25.42■■□□□ 1.66
MSL3-208ENST00000421368 PRR36Q9H6K5 1346 aa25.41■■□□□ 1.66
MSL3-208ENST00000421368 EIF3AQ14152 1382 aaKnown RBP25.41■■□□□ 1.66
MSL3-208ENST00000421368 PXDNQ92626 1479 aa25.4■■□□□ 1.66
MSL3-208ENST00000421368 CARD11Q9BXL7 1154 aa25.4■■□□□ 1.66
MSL3-208ENST00000421368 SOS2Q07890 1332 aaPredicted RBP25.39■■□□□ 1.66
MSL3-208ENST00000421368 ATP7BP35670 1465 aa25.39■■□□□ 1.65
MSL3-208ENST00000421368 TOPAZ1Q8N9V7 1692 aa25.39■■□□□ 1.65
MSL3-208ENST00000421368 NPHP3Q7Z494 1330 aa25.38■■□□□ 1.65
MSL3-208ENST00000421368 FOXO3O43524 673 aa25.38■■□□□ 1.65
MSL3-208ENST00000421368 CDK19Q9BWU1 502 aa25.37■■□□□ 1.65
MSL3-208ENST00000421368 PHF8Q9UPP1 1060 aa25.37■■□□□ 1.65
MSL3-208ENST00000421368 LRRC59Q96AG4 307 aaKnown RBP25.36■■□□□ 1.65
MSL3-208ENST00000421368 DISP3Q9P2K9 1392 aa25.34■■□□□ 1.65
MSL3-208ENST00000421368 XPCQ01831 940 aaPredicted RBP25.34■■□□□ 1.65
MSL3-208ENST00000421368 NUDT16Q96DE0 195 aaKnown RBP25.33■■□□□ 1.65
MSL3-208ENST00000421368 PNPLA6Q8IY17 1366 aa25.32■■□□□ 1.64
MSL3-208ENST00000421368 PMFBP1Q8TBY8 1022 aa25.32■■□□□ 1.64
MSL3-208ENST00000421368 LRP6O75581 1613 aa25.31■■□□□ 1.64
MSL3-208ENST00000421368 SPATA31A6Q5VVP1 1343 aa25.31■■□□□ 1.64
MSL3-208ENST00000421368 COL22A1Q8NFW1 1626 aaPredicted RBP25.3■■□□□ 1.64
MSL3-208ENST00000421368 TRPM3Q9HCF6 1732 aaPredicted RBP25.3■■□□□ 1.64
MSL3-208ENST00000421368 KRT28Q7Z3Y7 464 aa25.28■■□□□ 1.64
MSL3-208ENST00000421368 SBNO2Q9Y2G9 1366 aa25.28■■□□□ 1.64
MSL3-208ENST00000421368 SRPK2P78362 688 aaKnown RBP25.27■■□□□ 1.64
MSL3-208ENST00000421368 CABP2Q9NPB3 220 aa25.27■■□□□ 1.64
MSL3-208ENST00000421368 EVC2Q86UK5 1308 aa25.26■■□□□ 1.63
MSL3-208ENST00000421368 PSME1Q06323 249 aa25.24■■□□□ 1.63
MSL3-208ENST00000421368 CCDC61Q9Y6R9 512 aa25.24■■□□□ 1.63
MSL3-208ENST00000421368 ALS2Q96Q42 1657 aa25.23■■□□□ 1.63
MSL3-208ENST00000421368 SPATA31A3Q5VYP0 1347 aa25.23■■□□□ 1.63
MSL3-208ENST00000421368 TNS3Q68CZ2 1445 aa25.22■■□□□ 1.63
MSL3-208ENST00000421368 SBNO1A3KN83 1393 aa25.22■■□□□ 1.63
MSL3-208ENST00000421368 NUTM2BA6NNL0 878 aaPredicted RBP25.22■■□□□ 1.63
MSL3-208ENST00000421368 NUTM2EB1AL46 878 aaPredicted RBP25.22■■□□□ 1.63
MSL3-208ENST00000421368 NUTM2AQ8IVF1 878 aaPredicted RBP25.22■■□□□ 1.63
MSL3-208ENST00000421368 NGDNQ8NEJ9 315 aaKnown RBP25.22■■□□□ 1.63
MSL3-208ENST00000421368 PPIP5K1Q6PFW1 1433 aa25.21■■□□□ 1.63
MSL3-208ENST00000421368 POLR3AO14802 1390 aaPredicted RBP25.2■■□□□ 1.63
MSL3-208ENST00000421368 USP47Q96K76 1375 aa25.2■■□□□ 1.63
MSL3-208ENST00000421368 ST20-MTHFSA0A0A6YYL1 179 aa25.2■■□□□ 1.62
MSL3-208ENST00000421368 PLEKHG3A1L390 1219 aa25.2■■□□□ 1.62
MSL3-208ENST00000421368 PHF23Q9BUL5 403 aaPredicted RBP25.2■■□□□ 1.62
MSL3-208ENST00000421368 MARF1Q9Y4F3 1742 aaKnown RBP25.2■■□□□ 1.62
MSL3-208ENST00000421368 ABCA3Q99758 1704 aa25.19■■□□□ 1.62
MSL3-208ENST00000421368 ACEP12821 1306 aa25.18■■□□□ 1.62
MSL3-208ENST00000421368 TESK2Q96S53 571 aa25.17■■□□□ 1.62
MSL3-208ENST00000421368 AKAP12Q02952 1782 aa25.16■■□□□ 1.62
MSL3-208ENST00000421368 MEX3CQ5U5Q3 659 aaKnown RBP25.15■■□□□ 1.62
MSL3-208ENST00000421368 RGS17Q9UGC6 210 aaPredicted RBP25.15■■□□□ 1.62
MSL3-208ENST00000421368 CABP1Q9NZU7 370 aa25.14■■□□□ 1.62
MSL3-208ENST00000421368 ARHGEF10O15013 1369 aa25.14■■□□□ 1.61
MSL3-208ENST00000421368 CRYBG1Q9Y4K1 1723 aa25.13■■□□□ 1.61
MSL3-208ENST00000421368 ATAD2Q6PL18 1390 aa25.13■■□□□ 1.61
MSL3-208ENST00000421368 LMOD2Q6P5Q4 547 aa25.11■■□□□ 1.61
MSL3-208ENST00000421368 ADAMTS2O95450 1211 aa25.1■■□□□ 1.61
MSL3-208ENST00000421368 PAK3O75914 559 aaPredicted RBP25.09■■□□□ 1.61
MSL3-208ENST00000421368 ILDR2Q71H61 639 aa25.08■■□□□ 1.61
MSL3-208ENST00000421368 MON2Q7Z3U7 1717 aa25.08■■□□□ 1.61
MSL3-208ENST00000421368 USP6P35125 1406 aa25.07■■□□□ 1.6
MSL3-208ENST00000421368 CABLES1Q8TDN4 633 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 260.2 ms