RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 NUTM2AQ8IVF1 878 aaPredicted RBP5.51□□□□□ -1.53
VPS41-206ENST00000418457 SPDYE5A6NIY4 337 aa5.5□□□□□ -1.53
VPS41-206ENST00000418457 C6orf229H3BNL8 230 aa5.5□□□□□ -1.53
VPS41-206ENST00000418457 HRCP23327 699 aa5.5□□□□□ -1.53
VPS41-206ENST00000418457 COPS2P61201 443 aa5.5□□□□□ -1.53
VPS41-206ENST00000418457 MMRN1Q13201 1228 aa5.5□□□□□ -1.53
VPS41-206ENST00000418457 QPCTQ16769 361 aa5.5□□□□□ -1.53
VPS41-206ENST00000418457 PPP2R2DQ66LE6 453 aa5.5□□□□□ -1.53
VPS41-206ENST00000418457 SCUBE3Q8IX30 993 aa5.5□□□□□ -1.53
VPS41-206ENST00000418457 CABLES1Q8TDN4 633 aa5.5□□□□□ -1.53
VPS41-206ENST00000418457 RFC5P40937 340 aa5.49□□□□□ -1.53
VPS41-206ENST00000418457 RTL5Q5HYW3 569 aaPredicted RBP5.49□□□□□ -1.53
VPS41-206ENST00000418457 RNF19BQ6ZMZ0 732 aa5.49□□□□□ -1.53
VPS41-206ENST00000418457 SYMPKQ92797 1274 aaKnown RBP5.49□□□□□ -1.53
VPS41-206ENST00000418457 MTRQ99707 1265 aa5.49□□□□□ -1.53
VPS41-206ENST00000418457 IL21Q9HBE4 155 aa5.49□□□□□ -1.53
VPS41-206ENST00000418457 SALL2Q9Y467 1007 aaPredicted RBP5.49□□□□□ -1.53
VPS41-206ENST00000418457 ZPR1O75312 459 aa5.48□□□□□ -1.53
VPS41-206ENST00000418457 FMNL1O95466 1100 aaPredicted RBP5.48□□□□□ -1.53
VPS41-206ENST00000418457 TJAP1Q5JTD0 557 aa5.48□□□□□ -1.53
VPS41-206ENST00000418457 FBXO31Q5XUX0 539 aaPredicted RBP5.48□□□□□ -1.53
VPS41-206ENST00000418457 RETREG3Q86VR2 466 aa5.48□□□□□ -1.53
VPS41-206ENST00000418457 TMEM259Q4ZIN3 620 aa5.47□□□□□ -1.53
VPS41-206ENST00000418457 BRICD5Q6PL45 260 aa5.47□□□□□ -1.53
VPS41-206ENST00000418457 THAP11Q96EK4 314 aa5.47□□□□□ -1.53
VPS41-206ENST00000418457 USB1Q9BQ65 265 aaKnown RBP5.47□□□□□ -1.53
VPS41-206ENST00000418457 AP1G2O75843 785 aa5.46□□□□□ -1.54
VPS41-206ENST00000418457 HELBQ8NG08 1087 aaPredicted RBP5.46□□□□□ -1.54
VPS41-206ENST00000418457 PRR7Q8TB68 274 aa5.46□□□□□ -1.54
VPS41-206ENST00000418457 TSC1Q92574 1164 aa5.46□□□□□ -1.54
VPS41-206ENST00000418457 ZNF516Q92618 1163 aa5.46□□□□□ -1.54
VPS41-206ENST00000418457 SPSB2Q99619 263 aa5.46□□□□□ -1.54
VPS41-206ENST00000418457 CFAP99D6REC4 459 aa5.45□□□□□ -1.54
VPS41-206ENST00000418457 TLL1O43897 1013 aa5.45□□□□□ -1.54
VPS41-206ENST00000418457 ADH1BP00325 375 aa5.45□□□□□ -1.54
VPS41-206ENST00000418457 FLIIQ13045 1269 aa5.45□□□□□ -1.54
VPS41-206ENST00000418457 BANK1Q8NDB2 785 aa5.45□□□□□ -1.54
VPS41-206ENST00000418457 ITGBL1O95965 494 aaPredicted RBP5.44□□□□□ -1.54
VPS41-206ENST00000418457 KCNC4Q03721 635 aa5.44□□□□□ -1.54
VPS41-206ENST00000418457 MSS51Q4VC12 460 aa5.44□□□□□ -1.54
VPS41-206ENST00000418457 USP17L8P0C7I0 530 aa5.43□□□□□ -1.54
VPS41-206ENST00000418457 DESI1Q6ICB0 168 aa5.43□□□□□ -1.54
VPS41-206ENST00000418457 JUNDP17535 347 aa5.42□□□□□ -1.54
VPS41-206ENST00000418457 CTDSPL2Q05D32 466 aa5.42□□□□□ -1.54
VPS41-206ENST00000418457 MCM6Q14566 821 aa5.42□□□□□ -1.54
VPS41-206ENST00000418457 ERICH6Q7L0X2 663 aa5.42□□□□□ -1.54
VPS41-206ENST00000418457 FAM160A2Q8N612 972 aaPredicted RBP5.42□□□□□ -1.54
VPS41-206ENST00000418457 NKX2-3Q8TAU0 364 aa5.42□□□□□ -1.54
VPS41-206ENST00000418457 SLC6A16Q9GZN6 736 aa5.42□□□□□ -1.54
VPS41-206ENST00000418457 C14orf37Q86TY3 774 aa5.41□□□□□ -1.54
VPS41-206ENST00000418457 PRDM9Q9NQV7 894 aa5.41□□□□□ -1.54
VPS41-206ENST00000418457 SNRKQ9NRH2 765 aa5.41□□□□□ -1.54
VPS41-206ENST00000418457 APBB1O00213 710 aa5.4□□□□□ -1.54
VPS41-206ENST00000418457 PER1O15534 1290 aaPredicted RBP5.4□□□□□ -1.54
VPS41-206ENST00000418457 DXOO77932 396 aaKnown RBP5.4□□□□□ -1.54
VPS41-206ENST00000418457 MMP16P51512 607 aa5.4□□□□□ -1.54
VPS41-206ENST00000418457 PTPRNQ16849 979 aa5.4□□□□□ -1.54
VPS41-206ENST00000418457 LYPD8Q6UX82 237 aa5.4□□□□□ -1.54
VPS41-206ENST00000418457 SOCS7O14512 581 aa5.39□□□□□ -1.55
VPS41-206ENST00000418457 S1PR4O95977 384 aa5.39□□□□□ -1.55
VPS41-206ENST00000418457 UBTFP17480 764 aaKnown RBP5.39□□□□□ -1.55
VPS41-206ENST00000418457 MTMR14Q8NCE2 650 aa5.39□□□□□ -1.55
VPS41-206ENST00000418457 LRRN4Q8WUT4 740 aa5.39□□□□□ -1.55
VPS41-206ENST00000418457 CCNYL3P0C7X3 344 aa5.38□□□□□ -1.55
VPS41-206ENST00000418457 GGCXP38435 758 aa5.38□□□□□ -1.55
VPS41-206ENST00000418457 NUDT12Q9BQG2 462 aa5.38□□□□□ -1.55
VPS41-206ENST00000418457 PRM3Q9NNZ6 103 aa5.38□□□□□ -1.55
VPS41-206ENST00000418457 HMX1Q9NP08 348 aaPredicted RBP5.38□□□□□ -1.55
VPS41-206ENST00000418457 TIMELESSQ9UNS1 1208 aa5.38□□□□□ -1.55
VPS41-206ENST00000418457 RAD21O60216 631 aa5.37□□□□□ -1.55
VPS41-206ENST00000418457 CTHP32929 405 aa5.37□□□□□ -1.55
VPS41-206ENST00000418457 CCDC24Q8N4L8 307 aa5.37□□□□□ -1.55
VPS41-206ENST00000418457 F12P00748 615 aaPredicted RBP5.36□□□□□ -1.55
VPS41-206ENST00000418457 NR6A1Q15406 480 aa5.36□□□□□ -1.55
VPS41-206ENST00000418457 IFFO2Q5TF58 517 aa5.36□□□□□ -1.55
VPS41-206ENST00000418457 GJD4Q96KN9 370 aaPredicted RBP5.36□□□□□ -1.55
VPS41-206ENST00000418457 EVA1BQ9NVM1 165 aa5.36□□□□□ -1.55
VPS41-206ENST00000418457 PLA2G2EQ9NZK7 142 aa5.36□□□□□ -1.55
VPS41-206ENST00000418457 FCF1Q9Y324 198 aaKnown RBP5.36□□□□□ -1.55
VPS41-206ENST00000418457 RNF223E7ERA6 249 aa5.35□□□□□ -1.55
VPS41-206ENST00000418457 PPEF1O14829 653 aaPredicted RBP5.35□□□□□ -1.55
VPS41-206ENST00000418457 KCNH2Q12809 1159 aa5.35□□□□□ -1.55
VPS41-206ENST00000418457 PPP1R18Q6NYC8 613 aa5.35□□□□□ -1.55
VPS41-206ENST00000418457 ANKLE1Q8NAG6 615 aa5.35□□□□□ -1.55
VPS41-206ENST00000418457 PNMA1Q8ND90 353 aa5.35□□□□□ -1.55
VPS41-206ENST00000418457 EPS8L1Q8TE68 723 aa5.35□□□□□ -1.55
VPS41-206ENST00000418457 CLUAP1Q96AJ1 413 aa5.35□□□□□ -1.55
VPS41-206ENST00000418457 TRIM34Q9BYJ4 488 aa5.35□□□□□ -1.55
VPS41-206ENST00000418457 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.35□□□□□ -1.55
VPS41-206ENST00000418457 MAP10Q9P2G4 905 aa5.35□□□□□ -1.55
VPS41-206ENST00000418457 COG6Q9Y2V7 657 aa5.35□□□□□ -1.55
VPS41-206ENST00000418457 NDUFB9Q9Y6M9 179 aa5.35□□□□□ -1.55
VPS41-206ENST00000418457 POM121Q96HA1 1249 aa5.34□□□□□ -1.55
VPS41-206ENST00000418457 ZMYND15Q9H091 742 aa5.34□□□□□ -1.55
VPS41-206ENST00000418457 GDPD2Q9HCC8 539 aa5.34□□□□□ -1.55
VPS41-206ENST00000418457 PLSCR2Q9NRY7 297 aa5.34□□□□□ -1.55
VPS41-206ENST00000418457 TBC1D2BQ9UPU7 963 aa5.34□□□□□ -1.55
VPS41-206ENST00000418457 ABL2P42684 1182 aa5.33□□□□□ -1.56
VPS41-206ENST00000418457 ARMC2Q8NEN0 867 aa5.33□□□□□ -1.56
VPS41-206ENST00000418457 A6NJR5 290 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms