RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 ATF3P18847 181 aa16.77■□□□□ 0.28
GABRE-202ENST00000417300 TRPC5Q9UL62 973 aaPredicted RBP16.77■□□□□ 0.28
GABRE-202ENST00000417300 DIP2AQ14689 1571 aa16.77■□□□□ 0.27
GABRE-202ENST00000417300 EIF4G2P78344 907 aaKnown RBP eCLIP16.76■□□□□ 0.27
GABRE-202ENST00000417300 USP21Q9UK80 565 aa16.75■□□□□ 0.27
GABRE-202ENST00000417300 ADAMTS2O95450 1211 aa16.74■□□□□ 0.27
GABRE-202ENST00000417300 CHGAP10645 457 aaKnown RBP16.74■□□□□ 0.27
GABRE-202ENST00000417300 LRRC59Q96AG4 307 aaKnown RBP16.74■□□□□ 0.27
GABRE-202ENST00000417300 ROCK2O75116 1388 aaKnown RBP16.74■□□□□ 0.27
GABRE-202ENST00000417300 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
GABRE-202ENST00000417300 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
GABRE-202ENST00000417300 BRINP3Q76B58 766 aa16.73■□□□□ 0.27
GABRE-202ENST00000417300 DEFB132Q7Z7B7 95 aa16.73■□□□□ 0.27
GABRE-202ENST00000417300 PSDA5PKW4 1024 aaPredicted RBP16.72■□□□□ 0.27
GABRE-202ENST00000417300 SF3B2Q13435 895 aaKnown RBP16.72■□□□□ 0.27
GABRE-202ENST00000417300 C19orf44Q9H6X5 657 aa16.72■□□□□ 0.27
GABRE-202ENST00000417300 USP47Q96K76 1375 aa16.72■□□□□ 0.27
GABRE-202ENST00000417300 PIK3C2GO75747 1445 aa16.71■□□□□ 0.27
GABRE-202ENST00000417300 NCOA3Q9Y6Q9 1424 aa16.71■□□□□ 0.27
GABRE-202ENST00000417300 CARD11Q9BXL7 1154 aa16.71■□□□□ 0.27
GABRE-202ENST00000417300 BLMP54132 1417 aaPredicted RBP16.7■□□□□ 0.26
GABRE-202ENST00000417300 ADGRF5Q8IZF2 1346 aa16.7■□□□□ 0.26
GABRE-202ENST00000417300 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
GABRE-202ENST00000417300 NHSL1Q5SYE7 1610 aa16.69■□□□□ 0.26
GABRE-202ENST00000417300 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
GABRE-202ENST00000417300 VGFO15240 615 aaPredicted RBP16.66■□□□□ 0.26
GABRE-202ENST00000417300 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
GABRE-202ENST00000417300 HIRIP3Q9BW71 556 aaPredicted RBP16.66■□□□□ 0.26
GABRE-202ENST00000417300 PNPLA6Q8IY17 1366 aa16.64■□□□□ 0.26
GABRE-202ENST00000417300 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.64■□□□□ 0.25
GABRE-202ENST00000417300 ATRNO75882 1429 aa16.63■□□□□ 0.25
GABRE-202ENST00000417300 RIMS2Q9UQ26 1411 aa16.63■□□□□ 0.25
GABRE-202ENST00000417300 FNBP4Q8N3X1 1017 aaPredicted RBP16.63■□□□□ 0.25
GABRE-202ENST00000417300 ADGRB1O14514 1584 aa16.63■□□□□ 0.25
GABRE-202ENST00000417300 C14orf93Q9H972 538 aaKnown RBP16.62■□□□□ 0.25
GABRE-202ENST00000417300 CFAP70Q5T0N1 1121 aa16.61■□□□□ 0.25
GABRE-202ENST00000417300 CHD2O14647 1828 aaKnown RBP16.61■□□□□ 0.25
GABRE-202ENST00000417300 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
GABRE-202ENST00000417300 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
GABRE-202ENST00000417300 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.59■□□□□ 0.25
GABRE-202ENST00000417300 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.24
GABRE-202ENST00000417300 WASHC2AQ641Q2 1341 aa16.58■□□□□ 0.24
GABRE-202ENST00000417300 EIF3AQ14152 1382 aaKnown RBP16.58■□□□□ 0.24
GABRE-202ENST00000417300 CCDC7Q96M83 1385 aa16.58■□□□□ 0.24
GABRE-202ENST00000417300 BCL9LQ86UU0 1499 aa16.58■□□□□ 0.24
GABRE-202ENST00000417300 DDX17Q92841 729 aaKnown RBP16.57■□□□□ 0.24
GABRE-202ENST00000417300 GJD4Q96KN9 370 aaPredicted RBP16.57■□□□□ 0.24
GABRE-202ENST00000417300 NRXN3Q9Y4C0 1643 aa16.56■□□□□ 0.24
GABRE-202ENST00000417300 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
GABRE-202ENST00000417300 TBX22Q9Y458 520 aa16.55■□□□□ 0.24
GABRE-202ENST00000417300 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
GABRE-202ENST00000417300 C11orf95C9JLR9 678 aaPredicted RBP16.54■□□□□ 0.24
GABRE-202ENST00000417300 PTCH1Q13635 1447 aa16.53■□□□□ 0.24
GABRE-202ENST00000417300 ARHGEF28Q8N1W1 1705 aaKnown RBP16.53■□□□□ 0.24
GABRE-202ENST00000417300 PLEKHG1Q9ULL1 1385 aa16.53■□□□□ 0.24
GABRE-202ENST00000417300 BAG6P46379 1132 aa16.53■□□□□ 0.24
GABRE-202ENST00000417300 R3HDM1Q15032 1099 aaKnown RBP16.53■□□□□ 0.24
GABRE-202ENST00000417300 TESK2Q96S53 571 aa16.53■□□□□ 0.24
GABRE-202ENST00000417300 DDX10Q13206 875 aaKnown RBP16.52■□□□□ 0.24
GABRE-202ENST00000417300 SBNO2Q9Y2G9 1366 aa16.51■□□□□ 0.23
GABRE-202ENST00000417300 DCCP43146 1447 aa16.5■□□□□ 0.23
GABRE-202ENST00000417300 C1QTNF8P60827 252 aa16.49■□□□□ 0.23
GABRE-202ENST00000417300 QRICH2Q9H0J4 1663 aa16.49■□□□□ 0.23
GABRE-202ENST00000417300 MST1RQ04912 1400 aa16.48■□□□□ 0.23
GABRE-202ENST00000417300 YTHDC2Q9H6S0 1430 aaKnown RBP16.48■□□□□ 0.23
GABRE-202ENST00000417300 SLC24A1O60721 1099 aa16.48■□□□□ 0.23
GABRE-202ENST00000417300 TMEM132EQ6IEE7 984 aa16.48■□□□□ 0.23
GABRE-202ENST00000417300 ZNF784Q8NCA9 323 aaPredicted RBP16.48■□□□□ 0.23
GABRE-202ENST00000417300 DLC1Q96QB1 1528 aa16.48■□□□□ 0.23
GABRE-202ENST00000417300 KNDC1Q76NI1 1749 aa16.48■□□□□ 0.23
GABRE-202ENST00000417300 ADAMTS13Q76LX8 1427 aa16.46■□□□□ 0.23
GABRE-202ENST00000417300 TMF1P82094 1093 aa16.46■□□□□ 0.23
GABRE-202ENST00000417300 CENPJQ9HC77 1338 aaPredicted RBP16.45■□□□□ 0.22
GABRE-202ENST00000417300 AMOTL2Q9Y2J4 779 aa16.45■□□□□ 0.22
GABRE-202ENST00000417300 LRPPRCP42704 1394 aaKnown RBP16.45■□□□□ 0.22
GABRE-202ENST00000417300 PIK3R4Q99570 1358 aa16.44■□□□□ 0.22
GABRE-202ENST00000417300 TRAK1Q9UPV9 953 aa16.44■□□□□ 0.22
GABRE-202ENST00000417300 SEPT12Q8IYM1 358 aa16.43■□□□□ 0.22
GABRE-202ENST00000417300 TECPR2O15040 1411 aa16.43■□□□□ 0.22
GABRE-202ENST00000417300 ABCC11Q96J66 1382 aa16.42■□□□□ 0.22
GABRE-202ENST00000417300 EN1Q05925 392 aaPredicted RBP16.42■□□□□ 0.22
GABRE-202ENST00000417300 CDCA8Q53HL2 280 aa16.42■□□□□ 0.22
GABRE-202ENST00000417300 KRT27Q7Z3Y8 459 aa16.41■□□□□ 0.22
GABRE-202ENST00000417300 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
GABRE-202ENST00000417300 METP08581 1390 aa16.4■□□□□ 0.22
GABRE-202ENST00000417300 UNC5CLQ8IV45 518 aa16.4■□□□□ 0.22
GABRE-202ENST00000417300 MIER1Q8N108 512 aa16.4■□□□□ 0.22
GABRE-202ENST00000417300 BRWD3Q6RI45 1802 aa16.4■□□□□ 0.22
GABRE-202ENST00000417300 CEP350Q5VT06 3117 aa16.39■□□□□ 0.21
GABRE-202ENST00000417300 MYOM1P52179 1685 aa16.39■□□□□ 0.21
GABRE-202ENST00000417300 SOS2Q07890 1332 aaPredicted RBP16.39■□□□□ 0.21
GABRE-202ENST00000417300 TULP4Q9NRJ4 1543 aa16.37■□□□□ 0.21
GABRE-202ENST00000417300 SIRT1Q96EB6 747 aa16.37■□□□□ 0.21
GABRE-202ENST00000417300 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
GABRE-202ENST00000417300 GLI3P10071 1580 aa16.37■□□□□ 0.21
GABRE-202ENST00000417300 STK26Q9P289 416 aa16.36■□□□□ 0.21
GABRE-202ENST00000417300 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
GABRE-202ENST00000417300 XRN1Q8IZH2 1706 aaKnown RBP16.35■□□□□ 0.21
GABRE-202ENST00000417300 ANP32CO43423 234 aa16.34■□□□□ 0.21
GABRE-202ENST00000417300 PRAM1Q96QH2 718 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms