RNA–Protein interactions for RNA: ENST00000416526.5

HMG20B-203, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-203ENST00000416526 SIRT1Q96EB6 747 aa31.95■■■□□ 2.71
HMG20B-203ENST00000416526 STAC3Q96MF2 364 aa31.95■■■□□ 2.71
HMG20B-203ENST00000416526 DDX17Q92841 729 aaKnown RBP31.94■■■□□ 2.7
HMG20B-203ENST00000416526 ORAI2Q96SN7 254 aa31.94■■■□□ 2.7
HMG20B-203ENST00000416526 PHF23Q9BUL5 403 aaPredicted RBP31.94■■■□□ 2.7
HMG20B-203ENST00000416526 SHPRHQ149N8 1683 aa31.9■■■□□ 2.7
HMG20B-203ENST00000416526 RGS17Q9UGC6 210 aaPredicted RBP31.89■■■□□ 2.7
HMG20B-203ENST00000416526 DLC1Q96QB1 1528 aa31.89■■■□□ 2.7
HMG20B-203ENST00000416526 PRAM1Q96QH2 718 aa31.86■■■□□ 2.69
HMG20B-203ENST00000416526 FMN2Q9NZ56 1722 aa31.85■■■□□ 2.69
HMG20B-203ENST00000416526 LRP6O75581 1613 aa31.85■■■□□ 2.69
HMG20B-203ENST00000416526 SPATA31A6Q5VVP1 1343 aa31.84■■■□□ 2.69
HMG20B-203ENST00000416526 NUTM2FA1L443 756 aa31.83■■■□□ 2.69
HMG20B-203ENST00000416526 TRIM26Q12899 539 aaPredicted RBP31.82■■■□□ 2.68
HMG20B-203ENST00000416526 SAFB2Q14151 953 aaKnown RBP eCLIP31.82■■■□□ 2.68
HMG20B-203ENST00000416526 TRAK1Q9UPV9 953 aa31.82■■■□□ 2.68
HMG20B-203ENST00000416526 ESCO1Q5FWF5 840 aa31.81■■■□□ 2.68
HMG20B-203ENST00000416526 LRRC59Q96AG4 307 aaKnown RBP31.81■■■□□ 2.68
HMG20B-203ENST00000416526 SIN3AQ96ST3 1273 aa31.81■■■□□ 2.68
HMG20B-203ENST00000416526 SOS2Q07890 1332 aaPredicted RBP31.79■■■□□ 2.68
HMG20B-203ENST00000416526 POGKQ9P215 609 aa31.79■■■□□ 2.68
HMG20B-203ENST00000416526 SOCS7O14512 581 aa31.76■■■□□ 2.67
HMG20B-203ENST00000416526 PNPLA6Q8IY17 1366 aa31.76■■■□□ 2.67
HMG20B-203ENST00000416526 KIAA1210Q9ULL0 1709 aa31.75■■■□□ 2.67
HMG20B-203ENST00000416526 L3MBTL2Q969R5 705 aa31.74■■■□□ 2.67
HMG20B-203ENST00000416526 ADGRB2O60241 1585 aa31.73■■■□□ 2.67
HMG20B-203ENST00000416526 RGPD8O14715 1765 aaPredicted RBP31.73■■■□□ 2.67
HMG20B-203ENST00000416526 ARHGEF28Q8N1W1 1705 aaKnown RBP31.72■■■□□ 2.67
HMG20B-203ENST00000416526 PXDNQ92626 1479 aa31.72■■■□□ 2.67
HMG20B-203ENST00000416526 NUTM2BA6NNL0 878 aaPredicted RBP31.71■■■□□ 2.67
HMG20B-203ENST00000416526 NUTM2EB1AL46 878 aaPredicted RBP31.71■■■□□ 2.67
HMG20B-203ENST00000416526 FOXO3O43524 673 aa31.71■■■□□ 2.67
HMG20B-203ENST00000416526 NUTM2AQ8IVF1 878 aaPredicted RBP31.71■■■□□ 2.67
HMG20B-203ENST00000416526 NPHP3Q7Z494 1330 aa31.71■■■□□ 2.67
HMG20B-203ENST00000416526 NEUROD1Q13562 356 aa31.7■■■□□ 2.67
HMG20B-203ENST00000416526 POTEAQ6S8J7 498 aa31.7■■■□□ 2.67
HMG20B-203ENST00000416526 NBPF1Q3BBV0 1214 aa31.69■■■□□ 2.66
HMG20B-203ENST00000416526 HIRIP3Q9BW71 556 aaPredicted RBP31.68■■■□□ 2.66
HMG20B-203ENST00000416526 MINK1Q8N4C8 1332 aaPredicted RBP31.68■■■□□ 2.66
HMG20B-203ENST00000416526 USP32Q8NFA0 1604 aa31.67■■■□□ 2.66
HMG20B-203ENST00000416526 KIF1AQ12756 1690 aa31.67■■■□□ 2.66
HMG20B-203ENST00000416526 XPCQ01831 940 aaPredicted RBP31.67■■■□□ 2.66
HMG20B-203ENST00000416526 MEX3CQ5U5Q3 659 aaKnown RBP31.67■■■□□ 2.66
HMG20B-203ENST00000416526 ANKARQ7Z5J8 1434 aa31.62■■■□□ 2.65
HMG20B-203ENST00000416526 PHF8Q9UPP1 1060 aa31.61■■■□□ 2.65
HMG20B-203ENST00000416526 COL22A1Q8NFW1 1626 aaPredicted RBP31.6■■■□□ 2.65
HMG20B-203ENST00000416526 WASLO00401 505 aaPredicted RBP31.59■■■□□ 2.65
HMG20B-203ENST00000416526 PRR36Q9H6K5 1346 aa31.58■■■□□ 2.65
HMG20B-203ENST00000416526 TULP4Q9NRJ4 1543 aa31.57■■■□□ 2.64
HMG20B-203ENST00000416526 KRT28Q7Z3Y7 464 aa31.55■■■□□ 2.64
HMG20B-203ENST00000416526 TRPM1Q7Z4N2 1603 aa31.55■■■□□ 2.64
HMG20B-203ENST00000416526 PMFBP1Q8TBY8 1022 aa31.54■■■□□ 2.64
HMG20B-203ENST00000416526 EIF3AQ14152 1382 aaKnown RBP31.54■■■□□ 2.64
HMG20B-203ENST00000416526 ZNF772Q68DY9 489 aaPredicted RBP31.53■■■□□ 2.64
HMG20B-203ENST00000416526 SPATA31A3Q5VYP0 1347 aa31.52■■■□□ 2.64
HMG20B-203ENST00000416526 ADAMTS2O95450 1211 aa31.52■■■□□ 2.64
HMG20B-203ENST00000416526 C8orf37Q96NL8 207 aa31.52■■■□□ 2.64
HMG20B-203ENST00000416526 AFF2P51816 1311 aa31.51■■■□□ 2.64
HMG20B-203ENST00000416526 ATP7BP35670 1465 aa31.48■■■□□ 2.63
HMG20B-203ENST00000416526 NBPF8Q3BBV2 869 aa31.47■■■□□ 2.63
HMG20B-203ENST00000416526 CDK19Q9BWU1 502 aa31.47■■■□□ 2.63
HMG20B-203ENST00000416526 PSME1Q06323 249 aa31.46■■■□□ 2.63
HMG20B-203ENST00000416526 TNS3Q68CZ2 1445 aa31.46■■■□□ 2.63
HMG20B-203ENST00000416526 NUDT16Q96DE0 195 aaKnown RBP31.45■■■□□ 2.63
HMG20B-203ENST00000416526 CENPJQ9HC77 1338 aaPredicted RBP31.45■■■□□ 2.62
HMG20B-203ENST00000416526 SBNO1A3KN83 1393 aa31.44■■■□□ 2.62
HMG20B-203ENST00000416526 NGLY1Q96IV0 654 aa31.43■■■□□ 2.62
HMG20B-203ENST00000416526 QRICH2Q9H0J4 1663 aa31.42■■■□□ 2.62
HMG20B-203ENST00000416526 ITSN1Q15811 1721 aa31.42■■■□□ 2.62
HMG20B-203ENST00000416526 TRPM3Q9HCF6 1732 aaPredicted RBP31.42■■■□□ 2.62
HMG20B-203ENST00000416526 ROCK2O75116 1388 aaKnown RBP31.42■■■□□ 2.62
HMG20B-203ENST00000416526 TONSLQ96HA7 1378 aa31.41■■■□□ 2.62
HMG20B-203ENST00000416526 MARF1Q9Y4F3 1742 aaKnown RBP31.41■■■□□ 2.62
HMG20B-203ENST00000416526 TOPAZ1Q8N9V7 1692 aa31.39■■■□□ 2.62
HMG20B-203ENST00000416526 FNBP4Q8N3X1 1017 aaPredicted RBP31.37■■■□□ 2.61
HMG20B-203ENST00000416526 NGDNQ8NEJ9 315 aaKnown RBP31.37■■■□□ 2.61
HMG20B-203ENST00000416526 GPRASP1Q5JY77 1395 aa31.36■■■□□ 2.61
HMG20B-203ENST00000416526 ARHGEF10O15013 1369 aa31.35■■■□□ 2.61
HMG20B-203ENST00000416526 RXRBP28702 533 aa31.35■■■□□ 2.61
HMG20B-203ENST00000416526 QTRT2Q9H974 415 aaKnown RBP31.35■■■□□ 2.61
HMG20B-203ENST00000416526 ALS2Q96Q42 1657 aa31.35■■■□□ 2.61
HMG20B-203ENST00000416526 LMOD2Q6P5Q4 547 aa31.34■■■□□ 2.61
HMG20B-203ENST00000416526 CABLES1Q8TDN4 633 aa31.34■■■□□ 2.61
HMG20B-203ENST00000416526 ABCA3Q99758 1704 aa31.33■■■□□ 2.61
HMG20B-203ENST00000416526 CCDC61Q9Y6R9 512 aa31.33■■■□□ 2.61
HMG20B-203ENST00000416526 USP21Q9UK80 565 aa31.32■■■□□ 2.6
HMG20B-203ENST00000416526 PLEKHG5O94827 1062 aa31.31■■■□□ 2.6
HMG20B-203ENST00000416526 CABP2Q9NPB3 220 aa31.31■■■□□ 2.6
HMG20B-203ENST00000416526 SRPK2P78362 688 aaKnown RBP31.3■■■□□ 2.6
HMG20B-203ENST00000416526 POLR3AO14802 1390 aaPredicted RBP31.3■■■□□ 2.6
HMG20B-203ENST00000416526 RALGAPBQ86X10 1494 aa31.29■■■□□ 2.6
HMG20B-203ENST00000416526 PLEKHG3A1L390 1219 aa31.29■■■□□ 2.6
HMG20B-203ENST00000416526 BCL9LQ86UU0 1499 aa31.28■■■□□ 2.6
HMG20B-203ENST00000416526 ACEP12821 1306 aa31.27■■■□□ 2.6
HMG20B-203ENST00000416526 PCGF6Q9BYE7 350 aa31.27■■■□□ 2.6
HMG20B-203ENST00000416526 CDK12Q9NYV4 1490 aaPredicted RBP31.27■■■□□ 2.6
HMG20B-203ENST00000416526 RBM6P78332 1123 aaKnown RBP31.26■■■□□ 2.59
HMG20B-203ENST00000416526 ATRNO75882 1429 aa31.25■■■□□ 2.59
HMG20B-203ENST00000416526 PPIP5K1Q6PFW1 1433 aa31.24■■■□□ 2.59
HMG20B-203ENST00000416526 PAK3O75914 559 aaPredicted RBP31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms