RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 WAPLQ7Z5K2 1190 aa25.92■■□□□ 1.74
SEMA3B-201ENST00000416295 MST1RQ04912 1400 aa25.91■■□□□ 1.74
SEMA3B-201ENST00000416295 TONSLQ96HA7 1378 aa25.9■■□□□ 1.74
SEMA3B-201ENST00000416295 PLEKHH1Q9ULM0 1364 aa25.9■■□□□ 1.74
SEMA3B-201ENST00000416295 CDC42BPGQ6DT37 1551 aa25.89■■□□□ 1.73
SEMA3B-201ENST00000416295 PRAM1Q96QH2 718 aa25.88■■□□□ 1.73
SEMA3B-201ENST00000416295 PHLPP1O60346 1717 aa25.88■■□□□ 1.73
SEMA3B-201ENST00000416295 TRAK1Q9UPV9 953 aa25.87■■□□□ 1.73
SEMA3B-201ENST00000416295 POGKQ9P215 609 aa25.86■■□□□ 1.73
SEMA3B-201ENST00000416295 CLSPNQ9HAW4 1339 aa25.86■■□□□ 1.73
SEMA3B-201ENST00000416295 BRINP3Q76B58 766 aa25.83■■□□□ 1.73
SEMA3B-201ENST00000416295 C1orf167Q5SNV9 1468 aa25.83■■□□□ 1.73
SEMA3B-201ENST00000416295 JCADQ9P266 1359 aa25.82■■□□□ 1.72
SEMA3B-201ENST00000416295 SAFB2Q14151 953 aaKnown RBP eCLIP25.81■■□□□ 1.72
SEMA3B-201ENST00000416295 NBPF1Q3BBV0 1214 aa25.81■■□□□ 1.72
SEMA3B-201ENST00000416295 COL16A1Q07092 1604 aaPredicted RBP25.79■■□□□ 1.72
SEMA3B-201ENST00000416295 AHDC1Q5TGY3 1603 aaPredicted RBP25.79■■□□□ 1.72
SEMA3B-201ENST00000416295 TRPM1Q7Z4N2 1603 aa25.78■■□□□ 1.72
SEMA3B-201ENST00000416295 ARHGEF28Q8N1W1 1705 aaKnown RBP25.77■■□□□ 1.72
SEMA3B-201ENST00000416295 ADGRB2O60241 1585 aa25.77■■□□□ 1.72
SEMA3B-201ENST00000416295 ROCK2O75116 1388 aaKnown RBP25.76■■□□□ 1.71
SEMA3B-201ENST00000416295 FMN2Q9NZ56 1722 aa25.74■■□□□ 1.71
SEMA3B-201ENST00000416295 NBPF8Q3BBV2 869 aa25.73■■□□□ 1.71
SEMA3B-201ENST00000416295 CCER1Q8TC90 406 aaPredicted RBP25.73■■□□□ 1.71
SEMA3B-201ENST00000416295 RGS17Q9UGC6 210 aaPredicted RBP25.73■■□□□ 1.71
SEMA3B-201ENST00000416295 SPATA31A6Q5VVP1 1343 aa25.72■■□□□ 1.71
SEMA3B-201ENST00000416295 MINK1Q8N4C8 1332 aaPredicted RBP25.72■■□□□ 1.71
SEMA3B-201ENST00000416295 ORAI2Q96SN7 254 aa25.72■■□□□ 1.71
SEMA3B-201ENST00000416295 NHSL1Q5SYE7 1610 aa25.71■■□□□ 1.71
SEMA3B-201ENST00000416295 ESCO1Q5FWF5 840 aa25.71■■□□□ 1.71
SEMA3B-201ENST00000416295 EIF3AQ14152 1382 aaKnown RBP25.7■■□□□ 1.71
SEMA3B-201ENST00000416295 NUTM2FA1L443 756 aa25.7■■□□□ 1.7
SEMA3B-201ENST00000416295 HIRIP3Q9BW71 556 aaPredicted RBP25.7■■□□□ 1.7
SEMA3B-201ENST00000416295 TIMELESSQ9UNS1 1208 aa25.69■■□□□ 1.7
SEMA3B-201ENST00000416295 GPRASP1Q5JY77 1395 aa25.69■■□□□ 1.7
SEMA3B-201ENST00000416295 SHPRHQ149N8 1683 aa25.68■■□□□ 1.7
SEMA3B-201ENST00000416295 RALGAPBQ86X10 1494 aa25.68■■□□□ 1.7
SEMA3B-201ENST00000416295 ANKARQ7Z5J8 1434 aa25.68■■□□□ 1.7
SEMA3B-201ENST00000416295 CENPJQ9HC77 1338 aaPredicted RBP25.66■■□□□ 1.7
SEMA3B-201ENST00000416295 WASLO00401 505 aaPredicted RBP25.66■■□□□ 1.7
SEMA3B-201ENST00000416295 NPHP3Q7Z494 1330 aa25.64■■□□□ 1.7
SEMA3B-201ENST00000416295 DDX17Q92841 729 aaKnown RBP25.64■■□□□ 1.7
SEMA3B-201ENST00000416295 TULP4Q9NRJ4 1543 aa25.63■■□□□ 1.69
SEMA3B-201ENST00000416295 KIF1AQ12756 1690 aa25.63■■□□□ 1.69
SEMA3B-201ENST00000416295 LRRC59Q96AG4 307 aaKnown RBP25.62■■□□□ 1.69
SEMA3B-201ENST00000416295 CARD11Q9BXL7 1154 aa25.62■■□□□ 1.69
SEMA3B-201ENST00000416295 SOS2Q07890 1332 aaPredicted RBP25.62■■□□□ 1.69
SEMA3B-201ENST00000416295 MEX3CQ5U5Q3 659 aaKnown RBP25.61■■□□□ 1.69
SEMA3B-201ENST00000416295 POTEAQ6S8J7 498 aa25.6■■□□□ 1.69
SEMA3B-201ENST00000416295 PHF8Q9UPP1 1060 aa25.6■■□□□ 1.69
SEMA3B-201ENST00000416295 LRP6O75581 1613 aa25.59■■□□□ 1.69
SEMA3B-201ENST00000416295 USP32Q8NFA0 1604 aa25.59■■□□□ 1.69
SEMA3B-201ENST00000416295 FOXO3O43524 673 aa25.59■■□□□ 1.69
SEMA3B-201ENST00000416295 QRICH2Q9H0J4 1663 aa25.58■■□□□ 1.69
SEMA3B-201ENST00000416295 CDK19Q9BWU1 502 aa25.57■■□□□ 1.68
SEMA3B-201ENST00000416295 PRR36Q9H6K5 1346 aa25.56■■□□□ 1.68
SEMA3B-201ENST00000416295 PXDNQ92626 1479 aa25.55■■□□□ 1.68
SEMA3B-201ENST00000416295 RGPD8O14715 1765 aaPredicted RBP25.55■■□□□ 1.68
SEMA3B-201ENST00000416295 ATP7BP35670 1465 aa25.54■■□□□ 1.68
SEMA3B-201ENST00000416295 ZNF772Q68DY9 489 aaPredicted RBP25.54■■□□□ 1.68
SEMA3B-201ENST00000416295 NUDT16Q96DE0 195 aaKnown RBP25.53■■□□□ 1.68
SEMA3B-201ENST00000416295 PNPLA6Q8IY17 1366 aa25.53■■□□□ 1.68
SEMA3B-201ENST00000416295 SRPK2P78362 688 aaKnown RBP25.51■■□□□ 1.67
SEMA3B-201ENST00000416295 XPCQ01831 940 aaPredicted RBP25.51■■□□□ 1.67
SEMA3B-201ENST00000416295 PMFBP1Q8TBY8 1022 aa25.51■■□□□ 1.67
SEMA3B-201ENST00000416295 ITSN1Q15811 1721 aa25.51■■□□□ 1.67
SEMA3B-201ENST00000416295 EVC2Q86UK5 1308 aa25.5■■□□□ 1.67
SEMA3B-201ENST00000416295 SBNO2Q9Y2G9 1366 aa25.5■■□□□ 1.67
SEMA3B-201ENST00000416295 NUTM2BA6NNL0 878 aaPredicted RBP25.49■■□□□ 1.67
SEMA3B-201ENST00000416295 NUTM2EB1AL46 878 aaPredicted RBP25.49■■□□□ 1.67
SEMA3B-201ENST00000416295 PSME1Q06323 249 aa25.49■■□□□ 1.67
SEMA3B-201ENST00000416295 KRT28Q7Z3Y7 464 aa25.49■■□□□ 1.67
SEMA3B-201ENST00000416295 NUTM2AQ8IVF1 878 aaPredicted RBP25.49■■□□□ 1.67
SEMA3B-201ENST00000416295 CCDC61Q9Y6R9 512 aa25.49■■□□□ 1.67
SEMA3B-201ENST00000416295 NGDNQ8NEJ9 315 aaKnown RBP25.46■■□□□ 1.67
SEMA3B-201ENST00000416295 CABP2Q9NPB3 220 aa25.45■■□□□ 1.66
SEMA3B-201ENST00000416295 TOPAZ1Q8N9V7 1692 aa25.45■■□□□ 1.66
SEMA3B-201ENST00000416295 SBNO1A3KN83 1393 aa25.44■■□□□ 1.66
SEMA3B-201ENST00000416295 SPATA31A3Q5VYP0 1347 aa25.44■■□□□ 1.66
SEMA3B-201ENST00000416295 TNS3Q68CZ2 1445 aa25.43■■□□□ 1.66
SEMA3B-201ENST00000416295 COL22A1Q8NFW1 1626 aaPredicted RBP25.42■■□□□ 1.66
SEMA3B-201ENST00000416295 PPIP5K1Q6PFW1 1433 aa25.41■■□□□ 1.66
SEMA3B-201ENST00000416295 PLEKHG3A1L390 1219 aa25.41■■□□□ 1.66
SEMA3B-201ENST00000416295 POLR3AO14802 1390 aaPredicted RBP25.41■■□□□ 1.66
SEMA3B-201ENST00000416295 USP47Q96K76 1375 aa25.4■■□□□ 1.66
SEMA3B-201ENST00000416295 SLC24A1O60721 1099 aa25.39■■□□□ 1.66
SEMA3B-201ENST00000416295 ARHGEF10O15013 1369 aa25.39■■□□□ 1.65
SEMA3B-201ENST00000416295 AFF2P51816 1311 aa25.38■■□□□ 1.65
SEMA3B-201ENST00000416295 ST20-MTHFSA0A0A6YYL1 179 aa25.38■■□□□ 1.65
SEMA3B-201ENST00000416295 ATAD2Q6PL18 1390 aa25.38■■□□□ 1.65
SEMA3B-201ENST00000416295 ACEP12821 1306 aa25.37■■□□□ 1.65
SEMA3B-201ENST00000416295 RXRBP28702 533 aa25.36■■□□□ 1.65
SEMA3B-201ENST00000416295 C8orf37Q96NL8 207 aa25.36■■□□□ 1.65
SEMA3B-201ENST00000416295 TRPM3Q9HCF6 1732 aaPredicted RBP25.36■■□□□ 1.65
SEMA3B-201ENST00000416295 LMOD2Q6P5Q4 547 aa25.35■■□□□ 1.65
SEMA3B-201ENST00000416295 TESK2Q96S53 571 aa25.34■■□□□ 1.65
SEMA3B-201ENST00000416295 CABP1Q9NZU7 370 aa25.34■■□□□ 1.65
SEMA3B-201ENST00000416295 CDK12Q9NYV4 1490 aaPredicted RBP25.34■■□□□ 1.65
SEMA3B-201ENST00000416295 PAK3O75914 559 aaPredicted RBP25.32■■□□□ 1.64
SEMA3B-201ENST00000416295 ADAMTS2O95450 1211 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms