RNA–Protein interactions for RNA: ENST00000416135.5

RAD50-202, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-202ENST00000416135 GMPR2Q9P2T1 348 aaKnown RBP11.98□□□□□ -0.49
RAD50-202ENST00000416135 TREML4Q6UXN2 200 aa11.97□□□□□ -0.49
RAD50-202ENST00000416135 WNT7AO00755 349 aa11.96□□□□□ -0.49
RAD50-202ENST00000416135 SMCPP49901 116 aaPredicted RBP11.96□□□□□ -0.49
RAD50-202ENST00000416135 TRIM32Q13049 653 aa11.96□□□□□ -0.49
RAD50-202ENST00000416135 GRIPAP1Q4V328 841 aa11.96□□□□□ -0.49
RAD50-202ENST00000416135 IRF6O14896 467 aa11.95□□□□□ -0.5
RAD50-202ENST00000416135 AXIN1O15169 862 aa11.95□□□□□ -0.5
RAD50-202ENST00000416135 KDM4AO75164 1064 aa11.95□□□□□ -0.5
RAD50-202ENST00000416135 DXOO77932 396 aaKnown RBP11.95□□□□□ -0.5
RAD50-202ENST00000416135 SMPD1P17405 629 aa11.95□□□□□ -0.5
RAD50-202ENST00000416135 HAP1P54257 671 aaPredicted RBP11.94□□□□□ -0.5
RAD50-202ENST00000416135 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
RAD50-202ENST00000416135 CTC1Q2NKJ3 1217 aa11.94□□□□□ -0.5
RAD50-202ENST00000416135 Q3C1V9 767 aa11.94□□□□□ -0.5
RAD50-202ENST00000416135 ZBTB24O43167 697 aaPredicted RBP11.93□□□□□ -0.5
RAD50-202ENST00000416135 MRGPRX2Q96LB1 330 aa11.93□□□□□ -0.5
RAD50-202ENST00000416135 USB1Q9BQ65 265 aaKnown RBP11.93□□□□□ -0.5
RAD50-202ENST00000416135 TTC24A2A3L6 582 aaPredicted RBP11.91□□□□□ -0.5
RAD50-202ENST00000416135 J3QL48 77 aa11.9□□□□□ -0.5
RAD50-202ENST00000416135 HOXA2O43364 376 aa11.9□□□□□ -0.5
RAD50-202ENST00000416135 GUCA2AQ02747 115 aa11.9□□□□□ -0.5
RAD50-202ENST00000416135 SNIP1Q8TAD8 396 aaKnown RBP11.9□□□□□ -0.5
RAD50-202ENST00000416135 C11orf95C9JLR9 678 aaPredicted RBP11.88□□□□□ -0.51
RAD50-202ENST00000416135 SKOR1P84550 965 aa11.88□□□□□ -0.51
RAD50-202ENST00000416135 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
RAD50-202ENST00000416135 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
RAD50-202ENST00000416135 USP46P62068 366 aa11.86□□□□□ -0.51
RAD50-202ENST00000416135 NFX1Q12986 1120 aaKnown RBP11.85□□□□□ -0.51
RAD50-202ENST00000416135 LCE2CQ5TA81 110 aa11.85□□□□□ -0.51
RAD50-202ENST00000416135 SYMPKQ92797 1274 aaKnown RBP11.85□□□□□ -0.51
RAD50-202ENST00000416135 HPS1Q92902 700 aa11.85□□□□□ -0.51
RAD50-202ENST00000416135 ATP13A2Q9NQ11 1180 aa11.85□□□□□ -0.51
RAD50-202ENST00000416135 FAM217BQ9NTX9 383 aaPredicted RBP11.84□□□□□ -0.51
RAD50-202ENST00000416135 SNRPBP14678 240 aaKnown RBP11.83□□□□□ -0.52
RAD50-202ENST00000416135 RC3H1Q5TC82 1133 aaKnown RBP11.82□□□□□ -0.52
RAD50-202ENST00000416135 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
RAD50-202ENST00000416135 WFS1O76024 890 aa11.81□□□□□ -0.52
RAD50-202ENST00000416135 JUNDP17535 347 aa11.81□□□□□ -0.52
RAD50-202ENST00000416135 REPIN1Q9BWE0 567 aaKnown RBP11.81□□□□□ -0.52
RAD50-202ENST00000416135 GPCPD1Q9NPB8 672 aa11.81□□□□□ -0.52
RAD50-202ENST00000416135 PTCRAQ6ISU1 281 aaPredicted RBP11.8□□□□□ -0.52
RAD50-202ENST00000416135 WNT7BP56706 349 aa11.79□□□□□ -0.52
RAD50-202ENST00000416135 TRIM47Q96LD4 638 aa11.78□□□□□ -0.52
RAD50-202ENST00000416135 PCDHGC3Q9UN70 934 aa11.78□□□□□ -0.52
RAD50-202ENST00000416135 CLCN1P35523 988 aa11.77□□□□□ -0.53
RAD50-202ENST00000416135 RETREG3Q86VR2 466 aa11.75□□□□□ -0.53
RAD50-202ENST00000416135 SIAH2O43255 324 aa11.74□□□□□ -0.53
RAD50-202ENST00000416135 WIPF1O43516 503 aa11.73□□□□□ -0.53
RAD50-202ENST00000416135 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
RAD50-202ENST00000416135 TULP1O00294 542 aaPredicted RBP11.71□□□□□ -0.53
RAD50-202ENST00000416135 ALDH1A1P00352 501 aa11.71□□□□□ -0.53
RAD50-202ENST00000416135 FDX1P10109 184 aa11.71□□□□□ -0.53
RAD50-202ENST00000416135 VSIG10Q8N0Z9 540 aa11.71□□□□□ -0.53
RAD50-202ENST00000416135 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.7□□□□□ -0.54
RAD50-202ENST00000416135 NUTM1Q86Y26 1132 aa11.7□□□□□ -0.54
RAD50-202ENST00000416135 TERTO14746 1132 aaKnown RBP11.69□□□□□ -0.54
RAD50-202ENST00000416135 SPIRE2Q8WWL2 714 aa11.69□□□□□ -0.54
RAD50-202ENST00000416135 SENP2Q9HC62 589 aa11.69□□□□□ -0.54
RAD50-202ENST00000416135 SH3BP2P78314 561 aa11.68□□□□□ -0.54
RAD50-202ENST00000416135 NDUFV2P19404 249 aa11.67□□□□□ -0.54
RAD50-202ENST00000416135 C6orf229H3BNL8 230 aa11.66□□□□□ -0.54
RAD50-202ENST00000416135 SSTR3P32745 418 aaPredicted RBP11.66□□□□□ -0.54
RAD50-202ENST00000416135 TRIM46Q7Z4K8 759 aa11.66□□□□□ -0.54
RAD50-202ENST00000416135 EHBP1Q8NDI1 1231 aa11.66□□□□□ -0.54
RAD50-202ENST00000416135 MOXD2PA6NHM9 499 aa11.65□□□□□ -0.54
RAD50-202ENST00000416135 CCNYL3P0C7X3 344 aa11.65□□□□□ -0.54
RAD50-202ENST00000416135 MS4A1P11836 297 aa11.65□□□□□ -0.54
RAD50-202ENST00000416135 BMP1P13497 986 aa11.65□□□□□ -0.54
RAD50-202ENST00000416135 KIFC2Q96AC6 838 aa11.64□□□□□ -0.55
RAD50-202ENST00000416135 UNC93B1Q9H1C4 597 aa11.63□□□□□ -0.55
RAD50-202ENST00000416135 PTPRNQ16849 979 aa11.62□□□□□ -0.55
RAD50-202ENST00000416135 KRI1Q8N9T8 703 aaKnown RBP11.62□□□□□ -0.55
RAD50-202ENST00000416135 EVA1BQ9NVM1 165 aa11.62□□□□□ -0.55
RAD50-202ENST00000416135 STK17AQ9UEE5 414 aa11.61□□□□□ -0.55
RAD50-202ENST00000416135 TLL2Q9Y6L7 1015 aa11.61□□□□□ -0.55
RAD50-202ENST00000416135 AMHR2Q16671 573 aa11.6□□□□□ -0.55
RAD50-202ENST00000416135 LINC01559Q495D7 138 aa11.6□□□□□ -0.55
RAD50-202ENST00000416135 BARGINQ6ZT62 677 aa11.6□□□□□ -0.55
RAD50-202ENST00000416135 ZMYND10O75800 440 aa11.59□□□□□ -0.55
RAD50-202ENST00000416135 PRR7Q8TB68 274 aa11.59□□□□□ -0.55
RAD50-202ENST00000416135 BAP1Q92560 729 aa11.59□□□□□ -0.55
RAD50-202ENST00000416135 CAPN5O15484 640 aaPredicted RBP11.58□□□□□ -0.56
RAD50-202ENST00000416135 INSM1Q01101 510 aaPredicted RBP11.58□□□□□ -0.56
RAD50-202ENST00000416135 KCNH2Q12809 1159 aa11.58□□□□□ -0.56
RAD50-202ENST00000416135 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
RAD50-202ENST00000416135 WASF2Q9Y6W5 498 aa11.57□□□□□ -0.56
RAD50-202ENST00000416135 TTLL12Q14166 644 aaPredicted RBP11.56□□□□□ -0.56
RAD50-202ENST00000416135 ZNF511Q8NB15 262 aa11.56□□□□□ -0.56
RAD50-202ENST00000416135 MTMR2Q13614 643 aa11.55□□□□□ -0.56
RAD50-202ENST00000416135 DESI1Q6ICB0 168 aa11.55□□□□□ -0.56
RAD50-202ENST00000416135 LORP23490 312 aaPredicted RBP11.54□□□□□ -0.56
RAD50-202ENST00000416135 NXF1Q9UBU9 619 aaKnown RBP11.54□□□□□ -0.56
RAD50-202ENST00000416135 ZC3H15Q8WU90 426 aaKnown RBP11.53□□□□□ -0.56
RAD50-202ENST00000416135 BEGAINQ9BUH8 593 aa11.53□□□□□ -0.56
RAD50-202ENST00000416135 PCDHB15Q9Y5E8 787 aa11.52□□□□□ -0.57
RAD50-202ENST00000416135 CFAP99D6REC4 459 aa11.51□□□□□ -0.57
RAD50-202ENST00000416135 VEGFBP49765 207 aa11.51□□□□□ -0.57
RAD50-202ENST00000416135 RSBN1LQ6PCB5 846 aaPredicted RBP11.51□□□□□ -0.57
RAD50-202ENST00000416135 MPNDQ8N594 471 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms